RNA–Protein interactions for RNA: ENST00000512522.1

PDGFRA-210, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-210ENST00000512522 SSH2Q76I76 1423 aa13.63□□□□□ -0.23
PDGFRA-210ENST00000512522 ACEP12821 1306 aa13.63□□□□□ -0.23
PDGFRA-210ENST00000512522 LTBP4Q8N2S1 1624 aa13.62□□□□□ -0.23
PDGFRA-210ENST00000512522 CC2D1BQ5T0F9 858 aaKnown RBP13.62□□□□□ -0.23
PDGFRA-210ENST00000512522 EDC4Q6P2E9 1401 aaKnown RBP13.62□□□□□ -0.23
PDGFRA-210ENST00000512522 CGNL1Q0VF96 1302 aa13.62□□□□□ -0.23
PDGFRA-210ENST00000512522 NSD2O96028 1365 aa13.61□□□□□ -0.23
PDGFRA-210ENST00000512522 MST1RQ04912 1400 aa13.61□□□□□ -0.23
PDGFRA-210ENST00000512522 C1orf167Q5SNV9 1468 aa13.61□□□□□ -0.23
PDGFRA-210ENST00000512522 MSH6P52701 1360 aa13.6□□□□□ -0.23
PDGFRA-210ENST00000512522 FYB1O15117 783 aa13.6□□□□□ -0.23
PDGFRA-210ENST00000512522 USP6P35125 1406 aa13.6□□□□□ -0.23
PDGFRA-210ENST00000512522 CADPS2Q86UW7 1296 aa13.6□□□□□ -0.23
PDGFRA-210ENST00000512522 NRKQ7Z2Y5 1582 aa13.59□□□□□ -0.23
PDGFRA-210ENST00000512522 ATF3P18847 181 aa13.59□□□□□ -0.23
PDGFRA-210ENST00000512522 PMFBP1Q8TBY8 1022 aa13.59□□□□□ -0.23
PDGFRA-210ENST00000512522 PHF8Q9UPP1 1060 aa13.59□□□□□ -0.23
PDGFRA-210ENST00000512522 MYBBP1AQ9BQG0 1328 aaKnown RBP13.59□□□□□ -0.23
PDGFRA-210ENST00000512522 CCDC184Q52MB2 194 aa13.58□□□□□ -0.24
PDGFRA-210ENST00000512522 ORAI2Q96SN7 254 aa13.57□□□□□ -0.24
PDGFRA-210ENST00000512522 TTC21BQ7Z4L5 1316 aa13.57□□□□□ -0.24
PDGFRA-210ENST00000512522 BRD4O60885 1362 aaPredicted RBP13.57□□□□□ -0.24
PDGFRA-210ENST00000512522 PPP2R1AP30153 589 aa13.56□□□□□ -0.24
PDGFRA-210ENST00000512522 CNGB1Q14028 1251 aaPredicted RBP13.56□□□□□ -0.24
PDGFRA-210ENST00000512522 ESCO1Q5FWF5 840 aa13.56□□□□□ -0.24
PDGFRA-210ENST00000512522 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
PDGFRA-210ENST00000512522 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
PDGFRA-210ENST00000512522 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
PDGFRA-210ENST00000512522 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
PDGFRA-210ENST00000512522 KIF1AQ12756 1690 aa13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 CAPN15O75808 1086 aa13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 NME9Q86XW9 330 aa13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
PDGFRA-210ENST00000512522 USP31Q70CQ4 1352 aa13.53□□□□□ -0.24
PDGFRA-210ENST00000512522 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
PDGFRA-210ENST00000512522 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
PDGFRA-210ENST00000512522 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
PDGFRA-210ENST00000512522 FOXO3O43524 673 aa13.51□□□□□ -0.25
PDGFRA-210ENST00000512522 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
PDGFRA-210ENST00000512522 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
PDGFRA-210ENST00000512522 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
PDGFRA-210ENST00000512522 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
PDGFRA-210ENST00000512522 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
PDGFRA-210ENST00000512522 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
PDGFRA-210ENST00000512522 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
PDGFRA-210ENST00000512522 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
PDGFRA-210ENST00000512522 PSME1Q06323 249 aa13.49□□□□□ -0.25
PDGFRA-210ENST00000512522 AATKQ6ZMQ8 1374 aa13.48□□□□□ -0.25
PDGFRA-210ENST00000512522 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
PDGFRA-210ENST00000512522 COG3Q96JB2 828 aa13.48□□□□□ -0.25
PDGFRA-210ENST00000512522 PXDNQ92626 1479 aa13.48□□□□□ -0.25
PDGFRA-210ENST00000512522 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
PDGFRA-210ENST00000512522 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
PDGFRA-210ENST00000512522 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
PDGFRA-210ENST00000512522 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
PDGFRA-210ENST00000512522 MTHFSP49914 203 aa13.46□□□□□ -0.25
PDGFRA-210ENST00000512522 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.26
PDGFRA-210ENST00000512522 INSRP06213 1382 aa13.45□□□□□ -0.26
PDGFRA-210ENST00000512522 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
PDGFRA-210ENST00000512522 ALS2Q96Q42 1657 aa13.45□□□□□ -0.26
PDGFRA-210ENST00000512522 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
PDGFRA-210ENST00000512522 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
PDGFRA-210ENST00000512522 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
PDGFRA-210ENST00000512522 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
PDGFRA-210ENST00000512522 IQSEC2Q5JU85 1478 aa13.44□□□□□ -0.26
PDGFRA-210ENST00000512522 FBLN1P23142 703 aa13.44□□□□□ -0.26
PDGFRA-210ENST00000512522 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
PDGFRA-210ENST00000512522 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
PDGFRA-210ENST00000512522 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
PDGFRA-210ENST00000512522 NLRP6P59044 892 aa13.43□□□□□ -0.26
PDGFRA-210ENST00000512522 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
PDGFRA-210ENST00000512522 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
PDGFRA-210ENST00000512522 USP19O94966 1318 aa13.41□□□□□ -0.26
PDGFRA-210ENST00000512522 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
PDGFRA-210ENST00000512522 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 SLIT3O75094 1523 aa13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 FAM9BQ8IZU0 186 aa13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
PDGFRA-210ENST00000512522 NFAT5O94916 1531 aa13.39□□□□□ -0.27
PDGFRA-210ENST00000512522 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
PDGFRA-210ENST00000512522 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
PDGFRA-210ENST00000512522 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
PDGFRA-210ENST00000512522 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 TOM1O60784 492 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 CACNB1Q02641 598 aaPredicted RBP13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
PDGFRA-210ENST00000512522 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
PDGFRA-210ENST00000512522 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
PDGFRA-210ENST00000512522 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
PDGFRA-210ENST00000512522 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms