RNA–Protein interactions for RNA: ENST00000511298.1

CDS1-202, Transcript of CDP-diacylglycerol synthase 1, humanhuman

TSL 5

Gene CDS1, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-202ENST00000511298 QTRT2Q9H974 415 aaKnown RBP30.83■■■□□ 2.53
CDS1-202ENST00000511298 USP21Q9UK80 565 aa30.82■■■□□ 2.52
CDS1-202ENST00000511298 BRD4O60885 1362 aaPredicted RBP30.81■■■□□ 2.52
CDS1-202ENST00000511298 SLC24A1O60721 1099 aa30.81■■■□□ 2.52
CDS1-202ENST00000511298 PLEKHG5O94827 1062 aa30.81■■■□□ 2.52
CDS1-202ENST00000511298 HAP1P54257 671 aaPredicted RBP30.81■■■□□ 2.52
CDS1-202ENST00000511298 RXRBP28702 533 aa30.8■■■□□ 2.52
CDS1-202ENST00000511298 ALS2Q96Q42 1657 aa30.8■■■□□ 2.52
CDS1-202ENST00000511298 ZNF692Q9BU19 519 aaPredicted RBP30.79■■■□□ 2.52
CDS1-202ENST00000511298 USP47Q96K76 1375 aa30.79■■■□□ 2.52
CDS1-202ENST00000511298 BCL9LQ86UU0 1499 aa30.76■■■□□ 2.52
CDS1-202ENST00000511298 USP6P35125 1406 aa30.76■■■□□ 2.51
CDS1-202ENST00000511298 ABTB2Q8N961 1025 aa30.76■■■□□ 2.51
CDS1-202ENST00000511298 SSH2Q76I76 1423 aa30.75■■■□□ 2.51
CDS1-202ENST00000511298 FAM83GA6ND36 823 aa30.75■■■□□ 2.51
CDS1-202ENST00000511298 TRPC5Q9UL62 973 aaPredicted RBP30.75■■■□□ 2.51
CDS1-202ENST00000511298 CPSF1Q10570 1443 aaKnown RBP30.74■■■□□ 2.51
CDS1-202ENST00000511298 RBM6P78332 1123 aaKnown RBP30.74■■■□□ 2.51
CDS1-202ENST00000511298 NUTM2GQ5VZR2 741 aa30.74■■■□□ 2.51
CDS1-202ENST00000511298 SLIT2O94813 1529 aa30.73■■■□□ 2.51
CDS1-202ENST00000511298 UNC5CLQ8IV45 518 aa30.72■■■□□ 2.51
CDS1-202ENST00000511298 ATRNO75882 1429 aa30.71■■■□□ 2.51
CDS1-202ENST00000511298 NLRP13Q86W25 1043 aa30.7■■■□□ 2.51
CDS1-202ENST00000511298 SLC12A5Q9H2X9 1139 aa30.7■■■□□ 2.51
CDS1-202ENST00000511298 USP19O94966 1318 aa30.68■■■□□ 2.5
CDS1-202ENST00000511298 TTC21BQ7Z4L5 1316 aa30.68■■■□□ 2.5
CDS1-202ENST00000511298 TMC1Q8TDI8 760 aa30.67■■■□□ 2.5
CDS1-202ENST00000511298 CDK12Q9NYV4 1490 aaPredicted RBP30.66■■■□□ 2.5
CDS1-202ENST00000511298 TMF1P82094 1093 aa30.66■■■□□ 2.5
CDS1-202ENST00000511298 MARF1Q9Y4F3 1742 aaKnown RBP30.66■■■□□ 2.5
CDS1-202ENST00000511298 KTN1Q86UP2 1357 aaKnown RBP30.65■■■□□ 2.5
CDS1-202ENST00000511298 ABCA3Q99758 1704 aa30.64■■■□□ 2.5
CDS1-202ENST00000511298 CD163L1Q9NR16 1453 aa30.64■■■□□ 2.5
CDS1-202ENST00000511298 NLRP6P59044 892 aa30.64■■■□□ 2.5
CDS1-202ENST00000511298 GJD4Q96KN9 370 aaPredicted RBP30.63■■■□□ 2.49
CDS1-202ENST00000511298 TTC21AQ8NDW8 1320 aa30.63■■■□□ 2.49
CDS1-202ENST00000511298 GCP02774 474 aa30.62■■■□□ 2.49
CDS1-202ENST00000511298 PRDM11Q9NQV5 511 aa30.62■■■□□ 2.49
CDS1-202ENST00000511298 ZC3H6P61129 1189 aaKnown RBP30.61■■■□□ 2.49
CDS1-202ENST00000511298 HDGFL2Q7Z4V5 671 aaPredicted RBP30.61■■■□□ 2.49
CDS1-202ENST00000511298 KIAA0232Q92628 1395 aa30.61■■■□□ 2.49
CDS1-202ENST00000511298 CRYBG1Q9Y4K1 1723 aa30.61■■■□□ 2.49
CDS1-202ENST00000511298 VPS72Q15906 364 aa30.6■■■□□ 2.49
CDS1-202ENST00000511298 BTG4Q9NY30 223 aa30.6■■■□□ 2.49
CDS1-202ENST00000511298 TERF2IPQ9NYB0 399 aa30.6■■■□□ 2.49
CDS1-202ENST00000511298 NINLQ9Y2I6 1382 aa30.6■■■□□ 2.49
CDS1-202ENST00000511298 CPDO75976 1380 aa30.57■■■□□ 2.48
CDS1-202ENST00000511298 CDCA8Q53HL2 280 aa30.57■■■□□ 2.48
CDS1-202ENST00000511298 EIF4G2P78344 907 aaKnown RBP eCLIP30.56■■■□□ 2.48
CDS1-202ENST00000511298 CHRNA2Q15822 529 aa30.56■■■□□ 2.48
CDS1-202ENST00000511298 RGS12O14924 1447 aa30.56■■■□□ 2.48
CDS1-202ENST00000511298 A0A1W2PP64 1363 aa30.55■■■□□ 2.48
CDS1-202ENST00000511298 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.53■■■□□ 2.48
CDS1-202ENST00000511298 AKAP12Q02952 1782 aa30.53■■■□□ 2.48
CDS1-202ENST00000511298 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.53■■■□□ 2.48
CDS1-202ENST00000511298 PHRF1Q9P1Y6 1649 aaKnown RBP30.52■■■□□ 2.48
CDS1-202ENST00000511298 HSPA5P11021 654 aaKnown RBP30.52■■■□□ 2.48
CDS1-202ENST00000511298 USP31Q70CQ4 1352 aa30.52■■■□□ 2.48
CDS1-202ENST00000511298 COL14A1Q05707 1796 aaKnown RBP30.51■■■□□ 2.48
CDS1-202ENST00000511298 EDC4Q6P2E9 1401 aaKnown RBP30.51■■■□□ 2.47
CDS1-202ENST00000511298 SLIT3O75094 1523 aa30.51■■■□□ 2.47
CDS1-202ENST00000511298 NRKQ7Z2Y5 1582 aa30.5■■■□□ 2.47
CDS1-202ENST00000511298 ZRANB1Q9UGI0 708 aa30.5■■■□□ 2.47
CDS1-202ENST00000511298 NWD2Q9ULI1 1742 aa30.5■■■□□ 2.47
CDS1-202ENST00000511298 ONECUT3O60422 494 aaPredicted RBP30.49■■■□□ 2.47
CDS1-202ENST00000511298 NME9Q86XW9 330 aa30.49■■■□□ 2.47
CDS1-202ENST00000511298 PIK3C2AO00443 1686 aa30.49■■■□□ 2.47
CDS1-202ENST00000511298 PLCH1Q4KWH8 1693 aa30.49■■■□□ 2.47
CDS1-202ENST00000511298 KCNH5Q8NCM2 988 aa30.48■■■□□ 2.47
CDS1-202ENST00000511298 ANKRD36BQ8N2N9 1353 aa30.47■■■□□ 2.47
CDS1-202ENST00000511298 CCDC9Q9Y3X0 531 aaKnown RBP30.47■■■□□ 2.47
CDS1-202ENST00000511298 GLI3P10071 1580 aa30.46■■■□□ 2.47
CDS1-202ENST00000511298 MON2Q7Z3U7 1717 aa30.46■■■□□ 2.47
CDS1-202ENST00000511298 SPATA31A5Q5VU36 1347 aa30.45■■■□□ 2.46
CDS1-202ENST00000511298 SPATA31A7Q8IWB4 1347 aa30.45■■■□□ 2.46
CDS1-202ENST00000511298 ARHGEF25Q86VW2 580 aa30.44■■■□□ 2.46
CDS1-202ENST00000511298 AATKQ6ZMQ8 1374 aa30.43■■■□□ 2.46
CDS1-202ENST00000511298 CAMTA1Q9Y6Y1 1673 aa30.42■■■□□ 2.46
CDS1-202ENST00000511298 STRN4Q9NRL3 753 aa30.41■■■□□ 2.46
CDS1-202ENST00000511298 NRAPQ86VF7 1730 aa30.41■■■□□ 2.46
CDS1-202ENST00000511298 EVA1CP58658 441 aa30.4■■■□□ 2.46
CDS1-202ENST00000511298 SEPT12Q8IYM1 358 aa30.4■■■□□ 2.46
CDS1-202ENST00000511298 UPF1Q92900 1129 aaKnown RBP eCLIP30.39■■■□□ 2.46
CDS1-202ENST00000511298 SOX12O15370 315 aa30.38■■■□□ 2.45
CDS1-202ENST00000511298 SPATA31A1Q5TZJ5 1347 aa30.38■■■□□ 2.45
CDS1-202ENST00000511298 ZBTB7CA1YPR0 619 aa30.37■■■□□ 2.45
CDS1-202ENST00000511298 AXIN2Q9Y2T1 843 aa30.37■■■□□ 2.45
CDS1-202ENST00000511298 LMO7Q8WWI1 1683 aa30.36■■■□□ 2.45
CDS1-202ENST00000511298 FAM98CQ17RN3 349 aaKnown RBP30.36■■■□□ 2.45
CDS1-202ENST00000511298 LARP1Q6PKG0 1096 aaKnown RBP30.36■■■□□ 2.45
CDS1-202ENST00000511298 CARD14Q9BXL6 1004 aa30.36■■■□□ 2.45
CDS1-202ENST00000511298 OVOS2A0A0J9YW53 1432 aa30.35■■■□□ 2.45
CDS1-202ENST00000511298 OVOS2Q6IE36 1432 aa30.35■■■□□ 2.45
CDS1-202ENST00000511298 NFAT5O94916 1531 aa30.35■■■□□ 2.45
CDS1-202ENST00000511298 FYB1O15117 783 aa30.34■■■□□ 2.45
CDS1-202ENST00000511298 C11orf95C9JLR9 678 aaPredicted RBP30.33■■■□□ 2.45
CDS1-202ENST00000511298 COL5A2P05997 1499 aaPredicted RBP30.32■■■□□ 2.44
CDS1-202ENST00000511298 COG3Q96JB2 828 aa30.31■■■□□ 2.44
CDS1-202ENST00000511298 USP54Q70EL1 1684 aa30.3■■■□□ 2.44
CDS1-202ENST00000511298 BARGINQ6ZT62 677 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms