RNA–Protein interactions for RNA: ENST00000511898.1

BRD8-223, Transcript of bromodomain containing 8, human

TSL 5

Gene BRD8, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD8-223	ENST00000511898	RBM6	P78332	1123 aa	Known RBP	10.91	□□□□□ -0.66
BRD8-223	ENST00000511898	LMOD2	Q6P5Q4	547 aa		10.91	□□□□□ -0.66
BRD8-223	ENST00000511898	SBNO2	Q9Y2G9	1366 aa		10.9	□□□□□ -0.66
BRD8-223	ENST00000511898	PAK3	O75914	559 aa	Predicted RBP	10.9	□□□□□ -0.66
BRD8-223	ENST00000511898	TESK2	Q96S53	571 aa		10.9	□□□□□ -0.66
BRD8-223	ENST00000511898	PPIP5K1	Q6PFW1	1433 aa		10.9	□□□□□ -0.66
BRD8-223	ENST00000511898	TRPM3	Q9HCF6	1732 aa	Predicted RBP	10.89	□□□□□ -0.67
BRD8-223	ENST00000511898	SLIT2	O94813	1529 aa		10.89	□□□□□ -0.67
BRD8-223	ENST00000511898	PLEKHG5	O94827	1062 aa		10.89	□□□□□ -0.67
BRD8-223	ENST00000511898	UNC5CL	Q8IV45	518 aa		10.89	□□□□□ -0.67
BRD8-223	ENST00000511898	TRPC5	Q9UL62	973 aa	Predicted RBP	10.89	□□□□□ -0.67
BRD8-223	ENST00000511898	ST20-MTHFS	A0A0A6YYL1	179 aa		10.88	□□□□□ -0.67
BRD8-223	ENST00000511898	ATRN	O75882	1429 aa		10.88	□□□□□ -0.67
BRD8-223	ENST00000511898	SSH2	Q76I76	1423 aa		10.88	□□□□□ -0.67
BRD8-223	ENST00000511898	TOPAZ1	Q8N9V7	1692 aa		10.88	□□□□□ -0.67
BRD8-223	ENST00000511898	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.87	□□□□□ -0.67
BRD8-223	ENST00000511898	GJD4	Q96KN9	370 aa	Predicted RBP	10.87	□□□□□ -0.67
BRD8-223	ENST00000511898	PUS7	Q96PZ0	661 aa	Known RBP	10.87	□□□□□ -0.67
BRD8-223	ENST00000511898	ALS2	Q96Q42	1657 aa		10.87	□□□□□ -0.67
BRD8-223	ENST00000511898	QRICH2	Q9H0J4	1663 aa		10.87	□□□□□ -0.67
BRD8-223	ENST00000511898	HAP1	P54257	671 aa	Predicted RBP	10.86	□□□□□ -0.67
BRD8-223	ENST00000511898	NUTM2G	Q5VZR2	741 aa		10.86	□□□□□ -0.67
BRD8-223	ENST00000511898	ABTB2	Q8N961	1025 aa		10.86	□□□□□ -0.67
BRD8-223	ENST00000511898	ZNF692	Q9BU19	519 aa	Predicted RBP	10.86	□□□□□ -0.67
BRD8-223	ENST00000511898	BRD4	O60885	1362 aa	Predicted RBP	10.86	□□□□□ -0.67
BRD8-223	ENST00000511898	CPSF1	Q10570	1443 aa	Known RBP	10.85	□□□□□ -0.67
BRD8-223	ENST00000511898	ONECUT3	O60422	494 aa	Predicted RBP	10.85	□□□□□ -0.67
BRD8-223	ENST00000511898	VPS72	Q15906	364 aa		10.85	□□□□□ -0.67
BRD8-223	ENST00000511898	USP19	O94966	1318 aa		10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	USP6	P35125	1406 aa		10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	CCER1	Q8TC90	406 aa	Predicted RBP	10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	SLC12A5	Q9H2X9	1139 aa		10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	ATAD2	Q6PL18	1390 aa		10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	ITSN1	Q15811	1721 aa		10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	RGS12	O14924	1447 aa		10.84	□□□□□ -0.67
BRD8-223	ENST00000511898	GC	P02774	474 aa		10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	ZC3H6	P61129	1189 aa	Known RBP	10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	NLRP13	Q86W25	1043 aa		10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	UPF1	Q92900	1129 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	BTG4	Q9NY30	223 aa		10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	MARF1	Q9Y4F3	1742 aa	Known RBP	10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	TTC21B	Q7Z4L5	1316 aa		10.83	□□□□□ -0.68
BRD8-223	ENST00000511898	KIAA0232	Q92628	1395 aa		10.82	□□□□□ -0.68
BRD8-223	ENST00000511898	NLRP6	P59044	892 aa		10.82	□□□□□ -0.68
BRD8-223	ENST00000511898	CD163L1	Q9NR16	1453 aa		10.81	□□□□□ -0.68
BRD8-223	ENST00000511898	SLC24A1	O60721	1099 aa		10.81	□□□□□ -0.68
BRD8-223	ENST00000511898	CHRNA2	Q15822	529 aa		10.81	□□□□□ -0.68
BRD8-223	ENST00000511898	PRDM11	Q9NQV5	511 aa		10.81	□□□□□ -0.68
BRD8-223	ENST00000511898	ABCA3	Q99758	1704 aa		10.81	□□□□□ -0.68
BRD8-223	ENST00000511898	CRYBG1	Q9Y4K1	1723 aa		10.81	□□□□□ -0.68
BRD8-223	ENST00000511898	CPD	O75976	1380 aa		10.8	□□□□□ -0.68
BRD8-223	ENST00000511898	USP47	Q96K76	1375 aa		10.8	□□□□□ -0.68
BRD8-223	ENST00000511898	KTN1	Q86UP2	1357 aa	Known RBP	10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	GLI3	P10071	1580 aa		10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	TMC1	Q8TDI8	760 aa		10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	ZRANB1	Q9UGI0	708 aa		10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	SPATA31A5	Q5VU36	1347 aa		10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	SPATA31A7	Q8IWB4	1347 aa		10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	TTC21A	Q8NDW8	1320 aa		10.79	□□□□□ -0.68
BRD8-223	ENST00000511898	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.78	□□□□□ -0.68
BRD8-223	ENST00000511898	SEPT12	Q8IYM1	358 aa		10.78	□□□□□ -0.68
BRD8-223	ENST00000511898	USP31	Q70CQ4	1352 aa		10.77	□□□□□ -0.68
BRD8-223	ENST00000511898	TMF1	P82094	1093 aa		10.77	□□□□□ -0.69
BRD8-223	ENST00000511898	ARHGEF25	Q86VW2	580 aa		10.77	□□□□□ -0.69
BRD8-223	ENST00000511898	TERF2IP	Q9NYB0	399 aa		10.77	□□□□□ -0.69
BRD8-223	ENST00000511898	AXIN2	Q9Y2T1	843 aa		10.77	□□□□□ -0.69
BRD8-223	ENST00000511898	NWD2	Q9ULI1	1742 aa		10.77	□□□□□ -0.69
BRD8-223	ENST00000511898	COL14A1	Q05707	1796 aa	Known RBP	10.77	□□□□□ -0.69
BRD8-223	ENST00000511898	CAMTA1	Q9Y6Y1	1673 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	SLIT3	O75094	1523 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	NME9	Q86XW9	330 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	CCDC9	Q9Y3X0	531 aa	Known RBP	10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	SPATA31A1	Q5TZJ5	1347 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898		A0A1W2PP64	1363 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	AATK	Q6ZMQ8	1374 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	PLCH1	Q4KWH8	1693 aa		10.76	□□□□□ -0.69
BRD8-223	ENST00000511898	NRK	Q7Z2Y5	1582 aa		10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	FAM98C	Q17RN3	349 aa	Known RBP	10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	LARP1	Q6PKG0	1096 aa	Known RBP	10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	KCNH5	Q8NCM2	988 aa		10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	STRN4	Q9NRL3	753 aa		10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	NINL	Q9Y2I6	1382 aa		10.75	□□□□□ -0.69
BRD8-223	ENST00000511898	PIK3C2A	O00443	1686 aa		10.74	□□□□□ -0.69
BRD8-223	ENST00000511898	EVA1C	P58658	441 aa		10.74	□□□□□ -0.69
BRD8-223	ENST00000511898	NRAP	Q86VF7	1730 aa		10.74	□□□□□ -0.69
BRD8-223	ENST00000511898	AKAP12	Q02952	1782 aa		10.74	□□□□□ -0.69
BRD8-223	ENST00000511898	EP400	Q96L91	3159 aa		10.74	□□□□□ -0.69
BRD8-223	ENST00000511898	EDC4	Q6P2E9	1401 aa	Known RBP	10.74	□□□□□ -0.69
BRD8-223	ENST00000511898	HSPA5	P11021	654 aa	Known RBP	10.73	□□□□□ -0.69
BRD8-223	ENST00000511898	BARGIN	Q6ZT62	677 aa		10.73	□□□□□ -0.69
BRD8-223	ENST00000511898	CARD14	Q9BXL6	1004 aa		10.73	□□□□□ -0.69
BRD8-223	ENST00000511898	LMO7	Q8WWI1	1683 aa		10.73	□□□□□ -0.69
BRD8-223	ENST00000511898	FYB1	O15117	783 aa		10.72	□□□□□ -0.69
BRD8-223	ENST00000511898	CDCA8	Q53HL2	280 aa		10.72	□□□□□ -0.69
BRD8-223	ENST00000511898	KRT27	Q7Z3Y8	459 aa		10.72	□□□□□ -0.69
BRD8-223	ENST00000511898	ANKRD36B	Q8N2N9	1353 aa		10.72	□□□□□ -0.69
BRD8-223	ENST00000511898	SOX12	O15370	315 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms