RNA–Protein interactions for RNA: ENST00000511642.5

CCND3-215, Transcript of cyclin D3, humanhuman

TSL 2 BASIC

Gene CCND3, Length 2,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-215ENST00000511642 YTHDC2Q9H6S0 1430 aaKnown RBP17.63■□□□□ 0.41
CCND3-215ENST00000511642 FYB1O15117 783 aa17.62■□□□□ 0.41
CCND3-215ENST00000511642 TMPOP42166 694 aaKnown RBP17.62■□□□□ 0.41
CCND3-215ENST00000511642 GSE1Q14687 1217 aa17.62■□□□□ 0.41
CCND3-215ENST00000511642 ZKSCAN2Q63HK3 967 aa17.62■□□□□ 0.41
CCND3-215ENST00000511642 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
CCND3-215ENST00000511642 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
CCND3-215ENST00000511642 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
CCND3-215ENST00000511642 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
CCND3-215ENST00000511642 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
CCND3-215ENST00000511642 RWDD1Q9H446 243 aaPredicted RBP17.61■□□□□ 0.41
CCND3-215ENST00000511642 U2SURPO15042 1029 aaKnown RBP17.6■□□□□ 0.41
CCND3-215ENST00000511642 EXOSC9Q06265 439 aaKnown RBP17.6■□□□□ 0.41
CCND3-215ENST00000511642 DZIP1LQ8IYY4 767 aaKnown RBP17.6■□□□□ 0.41
CCND3-215ENST00000511642 PNPLA6Q8IY17 1366 aa17.6■□□□□ 0.41
CCND3-215ENST00000511642 ARHGEF40Q8TER5 1519 aa17.59■□□□□ 0.41
CCND3-215ENST00000511642 IL16Q14005 1332 aa17.58■□□□□ 0.41
CCND3-215ENST00000511642 TRIM27P14373 513 aa17.58■□□□□ 0.41
CCND3-215ENST00000511642 SSH1Q8WYL5 1049 aa17.58■□□□□ 0.41
CCND3-215ENST00000511642 TERF2IPQ9NYB0 399 aa17.58■□□□□ 0.41
CCND3-215ENST00000511642 ALKQ9UM73 1620 aa17.58■□□□□ 0.41
CCND3-215ENST00000511642 FTSJ3Q8IY81 847 aaKnown RBP17.57■□□□□ 0.4
CCND3-215ENST00000511642 TBC1D32Q96NH3 1257 aa17.57■□□□□ 0.4
CCND3-215ENST00000511642 SMC4Q9NTJ3 1288 aa17.57■□□□□ 0.4
CCND3-215ENST00000511642 CDC42BPGQ6DT37 1551 aa17.56■□□□□ 0.4
CCND3-215ENST00000511642 TULP1O00294 542 aaPredicted RBP17.55■□□□□ 0.4
CCND3-215ENST00000511642 FBXO31Q5XUX0 539 aaPredicted RBP17.55■□□□□ 0.4
CCND3-215ENST00000511642 POGKQ9P215 609 aa17.55■□□□□ 0.4
CCND3-215ENST00000511642 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
CCND3-215ENST00000511642 AEBP2Q6ZN18 517 aaPredicted RBP17.54■□□□□ 0.4
CCND3-215ENST00000511642 HDAC1Q13547 482 aaPredicted RBP17.54■□□□□ 0.4
CCND3-215ENST00000511642 ATF7IPQ6VMQ6 1270 aa17.54■□□□□ 0.4
CCND3-215ENST00000511642 LRRC7Q96NW7 1537 aa17.54■□□□□ 0.4
CCND3-215ENST00000511642 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
CCND3-215ENST00000511642 RIPK4P57078 832 aa17.53■□□□□ 0.4
CCND3-215ENST00000511642 CDK19Q9BWU1 502 aa17.53■□□□□ 0.4
CCND3-215ENST00000511642 BECN1Q14457 450 aa17.53■□□□□ 0.4
CCND3-215ENST00000511642 HDGFL2Q7Z4V5 671 aaPredicted RBP17.52■□□□□ 0.4
CCND3-215ENST00000511642 ANTXR1Q9H6X2 564 aa17.52■□□□□ 0.4
CCND3-215ENST00000511642 CABP1Q9NZU7 370 aa17.52■□□□□ 0.39
CCND3-215ENST00000511642 NOB1Q9ULX3 412 aaKnown RBP17.52■□□□□ 0.39
CCND3-215ENST00000511642 DDX19BQ9UMR2 479 aa17.52■□□□□ 0.39
CCND3-215ENST00000511642 ITPRIPQ8IWB1 547 aa17.51■□□□□ 0.39
CCND3-215ENST00000511642 FAM135BQ49AJ0 1406 aa17.5■□□□□ 0.39
CCND3-215ENST00000511642 TMEM57Q8N5G2 664 aa17.5■□□□□ 0.39
CCND3-215ENST00000511642 UPF2Q9HAU5 1272 aaKnown RBP17.5■□□□□ 0.39
CCND3-215ENST00000511642 DLC1Q96QB1 1528 aa17.5■□□□□ 0.39
CCND3-215ENST00000511642 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
CCND3-215ENST00000511642 TBC1D2Q9BYX2 928 aa17.49■□□□□ 0.39
CCND3-215ENST00000511642 BRPF3Q9ULD4 1205 aa17.49■□□□□ 0.39
CCND3-215ENST00000511642 SETD1AO15047 1707 aaKnown RBP17.49■□□□□ 0.39
CCND3-215ENST00000511642 ATP7BP35670 1465 aa17.49■□□□□ 0.39
CCND3-215ENST00000511642 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
CCND3-215ENST00000511642 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
CCND3-215ENST00000511642 ZBTB40Q9NUA8 1239 aa17.48■□□□□ 0.39
CCND3-215ENST00000511642 FCHSD2O94868 740 aa17.48■□□□□ 0.39
CCND3-215ENST00000511642 KIF16BQ96L93 1317 aa17.48■□□□□ 0.39
CCND3-215ENST00000511642 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
CCND3-215ENST00000511642 PPIP5K1Q6PFW1 1433 aa17.47■□□□□ 0.39
CCND3-215ENST00000511642 FBLN1P23142 703 aa17.47■□□□□ 0.39
CCND3-215ENST00000511642 PNNQ9H307 717 aaKnown RBP17.47■□□□□ 0.39
CCND3-215ENST00000511642 RIMBP3CA6NJZ7 1639 aa17.47■□□□□ 0.39
CCND3-215ENST00000511642 RIMBP3BA6NNM3 1639 aa17.47■□□□□ 0.39
CCND3-215ENST00000511642 RIMBP3Q9UFD9 1639 aa17.47■□□□□ 0.39
CCND3-215ENST00000511642 A2ML1A8K2U0 1454 aa17.46■□□□□ 0.39
CCND3-215ENST00000511642 ALDH1L2Q3SY69 923 aa17.46■□□□□ 0.39
CCND3-215ENST00000511642 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
CCND3-215ENST00000511642 CYB5RLQ6IPT4 315 aa17.45■□□□□ 0.38
CCND3-215ENST00000511642 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
CCND3-215ENST00000511642 WAPLQ7Z5K2 1190 aa17.45■□□□□ 0.38
CCND3-215ENST00000511642 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.44■□□□□ 0.38
CCND3-215ENST00000511642 REREQ9P2R6 1566 aa17.44■□□□□ 0.38
CCND3-215ENST00000511642 BRPF1P55201 1214 aaPredicted RBP17.44■□□□□ 0.38
CCND3-215ENST00000511642 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
CCND3-215ENST00000511642 CPSF1Q10570 1443 aaKnown RBP17.43■□□□□ 0.38
CCND3-215ENST00000511642 IPO8O15397 1037 aaKnown RBP17.43■□□□□ 0.38
CCND3-215ENST00000511642 PHACTR3Q96KR7 559 aa17.43■□□□□ 0.38
CCND3-215ENST00000511642 AGLP35573 1532 aa17.42■□□□□ 0.38
CCND3-215ENST00000511642 RIMS2Q9UQ26 1411 aa17.42■□□□□ 0.38
CCND3-215ENST00000511642 C22orf23Q9BZE7 217 aa17.42■□□□□ 0.38
CCND3-215ENST00000511642 STAG3Q9UJ98 1225 aa17.42■□□□□ 0.38
CCND3-215ENST00000511642 NUCB1Q02818 461 aa17.41■□□□□ 0.38
CCND3-215ENST00000511642 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
CCND3-215ENST00000511642 NRXN3Q9Y4C0 1643 aa17.4■□□□□ 0.38
CCND3-215ENST00000511642 MFAP1P55081 439 aaKnown RBP17.4■□□□□ 0.38
CCND3-215ENST00000511642 ZNF428Q96B54 188 aa17.4■□□□□ 0.38
CCND3-215ENST00000511642 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
CCND3-215ENST00000511642 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
CCND3-215ENST00000511642 PTCH1Q13635 1447 aa17.4■□□□□ 0.38
CCND3-215ENST00000511642 THUMPD2Q9BTF0 503 aaKnown RBP17.39■□□□□ 0.38
CCND3-215ENST00000511642 EDC4Q6P2E9 1401 aaKnown RBP17.39■□□□□ 0.37
CCND3-215ENST00000511642 CDK12Q9NYV4 1490 aaPredicted RBP17.39■□□□□ 0.37
CCND3-215ENST00000511642 MAP2P11137 1827 aaKnown RBP17.39■□□□□ 0.37
CCND3-215ENST00000511642 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.37
CCND3-215ENST00000511642 VAMP4O75379 141 aa17.39■□□□□ 0.37
CCND3-215ENST00000511642 HMOX1P09601 288 aa17.39■□□□□ 0.37
CCND3-215ENST00000511642 IL13P35225 146 aa17.39■□□□□ 0.37
CCND3-215ENST00000511642 KLHL34Q8N239 644 aa17.39■□□□□ 0.37
CCND3-215ENST00000511642 MRPL50Q8N5N7 158 aaKnown RBP17.38■□□□□ 0.37
CCND3-215ENST00000511642 DIP2BQ9P265 1576 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms