RNA–Protein interactions for RNA: ENST00000511303.5

SGCA-207, Transcript of sarcoglycan alpha, humanhuman

TSL 3

Gene SGCA, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-207ENST00000511303 COG3Q96JB2 828 aa16.02■□□□□ 0.16
SGCA-207ENST00000511303 C1orf167Q5SNV9 1468 aa16.01■□□□□ 0.15
SGCA-207ENST00000511303 CFAP53Q96M91 514 aa16■□□□□ 0.15
SGCA-207ENST00000511303 AATKQ6ZMQ8 1374 aa16■□□□□ 0.15
SGCA-207ENST00000511303 USP31Q70CQ4 1352 aa16■□□□□ 0.15
SGCA-207ENST00000511303 PSME1Q06323 249 aa15.99■□□□□ 0.15
SGCA-207ENST00000511303 STRCP1A6NGW2 1772 aa15.99■□□□□ 0.15
SGCA-207ENST00000511303 AKAP12Q02952 1782 aa15.98■□□□□ 0.15
SGCA-207ENST00000511303 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
SGCA-207ENST00000511303 MST1RQ04912 1400 aa15.98■□□□□ 0.15
SGCA-207ENST00000511303 MON2Q7Z3U7 1717 aa15.98■□□□□ 0.15
SGCA-207ENST00000511303 NME9Q86XW9 330 aa15.98■□□□□ 0.15
SGCA-207ENST00000511303 FAM9BQ8IZU0 186 aa15.98■□□□□ 0.15
SGCA-207ENST00000511303 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
SGCA-207ENST00000511303 MTHFSP49914 203 aa15.97■□□□□ 0.15
SGCA-207ENST00000511303 SLAIN2Q9P270 581 aa15.96■□□□□ 0.15
SGCA-207ENST00000511303 TNNT2P45379 298 aaPredicted RBP15.95■□□□□ 0.14
SGCA-207ENST00000511303 YTHDC1Q96MU7 727 aaKnown RBP15.95■□□□□ 0.14
SGCA-207ENST00000511303 FOXO3O43524 673 aa15.94■□□□□ 0.14
SGCA-207ENST00000511303 WDR43Q15061 677 aaKnown RBP eCLIP15.94■□□□□ 0.14
SGCA-207ENST00000511303 KRT28Q7Z3Y7 464 aa15.94■□□□□ 0.14
SGCA-207ENST00000511303 PNPLA6Q8IY17 1366 aa15.94■□□□□ 0.14
SGCA-207ENST00000511303 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
SGCA-207ENST00000511303 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
SGCA-207ENST00000511303 NPHP3Q7Z494 1330 aa15.94■□□□□ 0.14
SGCA-207ENST00000511303 ABTB2Q8N961 1025 aa15.93■□□□□ 0.14
SGCA-207ENST00000511303 POLKQ9UBT6 870 aa15.93■□□□□ 0.14
SGCA-207ENST00000511303 NLRP6P59044 892 aa15.92■□□□□ 0.14
SGCA-207ENST00000511303 NUDCQ9Y266 331 aa15.92■□□□□ 0.14
SGCA-207ENST00000511303 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
SGCA-207ENST00000511303 NRKQ7Z2Y5 1582 aa15.92■□□□□ 0.14
SGCA-207ENST00000511303 ANKRD26Q9UPS8 1709 aa15.91■□□□□ 0.14
SGCA-207ENST00000511303 PAK3O75914 559 aaPredicted RBP15.91■□□□□ 0.14
SGCA-207ENST00000511303 ZRANB1Q9UGI0 708 aa15.91■□□□□ 0.14
SGCA-207ENST00000511303 RGPD8O14715 1765 aaPredicted RBP15.9■□□□□ 0.14
SGCA-207ENST00000511303 SBNO1A3KN83 1393 aa15.9■□□□□ 0.14
SGCA-207ENST00000511303 KIF20BQ96Q89 1820 aa15.9■□□□□ 0.14
SGCA-207ENST00000511303 NGEFQ8N5V2 710 aa15.9■□□□□ 0.14
SGCA-207ENST00000511303 ADAMTS8Q9UP79 889 aa15.9■□□□□ 0.14
SGCA-207ENST00000511303 KIF24Q5T7B8 1368 aa15.89■□□□□ 0.13
SGCA-207ENST00000511303 SMG6Q86US8 1419 aaKnown RBP15.89■□□□□ 0.13
SGCA-207ENST00000511303 HNRNPUQ00839 825 aaKnown RBP eCLIP15.89■□□□□ 0.13
SGCA-207ENST00000511303 BRINP3Q76B58 766 aa15.89■□□□□ 0.13
SGCA-207ENST00000511303 KCNH5Q8NCM2 988 aa15.89■□□□□ 0.13
SGCA-207ENST00000511303 LTBP4Q8N2S1 1624 aa15.88■□□□□ 0.13
SGCA-207ENST00000511303 PNNQ9H307 717 aaKnown RBP15.88■□□□□ 0.13
SGCA-207ENST00000511303 DIAPH1O60610 1272 aaKnown RBP15.87■□□□□ 0.13
SGCA-207ENST00000511303 XIRP1Q702N8 1843 aaKnown RBP15.87■□□□□ 0.13
SGCA-207ENST00000511303 NCBP3Q53F19 620 aaKnown RBP15.86■□□□□ 0.13
SGCA-207ENST00000511303 ZBED9Q6R2W3 1325 aa15.86■□□□□ 0.13
SGCA-207ENST00000511303 FBXO41Q8TF61 875 aa15.85■□□□□ 0.13
SGCA-207ENST00000511303 CDK12Q9NYV4 1490 aaPredicted RBP15.84■□□□□ 0.13
SGCA-207ENST00000511303 USP54Q70EL1 1684 aa15.84■□□□□ 0.13
SGCA-207ENST00000511303 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
SGCA-207ENST00000511303 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
SGCA-207ENST00000511303 BLMP54132 1417 aaPredicted RBP15.84■□□□□ 0.13
SGCA-207ENST00000511303 USP19O94966 1318 aa15.83■□□□□ 0.12
SGCA-207ENST00000511303 SPATA31A3Q5VYP0 1347 aa15.83■□□□□ 0.12
SGCA-207ENST00000511303 ARHGEF10O15013 1369 aa15.83■□□□□ 0.12
SGCA-207ENST00000511303 PPM1GO15355 546 aaPredicted RBP15.82■□□□□ 0.12
SGCA-207ENST00000511303 FCHSD2O94868 740 aa15.82■□□□□ 0.12
SGCA-207ENST00000511303 RRS1Q15050 365 aaKnown RBP15.82■□□□□ 0.12
SGCA-207ENST00000511303 COL3A1P02461 1466 aaPredicted RBP15.82■□□□□ 0.12
SGCA-207ENST00000511303 PIK3C2AO00443 1686 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 TOM1O60784 492 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 GCP02774 474 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 U2AF1L5P0DN76 240 aaPredicted RBP15.81■□□□□ 0.12
SGCA-207ENST00000511303 FBLN1P23142 703 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 IL13P35225 146 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 U2AF1Q01081 240 aaKnown RBP eCLIP15.81■□□□□ 0.12
SGCA-207ENST00000511303 MAP3K19Q56UN5 1328 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 RUNDC1Q96C34 613 aa15.81■□□□□ 0.12
SGCA-207ENST00000511303 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
SGCA-207ENST00000511303 FLT4P35916 1363 aa15.8■□□□□ 0.12
SGCA-207ENST00000511303 AMPHP49418 695 aa15.8■□□□□ 0.12
SGCA-207ENST00000511303 XPCQ01831 940 aaPredicted RBP15.8■□□□□ 0.12
SGCA-207ENST00000511303 PDE3BQ13370 1112 aa15.8■□□□□ 0.12
SGCA-207ENST00000511303 NUTM2GQ5VZR2 741 aa15.8■□□□□ 0.12
SGCA-207ENST00000511303 IQSEC2Q5JU85 1478 aa15.79■□□□□ 0.12
SGCA-207ENST00000511303 PXDNQ92626 1479 aa15.79■□□□□ 0.12
SGCA-207ENST00000511303 TNS3Q68CZ2 1445 aa15.79■□□□□ 0.12
SGCA-207ENST00000511303 U2SURPO15042 1029 aaKnown RBP15.78■□□□□ 0.12
SGCA-207ENST00000511303 LMOD2Q6P5Q4 547 aa15.78■□□□□ 0.12
SGCA-207ENST00000511303 ARHGEF25Q86VW2 580 aa15.78■□□□□ 0.12
SGCA-207ENST00000511303 IP6K1Q92551 441 aa15.78■□□□□ 0.12
SGCA-207ENST00000511303 TRPM3Q9HCF6 1732 aaPredicted RBP15.77■□□□□ 0.12
SGCA-207ENST00000511303 SLIT3O75094 1523 aa15.77■□□□□ 0.11
SGCA-207ENST00000511303 HOXC9P31274 260 aa15.76■□□□□ 0.11
SGCA-207ENST00000511303 HSP90AB2PQ58FF8 381 aa15.76■□□□□ 0.11
SGCA-207ENST00000511303 DDX17Q92841 729 aaKnown RBP15.76■□□□□ 0.11
SGCA-207ENST00000511303 LRRC59Q96AG4 307 aaKnown RBP15.76■□□□□ 0.11
SGCA-207ENST00000511303 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
SGCA-207ENST00000511303 NEFMP07197 916 aa15.75■□□□□ 0.11
SGCA-207ENST00000511303 EIF4A2Q14240 407 aaKnown RBP15.75■□□□□ 0.11
SGCA-207ENST00000511303 APAF1O14727 1248 aa15.74■□□□□ 0.11
SGCA-207ENST00000511303 SOX12O15370 315 aa15.74■□□□□ 0.11
SGCA-207ENST00000511303 CCDC27Q2M243 656 aa15.74■□□□□ 0.11
SGCA-207ENST00000511303 PLEKHF1Q96S99 279 aa15.74■□□□□ 0.11
SGCA-207ENST00000511303 NFAT5O94916 1531 aa15.73■□□□□ 0.11
SGCA-207ENST00000511303 ALS2Q96Q42 1657 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms