RNA–Protein interactions for RNA: ENST00000511072.5

PRDM16-206, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-206ENST00000511072 FAM177BA6PVY3 158 aa17.27■□□□□ 0.35
PRDM16-206ENST00000511072 SUPT6HQ7KZ85 1726 aaKnown RBP17.27■□□□□ 0.35
PRDM16-206ENST00000511072 MVPQ14764 893 aaKnown RBP17.26■□□□□ 0.35
PRDM16-206ENST00000511072 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
PRDM16-206ENST00000511072 WDR63Q8IWG1 891 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 IDI1Q13907 227 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 CCDC30Q5VVM6 783 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 RNF214Q8ND24 703 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 G3V3G9 751 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 GNAI3P08754 354 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 DCAF8Q5TAQ9 597 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 SMC3Q9UQE7 1217 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 CCDC61Q9Y6R9 512 aa17.26■□□□□ 0.35
PRDM16-206ENST00000511072 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
PRDM16-206ENST00000511072 BECN2A8MW95 431 aa17.25■□□□□ 0.35
PRDM16-206ENST00000511072 CPLX1O14810 134 aa17.25■□□□□ 0.35
PRDM16-206ENST00000511072 FBLN1P23142 703 aa17.25■□□□□ 0.35
PRDM16-206ENST00000511072 PTPRKQ15262 1439 aa17.25■□□□□ 0.35
PRDM16-206ENST00000511072 MCM4P33991 863 aa17.25■□□□□ 0.35
PRDM16-206ENST00000511072 FBXW7Q969H0 707 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 IQGAP2Q13576 1575 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.24■□□□□ 0.35
PRDM16-206ENST00000511072 TMEM57Q8N5G2 664 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 BICD2Q8TD16 824 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 RTEL1-TNFRSF6BF6WH68 1400 aa17.24■□□□□ 0.35
PRDM16-206ENST00000511072 TMX4Q9H1E5 349 aaPredicted RBP17.23■□□□□ 0.35
PRDM16-206ENST00000511072 HSP90AB4PQ58FF6 505 aa17.23■□□□□ 0.35
PRDM16-206ENST00000511072 NUDT16Q96DE0 195 aaKnown RBP17.23■□□□□ 0.35
PRDM16-206ENST00000511072 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
PRDM16-206ENST00000511072 PES1O00541 588 aaKnown RBP17.23■□□□□ 0.35
PRDM16-206ENST00000511072 ERC2O15083 957 aa17.23■□□□□ 0.35
PRDM16-206ENST00000511072 NUCB2P80303 420 aa17.23■□□□□ 0.35
PRDM16-206ENST00000511072 RNF20Q5VTR2 975 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 C8orf34Q49A92 452 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 MCM10Q7L590 875 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 CCDC34Q96HJ3 373 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 ZNF692Q9BU19 519 aaPredicted RBP17.22■□□□□ 0.35
PRDM16-206ENST00000511072 GOLGA6L19H0YKK7 550 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 TPM4P67936 248 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 WASHC4Q2M389 1173 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
PRDM16-206ENST00000511072 STRN4Q9NRL3 753 aa17.22■□□□□ 0.35
PRDM16-206ENST00000511072 CCDC141Q6ZP82 1450 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 NME9Q86XW9 330 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 THEMISQ8N1K5 641 aaPredicted RBP17.21■□□□□ 0.35
PRDM16-206ENST00000511072 SIL1Q9H173 461 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 GNAI2P04899 355 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 CPLX2Q6PUV4 134 aaKnown RBP17.21■□□□□ 0.35
PRDM16-206ENST00000511072 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 FSD1Q9BTV5 496 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 GPRASP1Q5JY77 1395 aa17.21■□□□□ 0.35
PRDM16-206ENST00000511072 KDM4AO75164 1064 aa17.21■□□□□ 0.34
PRDM16-206ENST00000511072 CCDC27Q2M243 656 aa17.21■□□□□ 0.34
PRDM16-206ENST00000511072 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
PRDM16-206ENST00000511072 FCHSD2O94868 740 aa17.2■□□□□ 0.34
PRDM16-206ENST00000511072 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
PRDM16-206ENST00000511072 PDIA4P13667 645 aaKnown RBP17.19■□□□□ 0.34
PRDM16-206ENST00000511072 ZC3H6P61129 1189 aaKnown RBP17.19■□□□□ 0.34
PRDM16-206ENST00000511072 AKAP17AQ02040 695 aaKnown RBP17.19■□□□□ 0.34
PRDM16-206ENST00000511072 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
PRDM16-206ENST00000511072 UQCRHLA0A096LP55 91 aa17.19■□□□□ 0.34
PRDM16-206ENST00000511072 UQCRHP07919 91 aa17.19■□□□□ 0.34
PRDM16-206ENST00000511072 PLEKHO1Q53GL0 409 aaPredicted RBP17.19■□□□□ 0.34
PRDM16-206ENST00000511072 RAD21O60216 631 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 RARSP54136 660 aaKnown RBP17.18■□□□□ 0.34
PRDM16-206ENST00000511072 TRDNQ13061 729 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 DNAJC2Q99543 621 aaKnown RBP17.18■□□□□ 0.34
PRDM16-206ENST00000511072 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
PRDM16-206ENST00000511072 SYNE3Q6ZMZ3 975 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 EXOC6BQ9Y2D4 811 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 CEBPAP49715 358 aaPredicted RBP17.18■□□□□ 0.34
PRDM16-206ENST00000511072 CHD1LQ86WJ1 897 aa17.18■□□□□ 0.34
PRDM16-206ENST00000511072 MYL6BP14649 208 aa17.17■□□□□ 0.34
PRDM16-206ENST00000511072 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
PRDM16-206ENST00000511072 MARCH6O60337 910 aa17.17■□□□□ 0.34
PRDM16-206ENST00000511072 NFE2L2Q16236 605 aa17.17■□□□□ 0.34
PRDM16-206ENST00000511072 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
PRDM16-206ENST00000511072 ATAD2Q6PL18 1390 aa17.16■□□□□ 0.34
PRDM16-206ENST00000511072 RPRD2Q5VT52 1461 aaKnown RBP17.16■□□□□ 0.34
PRDM16-206ENST00000511072 RPGRIP1LQ68CZ1 1315 aa17.16■□□□□ 0.34
PRDM16-206ENST00000511072 LRRFIP1Q32MZ4 808 aaKnown RBP17.16■□□□□ 0.34
PRDM16-206ENST00000511072 VPS53Q5VIR6 699 aa17.16■□□□□ 0.34
PRDM16-206ENST00000511072 PRPF40AO75400 957 aaKnown RBP17.16■□□□□ 0.34
PRDM16-206ENST00000511072 NASPP49321 788 aaPredicted RBP17.16■□□□□ 0.34
PRDM16-206ENST00000511072 DUSP27Q5VZP5 1158 aa17.16■□□□□ 0.34
PRDM16-206ENST00000511072 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
PRDM16-206ENST00000511072 SRCIN1Q9C0H9 1055 aa17.15■□□□□ 0.34
PRDM16-206ENST00000511072 CNTROBQ8N137 903 aa17.15■□□□□ 0.34
PRDM16-206ENST00000511072 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
PRDM16-206ENST00000511072 SRGAP3O43295 1099 aa17.15■□□□□ 0.34
PRDM16-206ENST00000511072 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
PRDM16-206ENST00000511072 ZNF592Q92610 1267 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms