RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
KDM3B-208ENST00000512928 CARD11Q9BXL7 1154 aa9.26□□□□□ -0.93
KDM3B-208ENST00000512928 TRPC5Q9UL62 973 aaPredicted RBP9.26□□□□□ -0.93
KDM3B-208ENST00000512928 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.25□□□□□ -0.93
KDM3B-208ENST00000512928 PPIP5K1Q6PFW1 1433 aa9.25□□□□□ -0.93
KDM3B-208ENST00000512928 DEFB132Q7Z7B7 95 aa9.25□□□□□ -0.93
KDM3B-208ENST00000512928 FNBP4Q8N3X1 1017 aaPredicted RBP9.25□□□□□ -0.93
KDM3B-208ENST00000512928 CCDC9Q9Y3X0 531 aaKnown RBP9.25□□□□□ -0.93
KDM3B-208ENST00000512928 CCDC61Q9Y6R9 512 aa9.25□□□□□ -0.93
KDM3B-208ENST00000512928 TOPAZ1Q8N9V7 1692 aa9.25□□□□□ -0.93
KDM3B-208ENST00000512928 ACEP12821 1306 aa9.25□□□□□ -0.93
KDM3B-208ENST00000512928 TRPM3Q9HCF6 1732 aaPredicted RBP9.25□□□□□ -0.93
KDM3B-208ENST00000512928 RALGAPBQ86X10 1494 aa9.24□□□□□ -0.93
KDM3B-208ENST00000512928 EP400Q96L91 3159 aa9.24□□□□□ -0.93
KDM3B-208ENST00000512928 NUTM2GQ5VZR2 741 aa9.24□□□□□ -0.93
KDM3B-208ENST00000512928 EVC2Q86UK5 1308 aa9.24□□□□□ -0.93
KDM3B-208ENST00000512928 CLSPNQ9HAW4 1339 aa9.24□□□□□ -0.93
KDM3B-208ENST00000512928 ALS2Q96Q42 1657 aa9.23□□□□□ -0.93
KDM3B-208ENST00000512928 SLIT2O94813 1529 aa9.22□□□□□ -0.93
KDM3B-208ENST00000512928 UNC5CLQ8IV45 518 aa9.22□□□□□ -0.93
KDM3B-208ENST00000512928 CABP1Q9NZU7 370 aa9.22□□□□□ -0.93
KDM3B-208ENST00000512928 POLR3AO14802 1390 aaPredicted RBP9.22□□□□□ -0.93
KDM3B-208ENST00000512928 A0A0G2JS52 829 aa9.21□□□□□ -0.94
KDM3B-208ENST00000512928 MYT1Q01538 1121 aa9.21□□□□□ -0.94
KDM3B-208ENST00000512928 ABTB2Q8N961 1025 aa9.21□□□□□ -0.94
KDM3B-208ENST00000512928 GJD4Q96KN9 370 aaPredicted RBP9.21□□□□□ -0.94
KDM3B-208ENST00000512928 NRAPQ86VF7 1730 aa9.21□□□□□ -0.94
KDM3B-208ENST00000512928 SRCAPQ6ZRS2 3230 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 PLEKHG3A1L390 1219 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 FAM83GA6ND36 823 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 FAM182BQ5T319 152 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 PRDM11Q9NQV5 511 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 BTG4Q9NY30 223 aa9.2□□□□□ -0.94
KDM3B-208ENST00000512928 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
KDM3B-208ENST00000512928 PSDA5PKW4 1024 aaPredicted RBP9.19□□□□□ -0.94
KDM3B-208ENST00000512928 ZC3H6P61129 1189 aaKnown RBP9.19□□□□□ -0.94
KDM3B-208ENST00000512928 CCER1Q8TC90 406 aaPredicted RBP9.19□□□□□ -0.94
KDM3B-208ENST00000512928 COL14A1Q05707 1796 aaKnown RBP9.19□□□□□ -0.94
KDM3B-208ENST00000512928 USP6P35125 1406 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 CHRNA2Q15822 529 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 TMC1Q8TDI8 760 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 KIAA0232Q92628 1395 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 ZRANB1Q9UGI0 708 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 NWD2Q9ULI1 1742 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
KDM3B-208ENST00000512928 NLRP6P59044 892 aa9.17□□□□□ -0.94
KDM3B-208ENST00000512928 VPS72Q15906 364 aa9.17□□□□□ -0.94
KDM3B-208ENST00000512928 NLRP13Q86W25 1043 aa9.17□□□□□ -0.94
KDM3B-208ENST00000512928 SEPT12Q8IYM1 358 aa9.17□□□□□ -0.94
KDM3B-208ENST00000512928 STRN4Q9NRL3 753 aa9.17□□□□□ -0.94
KDM3B-208ENST00000512928 TNS1Q9HBL0 1735 aaKnown RBP9.17□□□□□ -0.94
KDM3B-208ENST00000512928 NRKQ7Z2Y5 1582 aa9.16□□□□□ -0.94
KDM3B-208ENST00000512928 BLMP54132 1417 aaPredicted RBP9.16□□□□□ -0.94
KDM3B-208ENST00000512928 KTN1Q86UP2 1357 aaKnown RBP9.16□□□□□ -0.94
KDM3B-208ENST00000512928 SOX12O15370 315 aa9.16□□□□□ -0.94
KDM3B-208ENST00000512928 SBNO2Q9Y2G9 1366 aa9.15□□□□□ -0.94
KDM3B-208ENST00000512928 ST20-MTHFSA0A0A6YYL1 179 aa9.15□□□□□ -0.94
KDM3B-208ENST00000512928 EVA1CP58658 441 aa9.15□□□□□ -0.94
KDM3B-208ENST00000512928 FAM98CQ17RN3 349 aaKnown RBP9.15□□□□□ -0.94
KDM3B-208ENST00000512928 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.15□□□□□ -0.94
KDM3B-208ENST00000512928 LRP5O75197 1615 aa9.15□□□□□ -0.94
KDM3B-208ENST00000512928 BRD4O60885 1362 aaPredicted RBP9.14□□□□□ -0.95
KDM3B-208ENST00000512928 USP47Q96K76 1375 aa9.14□□□□□ -0.95
KDM3B-208ENST00000512928 PIK3C2AO00443 1686 aa9.14□□□□□ -0.95
KDM3B-208ENST00000512928 GCP02774 474 aa9.14□□□□□ -0.95
KDM3B-208ENST00000512928 HDGFL2Q7Z4V5 671 aaPredicted RBP9.14□□□□□ -0.95
KDM3B-208ENST00000512928 ZNF692Q9BU19 519 aaPredicted RBP9.14□□□□□ -0.95
KDM3B-208ENST00000512928 USP35Q9P2H5 1018 aa9.14□□□□□ -0.95
KDM3B-208ENST00000512928 AKAP12Q02952 1782 aa9.14□□□□□ -0.95
KDM3B-208ENST00000512928 USP19O94966 1318 aa9.13□□□□□ -0.95
KDM3B-208ENST00000512928 TTC21BQ7Z4L5 1316 aa9.13□□□□□ -0.95
KDM3B-208ENST00000512928 THSD7AQ9UPZ6 1657 aa9.13□□□□□ -0.95
KDM3B-208ENST00000512928 SLC12A5Q9H2X9 1139 aa9.12□□□□□ -0.95
KDM3B-208ENST00000512928 TERF2IPQ9NYB0 399 aa9.12□□□□□ -0.95
KDM3B-208ENST00000512928 CPSF1Q10570 1443 aaKnown RBP9.12□□□□□ -0.95
KDM3B-208ENST00000512928 RGPD1P0DJD0 1748 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 MON2Q7Z3U7 1717 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 SPATA31A5Q5VU36 1347 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 SPATA31A7Q8IWB4 1347 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 TTC21AQ8NDW8 1320 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 TMF1P82094 1093 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 EN1Q05925 392 aaPredicted RBP9.11□□□□□ -0.95
KDM3B-208ENST00000512928 KRT27Q7Z3Y8 459 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 SSH2Q76I76 1423 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 CPDO75976 1380 aa9.11□□□□□ -0.95
KDM3B-208ENST00000512928 SLIT3O75094 1523 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 SPATA31A1Q5TZJ5 1347 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 SLC24A1O60721 1099 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 SF3B2Q13435 895 aaKnown RBP9.1□□□□□ -0.95
KDM3B-208ENST00000512928 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
KDM3B-208ENST00000512928 NME9Q86XW9 330 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 KCNH5Q8NCM2 988 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 TESK2Q96S53 571 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 A0A1W2PP64 1363 aa9.1□□□□□ -0.95
KDM3B-208ENST00000512928 CD163L1Q9NR16 1453 aa9.09□□□□□ -0.95
KDM3B-208ENST00000512928 CSB-PGBD3P0DP91 1061 aa9.09□□□□□ -0.95
KDM3B-208ENST00000512928 POLR3GLQ9BT43 218 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms