RNA–Protein interactions for RNA: ENST00000512146.6

SNCAIP-216, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 1,849 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-216ENST00000512146 C3P01024 1663 aa19.34■□□□□ 0.69
SNCAIP-216ENST00000512146 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
SNCAIP-216ENST00000512146 NEUROD2Q15784 382 aa19.32■□□□□ 0.68
SNCAIP-216ENST00000512146 POLKQ9UBT6 870 aa19.32■□□□□ 0.68
SNCAIP-216ENST00000512146 AATKQ6ZMQ8 1374 aa19.31■□□□□ 0.68
SNCAIP-216ENST00000512146 BCAR3O75815 825 aa19.31■□□□□ 0.68
SNCAIP-216ENST00000512146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.31■□□□□ 0.68
SNCAIP-216ENST00000512146 EID1Q9Y6B2 187 aa19.31■□□□□ 0.68
SNCAIP-216ENST00000512146 PRR36Q9H6K5 1346 aa19.31■□□□□ 0.68
SNCAIP-216ENST00000512146 TCERG1O14776 1098 aaKnown RBP19.3■□□□□ 0.68
SNCAIP-216ENST00000512146 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
SNCAIP-216ENST00000512146 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
SNCAIP-216ENST00000512146 KDM2BQ8NHM5 1336 aa19.3■□□□□ 0.68
SNCAIP-216ENST00000512146 PDE3AQ14432 1141 aa19.3■□□□□ 0.68
SNCAIP-216ENST00000512146 MON2Q7Z3U7 1717 aa19.29■□□□□ 0.68
SNCAIP-216ENST00000512146 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
SNCAIP-216ENST00000512146 U2SURPO15042 1029 aaKnown RBP19.29■□□□□ 0.68
SNCAIP-216ENST00000512146 TMPOP42166 694 aaKnown RBP19.29■□□□□ 0.68
SNCAIP-216ENST00000512146 PNNQ9H307 717 aaKnown RBP19.29■□□□□ 0.68
SNCAIP-216ENST00000512146 MYH16Q9H6N6 1097 aa19.29■□□□□ 0.68
SNCAIP-216ENST00000512146 FER1L4A9Z1Z3 1794 aa19.28■□□□□ 0.68
SNCAIP-216ENST00000512146 FCHSD2O94868 740 aa19.28■□□□□ 0.68
SNCAIP-216ENST00000512146 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.27■□□□□ 0.68
SNCAIP-216ENST00000512146 MS4A1P11836 297 aa19.27■□□□□ 0.68
SNCAIP-216ENST00000512146 RARSP54136 660 aaKnown RBP19.27■□□□□ 0.68
SNCAIP-216ENST00000512146 THEMISQ8N1K5 641 aaPredicted RBP19.27■□□□□ 0.68
SNCAIP-216ENST00000512146 IL16Q14005 1332 aa19.27■□□□□ 0.67
SNCAIP-216ENST00000512146 PLEKHG3A1L390 1219 aa19.26■□□□□ 0.67
SNCAIP-216ENST00000512146 NME9Q86XW9 330 aa19.26■□□□□ 0.67
SNCAIP-216ENST00000512146 TRIM35Q9UPQ4 493 aa19.26■□□□□ 0.67
SNCAIP-216ENST00000512146 NCKAP5LQ9HCH0 1330 aa19.26■□□□□ 0.67
SNCAIP-216ENST00000512146 PTCH1Q13635 1447 aa19.26■□□□□ 0.67
SNCAIP-216ENST00000512146 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
SNCAIP-216ENST00000512146 CT47B1P0C2W7 299 aaPredicted RBP19.25■□□□□ 0.67
SNCAIP-216ENST00000512146 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
SNCAIP-216ENST00000512146 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
SNCAIP-216ENST00000512146 CENPQQ7L2Z9 268 aaPredicted RBP19.25■□□□□ 0.67
SNCAIP-216ENST00000512146 DIP2AQ14689 1571 aa19.25■□□□□ 0.67
SNCAIP-216ENST00000512146 TOPAZ1Q8N9V7 1692 aa19.24■□□□□ 0.67
SNCAIP-216ENST00000512146 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
SNCAIP-216ENST00000512146 RSPH6AQ9H0K4 717 aa19.23■□□□□ 0.67
SNCAIP-216ENST00000512146 COG3Q96JB2 828 aa19.22■□□□□ 0.67
SNCAIP-216ENST00000512146 FBLN1P23142 703 aa19.21■□□□□ 0.67
SNCAIP-216ENST00000512146 IL13P35225 146 aa19.21■□□□□ 0.67
SNCAIP-216ENST00000512146 AMOTL2Q9Y2J4 779 aa19.21■□□□□ 0.67
SNCAIP-216ENST00000512146 MSH5O43196 834 aa19.21■□□□□ 0.67
SNCAIP-216ENST00000512146 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
SNCAIP-216ENST00000512146 LRRC7Q96NW7 1537 aa19.21■□□□□ 0.66
SNCAIP-216ENST00000512146 ITSN1Q15811 1721 aa19.2■□□□□ 0.66
SNCAIP-216ENST00000512146 NRKQ7Z2Y5 1582 aa19.2■□□□□ 0.66
SNCAIP-216ENST00000512146 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
SNCAIP-216ENST00000512146 EMILIN1Q9Y6C2 1016 aa19.2■□□□□ 0.66
SNCAIP-216ENST00000512146 AAMPQ13685 434 aa19.19■□□□□ 0.66
SNCAIP-216ENST00000512146 SSH2Q76I76 1423 aa19.19■□□□□ 0.66
SNCAIP-216ENST00000512146 TTC21BQ7Z4L5 1316 aa19.19■□□□□ 0.66
SNCAIP-216ENST00000512146 RIPK4P57078 832 aa19.18■□□□□ 0.66
SNCAIP-216ENST00000512146 ACEP12821 1306 aa19.18■□□□□ 0.66
SNCAIP-216ENST00000512146 USP6P35125 1406 aa19.18■□□□□ 0.66
SNCAIP-216ENST00000512146 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
SNCAIP-216ENST00000512146 PIK3R4Q99570 1358 aa19.18■□□□□ 0.66
SNCAIP-216ENST00000512146 OVOS2A0A0J9YW53 1432 aa19.17■□□□□ 0.66
SNCAIP-216ENST00000512146 OVOS2Q6IE36 1432 aa19.17■□□□□ 0.66
SNCAIP-216ENST00000512146 PPM1GO15355 546 aaPredicted RBP19.17■□□□□ 0.66
SNCAIP-216ENST00000512146 PRKAR2BP31323 418 aa19.17■□□□□ 0.66
SNCAIP-216ENST00000512146 XRN1Q8IZH2 1706 aaKnown RBP19.16■□□□□ 0.66
SNCAIP-216ENST00000512146 CEP170BQ9Y4F5 1589 aaPredicted RBP19.15■□□□□ 0.66
SNCAIP-216ENST00000512146 USP31Q70CQ4 1352 aa19.14■□□□□ 0.66
SNCAIP-216ENST00000512146 PDE4AP27815 886 aa19.14■□□□□ 0.65
SNCAIP-216ENST00000512146 PANK1Q8TE04 598 aa19.14■□□□□ 0.65
SNCAIP-216ENST00000512146 TSR2Q969E8 191 aaKnown RBP19.14■□□□□ 0.65
SNCAIP-216ENST00000512146 BACH2Q9BYV9 841 aa19.14■□□□□ 0.65
SNCAIP-216ENST00000512146 CANXP27824 592 aaKnown RBP19.14■□□□□ 0.65
SNCAIP-216ENST00000512146 NFE2L2Q16236 605 aa19.14■□□□□ 0.65
SNCAIP-216ENST00000512146 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
SNCAIP-216ENST00000512146 CLUAP1Q96AJ1 413 aa19.13■□□□□ 0.65
SNCAIP-216ENST00000512146 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
SNCAIP-216ENST00000512146 NEFMP07197 916 aa19.12■□□□□ 0.65
SNCAIP-216ENST00000512146 FRAT1Q92837 279 aaPredicted RBP19.12■□□□□ 0.65
SNCAIP-216ENST00000512146 PHACTR3Q96KR7 559 aa19.12■□□□□ 0.65
SNCAIP-216ENST00000512146 COG6Q9Y2V7 657 aa19.12■□□□□ 0.65
SNCAIP-216ENST00000512146 RRS1Q15050 365 aaKnown RBP19.11■□□□□ 0.65
SNCAIP-216ENST00000512146 TTC21AQ8NDW8 1320 aa19.11■□□□□ 0.65
SNCAIP-216ENST00000512146 RLBP1P12271 317 aa19.11■□□□□ 0.65
SNCAIP-216ENST00000512146 ANKARQ7Z5J8 1434 aa19.1■□□□□ 0.65
SNCAIP-216ENST00000512146 NALCNQ8IZF0 1738 aa19.1■□□□□ 0.65
SNCAIP-216ENST00000512146 HMOX1P09601 288 aa19.09■□□□□ 0.65
SNCAIP-216ENST00000512146 PLPPR3Q6T4P5 718 aa19.09■□□□□ 0.65
SNCAIP-216ENST00000512146 CALD1Q05682 793 aaKnown RBP19.09■□□□□ 0.65
SNCAIP-216ENST00000512146 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
SNCAIP-216ENST00000512146 BCL2L13Q9BXK5 485 aa19.09■□□□□ 0.65
SNCAIP-216ENST00000512146 SKAP1Q86WV1 359 aa19.08■□□□□ 0.64
SNCAIP-216ENST00000512146 ZNF428Q96B54 188 aa19.08■□□□□ 0.64
SNCAIP-216ENST00000512146 IGHDP01880 384 aa19.07■□□□□ 0.64
SNCAIP-216ENST00000512146 NUTM2FA1L443 756 aa19.07■□□□□ 0.64
SNCAIP-216ENST00000512146 KCNA6P17658 529 aa19.07■□□□□ 0.64
SNCAIP-216ENST00000512146 SSH1Q8WYL5 1049 aa19.07■□□□□ 0.64
SNCAIP-216ENST00000512146 TNNQ9UQP3 1299 aa19.07■□□□□ 0.64
SNCAIP-216ENST00000512146 RIMS1Q86UR5 1692 aaKnown RBP19.06■□□□□ 0.64
SNCAIP-216ENST00000512146 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
SNCAIP-216ENST00000512146 BRPF1P55201 1214 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms