RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 TMPOP42166 694 aaKnown RBP18.24■□□□□ 0.51
AP003555.1-202ENST00000511013 RWDD1Q9H446 243 aaPredicted RBP18.24■□□□□ 0.51
AP003555.1-202ENST00000511013 KIF20BQ96Q89 1820 aa18.24■□□□□ 0.51
AP003555.1-202ENST00000511013 ARHGEF40Q8TER5 1519 aa18.23■□□□□ 0.51
AP003555.1-202ENST00000511013 ZKSCAN2Q63HK3 967 aa18.23■□□□□ 0.51
AP003555.1-202ENST00000511013 NLRP1Q9C000 1473 aa18.22■□□□□ 0.51
AP003555.1-202ENST00000511013 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
AP003555.1-202ENST00000511013 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
AP003555.1-202ENST00000511013 CYB5RLQ6IPT4 315 aa18.22■□□□□ 0.51
AP003555.1-202ENST00000511013 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
AP003555.1-202ENST00000511013 RLBP1P12271 317 aa18.21■□□□□ 0.51
AP003555.1-202ENST00000511013 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
AP003555.1-202ENST00000511013 DZIP1LQ8IYY4 767 aaKnown RBP18.2■□□□□ 0.5
AP003555.1-202ENST00000511013 BCL2L13Q9BXK5 485 aa18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 CABP1Q9NZU7 370 aa18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 DIP2BQ9P265 1576 aa18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 TRIM35Q9UPQ4 493 aa18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 ATP7BP35670 1465 aa18.19■□□□□ 0.5
AP003555.1-202ENST00000511013 SPATA31D1Q6ZQQ2 1576 aa18.18■□□□□ 0.5
AP003555.1-202ENST00000511013 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
AP003555.1-202ENST00000511013 A2ML1A8K2U0 1454 aa18.18■□□□□ 0.5
AP003555.1-202ENST00000511013 RIMS2Q9UQ26 1411 aa18.18■□□□□ 0.5
AP003555.1-202ENST00000511013 FCHSD2O94868 740 aa18.17■□□□□ 0.5
AP003555.1-202ENST00000511013 EXOSC9Q06265 439 aaKnown RBP18.17■□□□□ 0.5
AP003555.1-202ENST00000511013 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
AP003555.1-202ENST00000511013 RIPK4P57078 832 aa18.17■□□□□ 0.5
AP003555.1-202ENST00000511013 CDC42BPGQ6DT37 1551 aa18.17■□□□□ 0.5
AP003555.1-202ENST00000511013 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
AP003555.1-202ENST00000511013 TNNQ9UQP3 1299 aa18.16■□□□□ 0.5
AP003555.1-202ENST00000511013 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.15■□□□□ 0.5
AP003555.1-202ENST00000511013 PDZRN3Q9UPQ7 1066 aa18.15■□□□□ 0.5
AP003555.1-202ENST00000511013 TSPOAP1O95153 1857 aa18.15■□□□□ 0.5
AP003555.1-202ENST00000511013 DDX19BQ9UMR2 479 aa18.14■□□□□ 0.5
AP003555.1-202ENST00000511013 IPO8O15397 1037 aaKnown RBP18.14■□□□□ 0.49
AP003555.1-202ENST00000511013 SETD1AO15047 1707 aaKnown RBP18.14■□□□□ 0.49
AP003555.1-202ENST00000511013 SLC4A3P48751 1232 aa18.13■□□□□ 0.49
AP003555.1-202ENST00000511013 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
AP003555.1-202ENST00000511013 BECN1Q14457 450 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 ATF7IPQ6VMQ6 1270 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 SSH1Q8WYL5 1049 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 USP19O94966 1318 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 KIF16BQ96L93 1317 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 ALDH1L2Q3SY69 923 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 ZNF428Q96B54 188 aa18.12■□□□□ 0.49
AP003555.1-202ENST00000511013 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 CALD1Q05682 793 aaKnown RBP18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 HDAC1Q13547 482 aaPredicted RBP18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 NFKBIBQ15653 356 aa18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 WAPLQ7Z5K2 1190 aa18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 RIMBP3CA6NJZ7 1639 aa18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 RIMBP3BA6NNM3 1639 aa18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 RIMBP3Q9UFD9 1639 aa18.11■□□□□ 0.49
AP003555.1-202ENST00000511013 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
AP003555.1-202ENST00000511013 POLKQ9UBT6 870 aa18.1■□□□□ 0.49
AP003555.1-202ENST00000511013 MAP2P11137 1827 aaKnown RBP18.1■□□□□ 0.49
AP003555.1-202ENST00000511013 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
AP003555.1-202ENST00000511013 TRIM27P14373 513 aa18.09■□□□□ 0.49
AP003555.1-202ENST00000511013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.09■□□□□ 0.49
AP003555.1-202ENST00000511013 RSPH6AQ9H0K4 717 aa18.09■□□□□ 0.49
AP003555.1-202ENST00000511013 FAM135BQ49AJ0 1406 aa18.09■□□□□ 0.49
AP003555.1-202ENST00000511013 WASLO00401 505 aaPredicted RBP18.08■□□□□ 0.48
AP003555.1-202ENST00000511013 NOB1Q9ULX3 412 aaKnown RBP18.08■□□□□ 0.48
AP003555.1-202ENST00000511013 LRRC7Q96NW7 1537 aa18.08■□□□□ 0.48
AP003555.1-202ENST00000511013 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
AP003555.1-202ENST00000511013 ITPRIPQ8IWB1 547 aa18.07■□□□□ 0.48
AP003555.1-202ENST00000511013 PRKAR2BP31323 418 aa18.07■□□□□ 0.48
AP003555.1-202ENST00000511013 BRPF1P55201 1214 aaPredicted RBP18.07■□□□□ 0.48
AP003555.1-202ENST00000511013 NFE2L2Q16236 605 aa18.07■□□□□ 0.48
AP003555.1-202ENST00000511013 PPIP5K1Q6PFW1 1433 aa18.06■□□□□ 0.48
AP003555.1-202ENST00000511013 SEC24BO95487 1268 aa18.06■□□□□ 0.48
AP003555.1-202ENST00000511013 CHMP4BQ9H444 224 aaKnown RBP18.06■□□□□ 0.48
AP003555.1-202ENST00000511013 ESF1Q9H501 851 aaKnown RBP18.06■□□□□ 0.48
AP003555.1-202ENST00000511013 AATKQ6ZMQ8 1374 aa18.06■□□□□ 0.48
AP003555.1-202ENST00000511013 KNDC1Q76NI1 1749 aa18.06■□□□□ 0.48
AP003555.1-202ENST00000511013 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
AP003555.1-202ENST00000511013 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
AP003555.1-202ENST00000511013 MLECQ14165 292 aa18.03■□□□□ 0.48
AP003555.1-202ENST00000511013 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
AP003555.1-202ENST00000511013 ZBTB40Q9NUA8 1239 aa18.03■□□□□ 0.48
AP003555.1-202ENST00000511013 GNAI1P63096 354 aa18.02■□□□□ 0.48
AP003555.1-202ENST00000511013 LMOD3Q0VAK6 560 aa18.02■□□□□ 0.48
AP003555.1-202ENST00000511013 SMC5Q8IY18 1101 aa18.02■□□□□ 0.48
AP003555.1-202ENST00000511013 TMEM57Q8N5G2 664 aa18.02■□□□□ 0.48
AP003555.1-202ENST00000511013 NUDT16Q96DE0 195 aaKnown RBP18.02■□□□□ 0.48
AP003555.1-202ENST00000511013 ZNF692Q9BU19 519 aaPredicted RBP18.02■□□□□ 0.47
AP003555.1-202ENST00000511013 CCDC61Q9Y6R9 512 aa18.02■□□□□ 0.47
AP003555.1-202ENST00000511013 TECPR2O15040 1411 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 MON2Q7Z3U7 1717 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 IL13P35225 146 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 GSE1Q14687 1217 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 ARHGAP45Q92619 1136 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 COG3Q96JB2 828 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 IFT57Q9NWB7 429 aa18.01■□□□□ 0.47
AP003555.1-202ENST00000511013 METP08581 1390 aa18■□□□□ 0.47
AP003555.1-202ENST00000511013 TXNDC2Q86VQ3 553 aa17.99■□□□□ 0.47
AP003555.1-202ENST00000511013 NME9Q86XW9 330 aa17.99■□□□□ 0.47
AP003555.1-202ENST00000511013 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
AP003555.1-202ENST00000511013 ITSN1Q15811 1721 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms