RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
HTT-209ENST00000512068 DISP3Q9P2K9 1392 aa11.06□□□□□ -0.64
HTT-209ENST00000512068 IRX5P78411 483 aaPredicted RBP11.06□□□□□ -0.64
HTT-209ENST00000512068 TMEM132EQ6IEE7 984 aa11.06□□□□□ -0.64
HTT-209ENST00000512068 THEMISQ8N1K5 641 aaPredicted RBP11.06□□□□□ -0.64
HTT-209ENST00000512068 TESK2Q96S53 571 aa11.06□□□□□ -0.64
HTT-209ENST00000512068 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
HTT-209ENST00000512068 CCER2I3L3R5 266 aa11.05□□□□□ -0.64
HTT-209ENST00000512068 CENPBP07199 599 aaPredicted RBP11.05□□□□□ -0.64
HTT-209ENST00000512068 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
HTT-209ENST00000512068 SBNO2Q9Y2G9 1366 aa11.04□□□□□ -0.64
HTT-209ENST00000512068 CEP170BQ9Y4F5 1589 aaPredicted RBP11.04□□□□□ -0.64
HTT-209ENST00000512068 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
HTT-209ENST00000512068 PDCD7Q8N8D1 485 aaKnown RBP11.04□□□□□ -0.64
HTT-209ENST00000512068 YTHDC1Q96MU7 727 aaKnown RBP11.04□□□□□ -0.64
HTT-209ENST00000512068 OCEL1Q9H607 264 aa11.04□□□□□ -0.64
HTT-209ENST00000512068 POGKQ9P215 609 aa11.04□□□□□ -0.64
HTT-209ENST00000512068 STK26Q9P289 416 aa11.04□□□□□ -0.64
HTT-209ENST00000512068 YTHDC2Q9H6S0 1430 aaKnown RBP11.03□□□□□ -0.64
HTT-209ENST00000512068 TXNDC2Q86VQ3 553 aa11.03□□□□□ -0.64
HTT-209ENST00000512068 ZNF142P52746 1687 aaPredicted RBP11.02□□□□□ -0.64
HTT-209ENST00000512068 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
HTT-209ENST00000512068 SLIT1O75093 1534 aa11.02□□□□□ -0.65
HTT-209ENST00000512068 ASXL1Q8IXJ9 1541 aa11.02□□□□□ -0.65
HTT-209ENST00000512068 EVC2Q86UK5 1308 aa11.02□□□□□ -0.65
HTT-209ENST00000512068 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.65
HTT-209ENST00000512068 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
HTT-209ENST00000512068 KNDC1Q76NI1 1749 aa11.01□□□□□ -0.65
HTT-209ENST00000512068 DLC1Q96QB1 1528 aa11□□□□□ -0.65
HTT-209ENST00000512068 NRXN3Q9Y4C0 1643 aa11□□□□□ -0.65
HTT-209ENST00000512068 CNGB1Q14028 1251 aaPredicted RBP11□□□□□ -0.65
HTT-209ENST00000512068 DPY19L2Q6NUT2 758 aa11□□□□□ -0.65
HTT-209ENST00000512068 LRPPRCP42704 1394 aaKnown RBP11□□□□□ -0.65
HTT-209ENST00000512068 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
HTT-209ENST00000512068 ARHGAP23Q9P227 1491 aa11□□□□□ -0.65
HTT-209ENST00000512068 DIP2AQ14689 1571 aa10.99□□□□□ -0.65
HTT-209ENST00000512068 SAFB2Q14151 953 aaKnown RBP eCLIP10.99□□□□□ -0.65
HTT-209ENST00000512068 SLC39A7Q92504 469 aa10.99□□□□□ -0.65
HTT-209ENST00000512068 PRAM1Q96QH2 718 aa10.99□□□□□ -0.65
HTT-209ENST00000512068 PRKRIP1Q9H875 184 aaPredicted RBP10.99□□□□□ -0.65
HTT-209ENST00000512068 KNSTRNQ9Y448 316 aa10.99□□□□□ -0.65
HTT-209ENST00000512068 C7P10643 843 aa10.98□□□□□ -0.65
HTT-209ENST00000512068 PANK3Q9H999 370 aa10.98□□□□□ -0.65
HTT-209ENST00000512068 PTPRMP28827 1452 aa10.98□□□□□ -0.65
HTT-209ENST00000512068 MYOM1P52179 1685 aa10.98□□□□□ -0.65
HTT-209ENST00000512068 PLCG2P16885 1265 aa10.97□□□□□ -0.65
HTT-209ENST00000512068 SRPK2P78362 688 aaKnown RBP10.97□□□□□ -0.65
HTT-209ENST00000512068 RALBP1Q15311 655 aa10.97□□□□□ -0.65
HTT-209ENST00000512068 ANKLE2Q86XL3 938 aa10.97□□□□□ -0.65
HTT-209ENST00000512068 TMC1Q8TDI8 760 aa10.97□□□□□ -0.65
HTT-209ENST00000512068 PUS7Q96PZ0 661 aaKnown RBP10.97□□□□□ -0.65
HTT-209ENST00000512068 ABCC11Q96J66 1382 aa10.96□□□□□ -0.65
HTT-209ENST00000512068 MINK1Q8N4C8 1332 aaPredicted RBP10.96□□□□□ -0.65
HTT-209ENST00000512068 LTKP29376 864 aa10.96□□□□□ -0.65
HTT-209ENST00000512068 ATAD2Q6PL18 1390 aa10.95□□□□□ -0.66
HTT-209ENST00000512068 NINLQ9Y2I6 1382 aa10.95□□□□□ -0.66
HTT-209ENST00000512068 SEC24BO95487 1268 aa10.95□□□□□ -0.66
HTT-209ENST00000512068 MRS2Q9HD23 443 aa10.95□□□□□ -0.66
HTT-209ENST00000512068 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
HTT-209ENST00000512068 CPS1P31327 1500 aa10.94□□□□□ -0.66
HTT-209ENST00000512068 TULP4Q9NRJ4 1543 aa10.94□□□□□ -0.66
HTT-209ENST00000512068 ADAMTS13Q76LX8 1427 aa10.94□□□□□ -0.66
HTT-209ENST00000512068 METP08581 1390 aa10.94□□□□□ -0.66
HTT-209ENST00000512068 TECPR2O15040 1411 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 FAM135BQ49AJ0 1406 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 MYBBP1AQ9BQG0 1328 aaKnown RBP10.93□□□□□ -0.66
HTT-209ENST00000512068 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 SIRT1Q96EB6 747 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 TMEM121BQ9BXQ6 578 aaPredicted RBP10.93□□□□□ -0.66
HTT-209ENST00000512068 METRNQ9UJH8 293 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 TBX22Q9Y458 520 aa10.93□□□□□ -0.66
HTT-209ENST00000512068 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
HTT-209ENST00000512068 POTEFA5A3E0 1075 aa10.92□□□□□ -0.66
HTT-209ENST00000512068 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
HTT-209ENST00000512068 PDE4AP27815 886 aa10.91□□□□□ -0.66
HTT-209ENST00000512068 WAPLQ7Z5K2 1190 aa10.91□□□□□ -0.66
HTT-209ENST00000512068 L3MBTL3Q96JM7 780 aaPredicted RBP10.91□□□□□ -0.66
HTT-209ENST00000512068 CRISPLD2Q9H0B8 497 aa10.91□□□□□ -0.66
HTT-209ENST00000512068 WDR70Q9NW82 654 aa10.91□□□□□ -0.66
HTT-209ENST00000512068 BOLA1Q9Y3E2 137 aa10.91□□□□□ -0.66
HTT-209ENST00000512068 PIK3R4Q99570 1358 aa10.9□□□□□ -0.66
HTT-209ENST00000512068 MED14O60244 1454 aa10.9□□□□□ -0.66
HTT-209ENST00000512068 HDGFL2Q7Z4V5 671 aaPredicted RBP10.9□□□□□ -0.66
HTT-209ENST00000512068 CDK19Q9BWU1 502 aa10.9□□□□□ -0.66
HTT-209ENST00000512068 TERF2IPQ9NYB0 399 aa10.9□□□□□ -0.66
HTT-209ENST00000512068 ANKRD36BQ8N2N9 1353 aa10.9□□□□□ -0.67
HTT-209ENST00000512068 PARD3Q8TEW0 1356 aa10.9□□□□□ -0.67
HTT-209ENST00000512068 PER1O15534 1290 aaPredicted RBP10.89□□□□□ -0.67
HTT-209ENST00000512068 NLRP13Q86W25 1043 aa10.89□□□□□ -0.67
HTT-209ENST00000512068 AMOTL2Q9Y2J4 779 aa10.89□□□□□ -0.67
HTT-209ENST00000512068 PTCH1Q13635 1447 aa10.89□□□□□ -0.67
HTT-209ENST00000512068 NSD3Q9BZ95 1437 aa10.89□□□□□ -0.67
HTT-209ENST00000512068 BRD4O60885 1362 aaPredicted RBP10.89□□□□□ -0.67
HTT-209ENST00000512068 PLEKHH1Q9ULM0 1364 aa10.89□□□□□ -0.67
HTT-209ENST00000512068 WASLO00401 505 aaPredicted RBP10.88□□□□□ -0.67
HTT-209ENST00000512068 NPHP4O75161 1426 aaPredicted RBP10.88□□□□□ -0.67
HTT-209ENST00000512068 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
HTT-209ENST00000512068 NPC1L1Q9UHC9 1359 aa10.88□□□□□ -0.67
HTT-209ENST00000512068 USP32Q8NFA0 1604 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms