RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 MINK1Q8N4C8 1332 aaPredicted RBP3.86□□□□□ -1.79
CLOCK-209ENST00000511124 CENPJQ9HC77 1338 aaPredicted RBP3.86□□□□□ -1.79
CLOCK-209ENST00000511124 MROH1Q8NDA8 1641 aa3.86□□□□□ -1.79
CLOCK-209ENST00000511124 BTG4Q9NY30 223 aa3.86□□□□□ -1.79
CLOCK-209ENST00000511124 SPG7Q9UQ90 795 aa3.86□□□□□ -1.79
CLOCK-209ENST00000511124 NINLQ9Y2I6 1382 aa3.86□□□□□ -1.79
CLOCK-209ENST00000511124 ZFYVE9O95405 1425 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 POLR1AO95602 1720 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-209ENST00000511124 GIGYF1O75420 1035 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-209ENST00000511124 TMF1P82094 1093 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 TRAK1Q9UPV9 953 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 AATKQ6ZMQ8 1374 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 SOS2Q07890 1332 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-209ENST00000511124 CGNL1Q0VF96 1302 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 SPATA31A3Q5VYP0 1347 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 PNPLA6Q8IY17 1366 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 WASLO00401 505 aaPredicted RBP3.85□□□□□ -1.79
CLOCK-209ENST00000511124 KCNQ2O43526 872 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 PRAM1Q96QH2 718 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 CDC42BPAQ5VT25 1732 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 PIK3C2GO75747 1445 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 AK7Q96M32 723 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 TAOK2Q9UL54 1235 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 NUDCQ9Y266 331 aa3.85□□□□□ -1.79
CLOCK-209ENST00000511124 VWDEQ8N2E2 1590 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 SENP3-EIF4A1A0A087X0R7 540 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 FAM98CQ17RN3 349 aaKnown RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 C1orf141Q5JVX7 400 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 KANK4Q5T7N3 995 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 NUDT16Q96DE0 195 aaKnown RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 HIRIP3Q9BW71 556 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 TIMELESSQ9UNS1 1208 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 CDC42BPBQ9Y5S2 1711 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 CROCC2H7BZ55 1655 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 MNX1P50219 401 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 SYTL4Q96C24 671 aaPredicted RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 ARXQ96QS3 562 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 C14orf93Q9H972 538 aaKnown RBP3.84□□□□□ -1.79
CLOCK-209ENST00000511124 CABP2Q9NPB3 220 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 USP35Q9P2H5 1018 aa3.84□□□□□ -1.79
CLOCK-209ENST00000511124 KDM5AP29375 1690 aaKnown RBP3.84□□□□□ -1.8
CLOCK-209ENST00000511124 ADGRB2O60241 1585 aa3.84□□□□□ -1.8
CLOCK-209ENST00000511124 NAIPQ13075 1403 aa3.84□□□□□ -1.8
CLOCK-209ENST00000511124 A0A087WZG4 1122 aa3.84□□□□□ -1.8
CLOCK-209ENST00000511124 SLC27A3Q5K4L6 730 aa3.84□□□□□ -1.8
CLOCK-209ENST00000511124 POLR3GLQ9BT43 218 aa3.84□□□□□ -1.8
CLOCK-209ENST00000511124 SOGA3Q5TF21 947 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 BARGINQ6ZT62 677 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 CCDC87Q9NVE4 849 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 TFCP2L1Q9NZI6 479 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 C1orf167Q5SNV9 1468 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 TNS3Q68CZ2 1445 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 TET3O43151 1660 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 RALGAPBQ86X10 1494 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 GTF2E1P29083 439 aaPredicted RBP3.83□□□□□ -1.8
CLOCK-209ENST00000511124 DPY19L2Q6NUT2 758 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 CDK19Q9BWU1 502 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 MTFR1LQ9H019 292 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 NWD1Q149M9 1564 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 KDM2BQ8NHM5 1336 aa3.83□□□□□ -1.8
CLOCK-209ENST00000511124 PHLPP1O60346 1717 aa3.82□□□□□ -1.8
CLOCK-209ENST00000511124 ZC3H6P61129 1189 aaKnown RBP3.82□□□□□ -1.8
CLOCK-209ENST00000511124 PUS7Q96PZ0 661 aaKnown RBP3.82□□□□□ -1.8
CLOCK-209ENST00000511124 CARD11Q9BXL7 1154 aa3.82□□□□□ -1.8
CLOCK-209ENST00000511124 GPBP1L1Q9HC44 474 aaPredicted RBP3.82□□□□□ -1.8
CLOCK-209ENST00000511124 IL2RBP14784 551 aa3.82□□□□□ -1.8
CLOCK-209ENST00000511124 G3V3G9 751 aa3.82□□□□□ -1.8
CLOCK-209ENST00000511124 R3HDM1Q15032 1099 aaKnown RBP3.82□□□□□ -1.8
CLOCK-209ENST00000511124 ARHGEF6Q15052 776 aa3.82□□□□□ -1.8
CLOCK-209ENST00000511124 PLEKHO1Q53GL0 409 aaPredicted RBP3.82□□□□□ -1.8
CLOCK-209ENST00000511124 DCAF8Q5TAQ9 597 aa3.82□□□□□ -1.8
CLOCK-209ENST00000511124 XPCQ01831 940 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-209ENST00000511124 ORAI2Q96SN7 254 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 TEX13AQ9BXU3 409 aaPredicted RBP3.81□□□□□ -1.8
CLOCK-209ENST00000511124 PARP3Q9Y6F1 533 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 ATP7BP35670 1465 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 OVOS2A0A0G2JMS6 1433 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 OVOS2A0A0J9YW53 1432 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 OVOS2Q6IE36 1432 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 USP47Q96K76 1375 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 MAP3K5Q99683 1374 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 TRIM37O94972 964 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 PLCB2Q00722 1185 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 KAT6BQ8WYB5 2073 aa3.81□□□□□ -1.8
CLOCK-209ENST00000511124 YTHDC2Q9H6S0 1430 aaKnown RBP3.8□□□□□ -1.8
CLOCK-209ENST00000511124 POLR3AO14802 1390 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-209ENST00000511124 PLSCR1O15162 318 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 TTC5Q8N0Z6 440 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 ZNF652Q9Y2D9 606 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 AHDC1Q5TGY3 1603 aaPredicted RBP3.8□□□□□ -1.8
CLOCK-209ENST00000511124 RAB3GAP2Q9H2M9 1393 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 NEUROD1Q13562 356 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 NLGN1Q8N2Q7 840 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 CARD10Q9BWT7 1032 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 SETD1AO15047 1707 aaKnown RBP3.8□□□□□ -1.8
CLOCK-209ENST00000511124 ROCK2O75116 1388 aaKnown RBP3.8□□□□□ -1.8
CLOCK-209ENST00000511124 NHSL1Q5SYE7 1610 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 SOX12O15370 315 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 ZPR1O75312 459 aa3.8□□□□□ -1.8
CLOCK-209ENST00000511124 EN1Q05925 392 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms