RNA–Protein interactions for RNA: ENST00000512143.1

PDGFRA-209, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-209ENST00000512143 NGDNQ8NEJ9 315 aaKnown RBP13.56□□□□□ -0.24
PDGFRA-209ENST00000512143 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
PDGFRA-209ENST00000512143 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
PDGFRA-209ENST00000512143 NLRP13Q86W25 1043 aa13.55□□□□□ -0.24
PDGFRA-209ENST00000512143 KIF1AQ12756 1690 aa13.54□□□□□ -0.24
PDGFRA-209ENST00000512143 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
PDGFRA-209ENST00000512143 NME9Q86XW9 330 aa13.54□□□□□ -0.24
PDGFRA-209ENST00000512143 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
PDGFRA-209ENST00000512143 GGNBP2Q9H3C7 697 aa13.54□□□□□ -0.24
PDGFRA-209ENST00000512143 TTC21AQ8NDW8 1320 aa13.54□□□□□ -0.24
PDGFRA-209ENST00000512143 USP31Q70CQ4 1352 aa13.53□□□□□ -0.24
PDGFRA-209ENST00000512143 SLAIN2Q9P270 581 aa13.52□□□□□ -0.25
PDGFRA-209ENST00000512143 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
PDGFRA-209ENST00000512143 OVOS2A0A0J9YW53 1432 aa13.51□□□□□ -0.25
PDGFRA-209ENST00000512143 OVOS2Q6IE36 1432 aa13.51□□□□□ -0.25
PDGFRA-209ENST00000512143 FOXO3O43524 673 aa13.51□□□□□ -0.25
PDGFRA-209ENST00000512143 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
PDGFRA-209ENST00000512143 ZRANB1Q9UGI0 708 aa13.51□□□□□ -0.25
PDGFRA-209ENST00000512143 USP54Q70EL1 1684 aa13.5□□□□□ -0.25
PDGFRA-209ENST00000512143 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
PDGFRA-209ENST00000512143 PNISRQ8TF01 805 aaKnown RBP13.5□□□□□ -0.25
PDGFRA-209ENST00000512143 TRPM3Q9HCF6 1732 aaPredicted RBP13.5□□□□□ -0.25
PDGFRA-209ENST00000512143 PIK3C2AO00443 1686 aa13.5□□□□□ -0.25
PDGFRA-209ENST00000512143 PSME1Q06323 249 aa13.49□□□□□ -0.25
PDGFRA-209ENST00000512143 AATKQ6ZMQ8 1374 aa13.48□□□□□ -0.25
PDGFRA-209ENST00000512143 KRT28Q7Z3Y7 464 aa13.48□□□□□ -0.25
PDGFRA-209ENST00000512143 COG3Q96JB2 828 aa13.48□□□□□ -0.25
PDGFRA-209ENST00000512143 PXDNQ92626 1479 aa13.48□□□□□ -0.25
PDGFRA-209ENST00000512143 MARF1Q9Y4F3 1742 aaKnown RBP13.47□□□□□ -0.25
PDGFRA-209ENST00000512143 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
PDGFRA-209ENST00000512143 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
PDGFRA-209ENST00000512143 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
PDGFRA-209ENST00000512143 MTHFSP49914 203 aa13.46□□□□□ -0.25
PDGFRA-209ENST00000512143 SMG6Q86US8 1419 aaKnown RBP13.46□□□□□ -0.26
PDGFRA-209ENST00000512143 INSRP06213 1382 aa13.45□□□□□ -0.26
PDGFRA-209ENST00000512143 PNPLA6Q8IY17 1366 aa13.45□□□□□ -0.26
PDGFRA-209ENST00000512143 ALS2Q96Q42 1657 aa13.45□□□□□ -0.26
PDGFRA-209ENST00000512143 ADRA2BP18089 450 aa13.45□□□□□ -0.26
PDGFRA-209ENST00000512143 ABTB2Q8N961 1025 aa13.45□□□□□ -0.26
PDGFRA-209ENST00000512143 POLKQ9UBT6 870 aa13.45□□□□□ -0.26
PDGFRA-209ENST00000512143 SOS2Q07890 1332 aaPredicted RBP13.44□□□□□ -0.26
PDGFRA-209ENST00000512143 MAP2P11137 1827 aaKnown RBP13.44□□□□□ -0.26
PDGFRA-209ENST00000512143 IQSEC2Q5JU85 1478 aa13.44□□□□□ -0.26
PDGFRA-209ENST00000512143 FBLN1P23142 703 aa13.44□□□□□ -0.26
PDGFRA-209ENST00000512143 XPCQ01831 940 aaPredicted RBP13.44□□□□□ -0.26
PDGFRA-209ENST00000512143 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
PDGFRA-209ENST00000512143 PAK3O75914 559 aaPredicted RBP13.43□□□□□ -0.26
PDGFRA-209ENST00000512143 NLRP6P59044 892 aa13.43□□□□□ -0.26
PDGFRA-209ENST00000512143 NHSL1Q5SYE7 1610 aa13.42□□□□□ -0.26
PDGFRA-209ENST00000512143 COL3A1P02461 1466 aaPredicted RBP13.42□□□□□ -0.26
PDGFRA-209ENST00000512143 PIAS4Q8N2W9 510 aaPredicted RBP13.42□□□□□ -0.26
PDGFRA-209ENST00000512143 USP19O94966 1318 aa13.41□□□□□ -0.26
PDGFRA-209ENST00000512143 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
PDGFRA-209ENST00000512143 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 SLIT3O75094 1523 aa13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 NUTM2GQ5VZR2 741 aa13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 FAM9BQ8IZU0 186 aa13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 EMILIN1Q9Y6C2 1016 aa13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 SHPRHQ149N8 1683 aa13.4□□□□□ -0.26
PDGFRA-209ENST00000512143 NFAT5O94916 1531 aa13.39□□□□□ -0.27
PDGFRA-209ENST00000512143 RRS1Q15050 365 aaKnown RBP13.39□□□□□ -0.27
PDGFRA-209ENST00000512143 ROBO1Q9Y6N7 1651 aa13.39□□□□□ -0.27
PDGFRA-209ENST00000512143 AHDC1Q5TGY3 1603 aaPredicted RBP13.39□□□□□ -0.27
PDGFRA-209ENST00000512143 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 TOM1O60784 492 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 CERKQ8TCT0 537 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 PEAK1Q9H792 1746 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
PDGFRA-209ENST00000512143 MED1Q15648 1581 aaPredicted RBP13.37□□□□□ -0.27
PDGFRA-209ENST00000512143 ARHGEF10O15013 1369 aa13.37□□□□□ -0.27
PDGFRA-209ENST00000512143 KCNH5Q8NCM2 988 aa13.37□□□□□ -0.27
PDGFRA-209ENST00000512143 CRYBG1Q9Y4K1 1723 aa13.36□□□□□ -0.27
PDGFRA-209ENST00000512143 GCP02774 474 aa13.36□□□□□ -0.27
PDGFRA-209ENST00000512143 BLMP54132 1417 aaPredicted RBP13.36□□□□□ -0.27
PDGFRA-209ENST00000512143 PHRF1Q9P1Y6 1649 aaKnown RBP13.35□□□□□ -0.27
PDGFRA-209ENST00000512143 DIAPH1O60610 1272 aaKnown RBP13.35□□□□□ -0.27
PDGFRA-209ENST00000512143 IL13P35225 146 aa13.35□□□□□ -0.27
PDGFRA-209ENST00000512143 YTHDC1Q96MU7 727 aaKnown RBP13.35□□□□□ -0.27
PDGFRA-209ENST00000512143 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDGFRA-209ENST00000512143 ARHGEF25Q86VW2 580 aa13.34□□□□□ -0.27
PDGFRA-209ENST00000512143 RTL1A6NKG5 1358 aa13.33□□□□□ -0.27
PDGFRA-209ENST00000512143 FLT4P35916 1363 aa13.33□□□□□ -0.27
PDGFRA-209ENST00000512143 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
PDGFRA-209ENST00000512143 SOX12O15370 315 aa13.33□□□□□ -0.28
PDGFRA-209ENST00000512143 MSH5O43196 834 aa13.33□□□□□ -0.28
PDGFRA-209ENST00000512143 HSP90AB2PQ58FF8 381 aa13.33□□□□□ -0.28
PDGFRA-209ENST00000512143 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
PDGFRA-209ENST00000512143 UBAP1LF5GYI3 381 aa13.32□□□□□ -0.28
PDGFRA-209ENST00000512143 HOXC9P31274 260 aa13.32□□□□□ -0.28
PDGFRA-209ENST00000512143 IP6K1Q92551 441 aa13.32□□□□□ -0.28
PDGFRA-209ENST00000512143 LRRC59Q96AG4 307 aaKnown RBP13.32□□□□□ -0.28
PDGFRA-209ENST00000512143 NUDCQ9Y266 331 aa13.32□□□□□ -0.28
PDGFRA-209ENST00000512143 LTN1O94822 1766 aa13.32□□□□□ -0.28
PDGFRA-209ENST00000512143 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
PDGFRA-209ENST00000512143 COL16A1Q07092 1604 aaPredicted RBP13.31□□□□□ -0.28
PDGFRA-209ENST00000512143 CPDO75976 1380 aa13.31□□□□□ -0.28
PDGFRA-209ENST00000512143 AMPHP49418 695 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms