RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 FYB1O15117 783 aa16.15■□□□□ 0.18
PCDHA4-202ENST00000512229 TATP17735 454 aaPredicted RBP16.15■□□□□ 0.18
PCDHA4-202ENST00000512229 DUSP27Q5VZP5 1158 aa16.15■□□□□ 0.18
PCDHA4-202ENST00000512229 KCNH5Q8NCM2 988 aa16.15■□□□□ 0.18
PCDHA4-202ENST00000512229 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
PCDHA4-202ENST00000512229 PARD3Q8TEW0 1356 aa16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 HSP90AB4PQ58FF6 505 aa16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 USP35Q9P2H5 1018 aa16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 ATP7AQ04656 1500 aa16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 FOXO3O43524 673 aa16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 PLCB2Q00722 1185 aa16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 G3BP1Q13283 466 aaKnown RBP eCLIP16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 NOL8Q76FK4 1167 aaKnown RBP16.14■□□□□ 0.17
PCDHA4-202ENST00000512229 IFIT2P09913 472 aaKnown RBP16.13■□□□□ 0.17
PCDHA4-202ENST00000512229 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.13■□□□□ 0.17
PCDHA4-202ENST00000512229 RARSP54136 660 aaKnown RBP16.13■□□□□ 0.17
PCDHA4-202ENST00000512229 ANKRD36BQ8N2N9 1353 aa16.13■□□□□ 0.17
PCDHA4-202ENST00000512229 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
PCDHA4-202ENST00000512229 ZC3H6P61129 1189 aaKnown RBP16.12■□□□□ 0.17
PCDHA4-202ENST00000512229 GZF1Q9H116 711 aaPredicted RBP16.12■□□□□ 0.17
PCDHA4-202ENST00000512229 PTMSP20962 102 aa16.12■□□□□ 0.17
PCDHA4-202ENST00000512229 DIAPH3Q9NSV4 1193 aa16.12■□□□□ 0.17
PCDHA4-202ENST00000512229 RIMS2Q9UQ26 1411 aa16.12■□□□□ 0.17
PCDHA4-202ENST00000512229 C1orf115Q9H7X2 142 aa16.12■□□□□ 0.17
PCDHA4-202ENST00000512229 ACEP12821 1306 aa16.11■□□□□ 0.17
PCDHA4-202ENST00000512229 DCTN1Q14203 1278 aa16.11■□□□□ 0.17
PCDHA4-202ENST00000512229 L1TD1Q5T7N2 865 aaKnown RBP16.11■□□□□ 0.17
PCDHA4-202ENST00000512229 PRDM11Q9NQV5 511 aa16.11■□□□□ 0.17
PCDHA4-202ENST00000512229 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 SSH1Q8WYL5 1049 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 CARD14Q9BXL6 1004 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 STRN4Q9NRL3 753 aa16.1■□□□□ 0.17
PCDHA4-202ENST00000512229 EIF2AK4Q9P2K8 1649 aaKnown RBP16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 FBLN1P23142 703 aa16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 C22orf23Q9BZE7 217 aa16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 ZMYM3Q14202 1370 aa16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 ARHGEF5Q12774 1597 aa16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 MCM10Q7L590 875 aa16.09■□□□□ 0.17
PCDHA4-202ENST00000512229 SURF6O75683 361 aaKnown RBP16.08■□□□□ 0.17
PCDHA4-202ENST00000512229 NKTRP30414 1462 aaKnown RBP16.08■□□□□ 0.17
PCDHA4-202ENST00000512229 GNAT3A8MTJ3 354 aa16.08■□□□□ 0.16
PCDHA4-202ENST00000512229 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
PCDHA4-202ENST00000512229 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
PCDHA4-202ENST00000512229 GNAI2P04899 355 aa16.08■□□□□ 0.16
PCDHA4-202ENST00000512229 IFT57Q9NWB7 429 aa16.08■□□□□ 0.16
PCDHA4-202ENST00000512229 ANO2Q9NQ90 1003 aa16.08■□□□□ 0.16
PCDHA4-202ENST00000512229 BACH2Q9BYV9 841 aa16.07■□□□□ 0.16
PCDHA4-202ENST00000512229 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
PCDHA4-202ENST00000512229 TMEM57Q8N5G2 664 aa16.07■□□□□ 0.16
PCDHA4-202ENST00000512229 MAST1Q9Y2H9 1570 aa16.06■□□□□ 0.16
PCDHA4-202ENST00000512229 GCC2Q8IWJ2 1684 aa16.06■□□□□ 0.16
PCDHA4-202ENST00000512229 FRAT2O75474 233 aaPredicted RBP16.06■□□□□ 0.16
PCDHA4-202ENST00000512229 MIS18AQ9NYP9 233 aa16.06■□□□□ 0.16
PCDHA4-202ENST00000512229 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
PCDHA4-202ENST00000512229 ERC2O15083 957 aa16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 CDC45O75419 566 aa16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 HSP90B1P14625 803 aaKnown RBP16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 ALDH1L2Q3SY69 923 aa16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 NEO1Q92859 1461 aa16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 GNL2Q13823 731 aaKnown RBP16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 SRCIN1Q9C0H9 1055 aa16.05■□□□□ 0.16
PCDHA4-202ENST00000512229 ATP10AO60312 1499 aa16.04■□□□□ 0.16
PCDHA4-202ENST00000512229 ZKSCAN1P17029 563 aaPredicted RBP16.04■□□□□ 0.16
PCDHA4-202ENST00000512229 LRRFIP1Q32MZ4 808 aaKnown RBP16.04■□□□□ 0.16
PCDHA4-202ENST00000512229 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
PCDHA4-202ENST00000512229 COL17A1Q9UMD9 1497 aaPredicted RBP16.03■□□□□ 0.16
PCDHA4-202ENST00000512229 BTBD11A6QL63 1104 aa16.03■□□□□ 0.16
PCDHA4-202ENST00000512229 CABP4P57796 275 aa16.03■□□□□ 0.16
PCDHA4-202ENST00000512229 DDX54Q8TDD1 881 aaKnown RBP16.03■□□□□ 0.16
PCDHA4-202ENST00000512229 POLR3AO14802 1390 aaPredicted RBP16.03■□□□□ 0.16
PCDHA4-202ENST00000512229 TMX4Q9H1E5 349 aaPredicted RBP16.02■□□□□ 0.16
PCDHA4-202ENST00000512229 HTATSF1O43719 755 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 HSP90AB2PQ58FF8 381 aa16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 TAF7Q15545 349 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 USHBP1Q8N6Y0 703 aa16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 POLKQ9UBT6 870 aa16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 YTHDC2Q9H6S0 1430 aaKnown RBP16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 RPAP2Q8IXW5 612 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
PCDHA4-202ENST00000512229 KDM6BO15054 1643 aa16■□□□□ 0.15
PCDHA4-202ENST00000512229 PPIP5K1Q6PFW1 1433 aa16■□□□□ 0.15
PCDHA4-202ENST00000512229 DNTTIP2Q5QJE6 756 aaKnown RBP16■□□□□ 0.15
PCDHA4-202ENST00000512229 TOMM22Q9NS69 142 aa16■□□□□ 0.15
PCDHA4-202ENST00000512229 MYO5CQ9NQX4 1742 aa16■□□□□ 0.15
PCDHA4-202ENST00000512229 SPATA31E1Q6ZUB1 1445 aa16■□□□□ 0.15
PCDHA4-202ENST00000512229 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
PCDHA4-202ENST00000512229 FOXD4L5Q5VV16 416 aaPredicted RBP16■□□□□ 0.15
PCDHA4-202ENST00000512229 FOXD4L4Q8WXT5 416 aaPredicted RBP16■□□□□ 0.15
PCDHA4-202ENST00000512229 ADGBQ8N7X0 1667 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 CHD1LQ86WJ1 897 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 CHMP5Q9NZZ3 219 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 TBX22Q9Y458 520 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 KIF3AQ9Y496 699 aa15.99■□□□□ 0.15
PCDHA4-202ENST00000512229 NPATQ14207 1427 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms