RNA–Protein interactions for RNA: ENST00000510196.6

GYPB-211, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 508 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-211ENST00000510196 LINC01559Q495D7 138 aa7.08□□□□□ -1.28
GYPB-211ENST00000510196 ZNF511Q8NB15 262 aa7.08□□□□□ -1.28
GYPB-211ENST00000510196 C6orf229H3BNL8 230 aa7.07□□□□□ -1.28
GYPB-211ENST00000510196 FOXK2Q01167 660 aa7.07□□□□□ -1.28
GYPB-211ENST00000510196 MAP2K5Q13163 448 aa7.07□□□□□ -1.28
GYPB-211ENST00000510196 FDX1P10109 184 aa7.06□□□□□ -1.28
GYPB-211ENST00000510196 C6orf118Q5T5N4 469 aa7.06□□□□□ -1.28
GYPB-211ENST00000510196 CNTNAP3BQ96NU0 1288 aa7.06□□□□□ -1.28
GYPB-211ENST00000510196 CDK15Q96Q40 435 aa7.06□□□□□ -1.28
GYPB-211ENST00000510196 CNTNAP3Q9BZ76 1288 aa7.06□□□□□ -1.28
GYPB-211ENST00000510196 DNMT3AQ9Y6K1 912 aaPredicted RBP7.06□□□□□ -1.28
GYPB-211ENST00000510196 IRF6O14896 467 aa7.05□□□□□ -1.28
GYPB-211ENST00000510196 SPTLC1O15269 473 aa7.05□□□□□ -1.28
GYPB-211ENST00000510196 ZIC2O95409 532 aaPredicted RBP7.05□□□□□ -1.28
GYPB-211ENST00000510196 NR5A1Q13285 461 aa7.05□□□□□ -1.28
GYPB-211ENST00000510196 GPAT2Q6NUI2 795 aa7.05□□□□□ -1.28
GYPB-211ENST00000510196 BMP2P12643 396 aa7.04□□□□□ -1.28
GYPB-211ENST00000510196 KANK3Q6NY19 840 aa7.04□□□□□ -1.28
GYPB-211ENST00000510196 MINK1Q8N4C8 1332 aaPredicted RBP7.03□□□□□ -1.28
GYPB-211ENST00000510196 CLCN1P35523 988 aa7.03□□□□□ -1.28
GYPB-211ENST00000510196 DESI1Q6ICB0 168 aa7.03□□□□□ -1.28
GYPB-211ENST00000510196 GPCPD1Q9NPB8 672 aa7.03□□□□□ -1.28
GYPB-211ENST00000510196 SPDYE5A6NIY4 337 aa7.02□□□□□ -1.29
GYPB-211ENST00000510196 MARSP56192 900 aaKnown RBP7.02□□□□□ -1.29
GYPB-211ENST00000510196 ARID5BQ14865 1188 aa7.02□□□□□ -1.29
GYPB-211ENST00000510196 KRI1Q8N9T8 703 aaKnown RBP7.02□□□□□ -1.29
GYPB-211ENST00000510196 ZFAND3Q9H8U3 227 aa7.02□□□□□ -1.29
GYPB-211ENST00000510196 SOS2Q07890 1332 aaPredicted RBP7.01□□□□□ -1.29
GYPB-211ENST00000510196 NISCHQ9Y2I1 1504 aa7.01□□□□□ -1.29
GYPB-211ENST00000510196 IRS1P35568 1242 aa7.01□□□□□ -1.29
GYPB-211ENST00000510196 KRT76Q01546 638 aa7.01□□□□□ -1.29
GYPB-211ENST00000510196 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.01□□□□□ -1.29
GYPB-211ENST00000510196 SVOPQ8N4V2 548 aa7.01□□□□□ -1.29
GYPB-211ENST00000510196 GPR161Q8N6U8 529 aaKnown RBP7.01□□□□□ -1.29
GYPB-211ENST00000510196 NANOS1Q8WY41 292 aaKnown RBP7.01□□□□□ -1.29
GYPB-211ENST00000510196 ITPKCQ96DU7 683 aa7.01□□□□□ -1.29
GYPB-211ENST00000510196 SCARF2Q96GP6 870 aaPredicted RBP7.01□□□□□ -1.29
GYPB-211ENST00000510196 FAM217BQ9NTX9 383 aaPredicted RBP7.01□□□□□ -1.29
GYPB-211ENST00000510196 PCDHGC3Q9UN70 934 aa7.01□□□□□ -1.29
GYPB-211ENST00000510196 ZNF385CQ66K41 422 aaPredicted RBP7□□□□□ -1.29
GYPB-211ENST00000510196 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
GYPB-211ENST00000510196 PRR7Q8TB68 274 aa7□□□□□ -1.29
GYPB-211ENST00000510196 TSEN34Q9BSV6 310 aaKnown RBP7□□□□□ -1.29
GYPB-211ENST00000510196 COL25A1Q9BXS0 654 aaPredicted RBP7□□□□□ -1.29
GYPB-211ENST00000510196 CTHP32929 405 aa6.98□□□□□ -1.29
GYPB-211ENST00000510196 MEIOBQ8N635 442 aa6.98□□□□□ -1.29
GYPB-211ENST00000510196 DNMT3LQ9UJW3 386 aa6.98□□□□□ -1.29
GYPB-211ENST00000510196 ARHGEF15O94989 841 aa6.97□□□□□ -1.29
GYPB-211ENST00000510196 SLURP2P0DP57 97 aa6.97□□□□□ -1.29
GYPB-211ENST00000510196 GRM5P41594 1212 aa6.97□□□□□ -1.29
GYPB-211ENST00000510196 PTSQ03393 145 aa6.96□□□□□ -1.3
GYPB-211ENST00000510196 MTMR2Q13614 643 aa6.96□□□□□ -1.3
GYPB-211ENST00000510196 AGERQ15109 404 aa6.96□□□□□ -1.3
GYPB-211ENST00000510196 XP32Q5T750 250 aa6.96□□□□□ -1.3
GYPB-211ENST00000510196 LYPD8Q6UX82 237 aa6.96□□□□□ -1.3
GYPB-211ENST00000510196 TTLL8A6PVC2 850 aa6.95□□□□□ -1.3
GYPB-211ENST00000510196 NR3C2P08235 984 aa6.95□□□□□ -1.3
GYPB-211ENST00000510196 BPHLQ86WA6 291 aaPredicted RBP6.95□□□□□ -1.3
GYPB-211ENST00000510196 SPIRE2Q8WWL2 714 aa6.95□□□□□ -1.3
GYPB-211ENST00000510196 FOXJ1Q92949 421 aa6.95□□□□□ -1.3
GYPB-211ENST00000510196 TULP1O00294 542 aaPredicted RBP6.94□□□□□ -1.3
GYPB-211ENST00000510196 SV2AQ7L0J3 742 aa6.94□□□□□ -1.3
GYPB-211ENST00000510196 EMILIN1Q9Y6C2 1016 aa6.94□□□□□ -1.3
GYPB-211ENST00000510196 NDUFV2P19404 249 aa6.93□□□□□ -1.3
GYPB-211ENST00000510196 CCDC155Q8N6L0 562 aa6.93□□□□□ -1.3
GYPB-211ENST00000510196 MSTNO14793 375 aa6.92□□□□□ -1.3
GYPB-211ENST00000510196 SSTR3P32745 418 aaPredicted RBP6.92□□□□□ -1.3
GYPB-211ENST00000510196 WHAMMQ8TF30 809 aa6.92□□□□□ -1.3
GYPB-211ENST00000510196 CCDC102AQ96A19 550 aa6.92□□□□□ -1.3
GYPB-211ENST00000510196 ENAMQ9NRM1 1142 aa6.92□□□□□ -1.3
GYPB-211ENST00000510196 MOXD2PA6NHM9 499 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 FIGNL2A6NMB9 653 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 ADAM23O75077 832 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 GJA5P36382 358 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 RNFT1Q5M7Z0 435 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 VWA5B2Q8N398 1253 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 ARMC2Q8NEN0 867 aa6.91□□□□□ -1.3
GYPB-211ENST00000510196 RTN4Q9NQC3 1192 aaKnown RBP6.91□□□□□ -1.3
GYPB-211ENST00000510196 SLC35F4A4IF30 521 aa6.9□□□□□ -1.3
GYPB-211ENST00000510196 MAP4K5Q9Y4K4 846 aa6.9□□□□□ -1.3
GYPB-211ENST00000510196 PHF20L1A8MW92 1017 aa6.89□□□□□ -1.31
GYPB-211ENST00000510196 ITGA6P23229 1130 aa6.89□□□□□ -1.31
GYPB-211ENST00000510196 DIXDC1Q155Q3 683 aa6.89□□□□□ -1.31
GYPB-211ENST00000510196 C4orf48Q5BLP8 95 aa6.88□□□□□ -1.31
GYPB-211ENST00000510196 VASH1Q7L8A9 365 aaPredicted RBP6.88□□□□□ -1.31
GYPB-211ENST00000510196 CCDC116Q8IYX3 515 aa6.88□□□□□ -1.31
GYPB-211ENST00000510196 CDC14CA4D256 554 aa6.87□□□□□ -1.31
GYPB-211ENST00000510196 SPINT1O43278 529 aa6.87□□□□□ -1.31
GYPB-211ENST00000510196 F12P00748 615 aaPredicted RBP6.87□□□□□ -1.31
GYPB-211ENST00000510196 PGPEP1Q9NXJ5 209 aa6.87□□□□□ -1.31
GYPB-211ENST00000510196 ADAMTS2O95450 1211 aa6.86□□□□□ -1.31
GYPB-211ENST00000510196 FSHRP23945 695 aa6.86□□□□□ -1.31
GYPB-211ENST00000510196 SRSF11Q05519 484 aaKnown RBP6.86□□□□□ -1.31
GYPB-211ENST00000510196 LYPD4Q6UWN0 246 aa6.86□□□□□ -1.31
GYPB-211ENST00000510196 BEND7Q8N7W2 519 aaPredicted RBP6.86□□□□□ -1.31
GYPB-211ENST00000510196 MAP10Q9P2G4 905 aa6.86□□□□□ -1.31
GYPB-211ENST00000510196 PLA2G4EQ3MJ16 856 aa6.85□□□□□ -1.31
GYPB-211ENST00000510196 Q6ZVU0 165 aa6.85□□□□□ -1.31
GYPB-211ENST00000510196 TRMT44Q8IYL2 757 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms