RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 LHX8Q68G74 356 aa15.14■□□□□ 0.01
PTPN20-223ENST00000509900 PROM2Q8N271 834 aa15.14■□□□□ 0.01
PTPN20-223ENST00000509900 CCDC9Q9Y3X0 531 aaKnown RBP15.14■□□□□ 0.01
PTPN20-223ENST00000509900 ANKRD50Q9ULJ7 1429 aa15.14■□□□□ 0.01
PTPN20-223ENST00000509900 CEP350Q5VT06 3117 aa15.13■□□□□ 0.01
PTPN20-223ENST00000509900 ADGRB2O60241 1585 aa15.13■□□□□ 0.01
PTPN20-223ENST00000509900 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
PTPN20-223ENST00000509900 DCBLD2Q96PD2 775 aa15.13■□□□□ 0.01
PTPN20-223ENST00000509900 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
PTPN20-223ENST00000509900 A0A0G2JS52 829 aa15.12■□□□□ 0.01
PTPN20-223ENST00000509900 MNX1P50219 401 aaPredicted RBP15.12■□□□□ 0.01
PTPN20-223ENST00000509900 MYT1Q01538 1121 aa15.12■□□□□ 0.01
PTPN20-223ENST00000509900 NEXMIFQ5QGS0 1516 aa15.11■□□□□ 0.01
PTPN20-223ENST00000509900 SPATA31A3Q5VYP0 1347 aa15.11■□□□□ 0.01
PTPN20-223ENST00000509900 PRAG1Q86YV5 1406 aa15.1■□□□□ 0.01
PTPN20-223ENST00000509900 THSD7AQ9UPZ6 1657 aa15.1■□□□□ 0.01
PTPN20-223ENST00000509900 FAM98CQ17RN3 349 aaKnown RBP15.1■□□□□ 0.01
PTPN20-223ENST00000509900 PPP1R1BQ9UD71 204 aaPredicted RBP15.1■□□□□ 0.01
PTPN20-223ENST00000509900 UTRNP46939 3433 aa15.1■□□□□ 0.01
PTPN20-223ENST00000509900 SPON1Q9HCB6 807 aa15.08■□□□□ 0
PTPN20-223ENST00000509900 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
PTPN20-223ENST00000509900 CABLES1Q8TDN4 633 aa15.07■□□□□ 0
PTPN20-223ENST00000509900 PHF12Q96QT6 1004 aa15.07■□□□□ 0
PTPN20-223ENST00000509900 PARD3Q8TEW0 1356 aa15.07■□□□□ 0
PTPN20-223ENST00000509900 HFM1A2PYH4 1435 aa15.07■□□□□ 0
PTPN20-223ENST00000509900 KIF1AQ12756 1690 aa15.06■□□□□ 0
PTPN20-223ENST00000509900 KCNQ2O43526 872 aa15.06■□□□□ 0
PTPN20-223ENST00000509900 GALR2O43603 387 aaPredicted RBP15.06■□□□□ 0
PTPN20-223ENST00000509900 ZNF326Q5BKZ1 582 aaKnown RBP15.06■□□□□ 0
PTPN20-223ENST00000509900 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
PTPN20-223ENST00000509900 RGPD8O14715 1765 aaPredicted RBP15.05■□□□□ -0
PTPN20-223ENST00000509900 TRIM37O94972 964 aa15.04■□□□□ -0
PTPN20-223ENST00000509900 FMN2Q9NZ56 1722 aa15.03■□□□□ -0
PTPN20-223ENST00000509900 NRKQ7Z2Y5 1582 aa15.03■□□□□ -0
PTPN20-223ENST00000509900 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
PTPN20-223ENST00000509900 FAM83GA6ND36 823 aa15.03■□□□□ -0
PTPN20-223ENST00000509900 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
PTPN20-223ENST00000509900 CASZ1Q86V15 1759 aa15.03■□□□□ -0
PTPN20-223ENST00000509900 TNS3Q68CZ2 1445 aa15.02■□□□□ -0
PTPN20-223ENST00000509900 NUTM2FA1L443 756 aa15.02■□□□□ -0
PTPN20-223ENST00000509900 MYOM1P52179 1685 aa15.02□□□□□ -0.01
PTPN20-223ENST00000509900 KIF1BO60333 1816 aa15.01□□□□□ -0.01
PTPN20-223ENST00000509900 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
PTPN20-223ENST00000509900 APBA3O96018 575 aa15.01□□□□□ -0.01
PTPN20-223ENST00000509900 CLTCL1P53675 1640 aa15.01□□□□□ -0.01
PTPN20-223ENST00000509900 NAIPQ13075 1403 aa15□□□□□ -0.01
PTPN20-223ENST00000509900 KRT28Q7Z3Y7 464 aa15□□□□□ -0.01
PTPN20-223ENST00000509900 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
PTPN20-223ENST00000509900 NBPF8Q3BBV2 869 aa14.99□□□□□ -0.01
PTPN20-223ENST00000509900 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
PTPN20-223ENST00000509900 SPATA31A5Q5VU36 1347 aa14.97□□□□□ -0.01
PTPN20-223ENST00000509900 SPATA31A7Q8IWB4 1347 aa14.97□□□□□ -0.01
PTPN20-223ENST00000509900 FAM196AQ6ZSG2 479 aa14.97□□□□□ -0.01
PTPN20-223ENST00000509900 BTG4Q9NY30 223 aa14.97□□□□□ -0.01
PTPN20-223ENST00000509900 IFT172Q9UG01 1749 aa14.95□□□□□ -0.02
PTPN20-223ENST00000509900 GIGYF1O75420 1035 aaPredicted RBP14.93□□□□□ -0.02
PTPN20-223ENST00000509900 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
PTPN20-223ENST00000509900 NUP155O75694 1391 aa14.93□□□□□ -0.02
PTPN20-223ENST00000509900 PPLO60437 1756 aa14.93□□□□□ -0.02
PTPN20-223ENST00000509900 CRYBG1Q9Y4K1 1723 aa14.92□□□□□ -0.02
PTPN20-223ENST00000509900 ARHGEF10O15013 1369 aa14.92□□□□□ -0.02
PTPN20-223ENST00000509900 RGPD3A6NKT7 1758 aaPredicted RBP14.92□□□□□ -0.02
PTPN20-223ENST00000509900 RGPD4Q7Z3J3 1758 aa14.92□□□□□ -0.02
PTPN20-223ENST00000509900 RRBP1Q9P2E9 1410 aaKnown RBP14.92□□□□□ -0.02
PTPN20-223ENST00000509900 LMOD2Q6P5Q4 547 aa14.91□□□□□ -0.02
PTPN20-223ENST00000509900 MIER1Q8N108 512 aa14.91□□□□□ -0.02
PTPN20-223ENST00000509900 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
PTPN20-223ENST00000509900 TRPM3Q9HCF6 1732 aaPredicted RBP14.91□□□□□ -0.02
PTPN20-223ENST00000509900 PTGER2P43116 358 aa14.9□□□□□ -0.02
PTPN20-223ENST00000509900 PSME1Q06323 249 aa14.9□□□□□ -0.02
PTPN20-223ENST00000509900 WAPLQ7Z5K2 1190 aa14.9□□□□□ -0.02
PTPN20-223ENST00000509900 PDGFDQ9GZP0 370 aaPredicted RBP14.9□□□□□ -0.02
PTPN20-223ENST00000509900 ALS2Q96Q42 1657 aa14.9□□□□□ -0.02
PTPN20-223ENST00000509900 KNDC1Q76NI1 1749 aa14.89□□□□□ -0.03
PTPN20-223ENST00000509900 VGFO15240 615 aaPredicted RBP14.89□□□□□ -0.03
PTPN20-223ENST00000509900 SYT17Q9BSW7 474 aa14.89□□□□□ -0.03
PTPN20-223ENST00000509900 SHANK3Q9BYB0 1731 aa14.89□□□□□ -0.03
PTPN20-223ENST00000509900 NRXN1Q9ULB1 1477 aa14.89□□□□□ -0.03
PTPN20-223ENST00000509900 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
PTPN20-223ENST00000509900 SBF2Q86WG5 1849 aa14.88□□□□□ -0.03
PTPN20-223ENST00000509900 FHDC1Q9C0D6 1143 aaPredicted RBP14.88□□□□□ -0.03
PTPN20-223ENST00000509900 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
PTPN20-223ENST00000509900 TECPR2O15040 1411 aa14.88□□□□□ -0.03
PTPN20-223ENST00000509900 SPATA31A1Q5TZJ5 1347 aa14.88□□□□□ -0.03
PTPN20-223ENST00000509900 ANO8Q9HCE9 1232 aaPredicted RBP14.87□□□□□ -0.03
PTPN20-223ENST00000509900 DLC1Q96QB1 1528 aa14.87□□□□□ -0.03
PTPN20-223ENST00000509900 ZBTB7AO95365 584 aa14.86□□□□□ -0.03
PTPN20-223ENST00000509900 FAM50AQ14320 339 aaKnown RBP14.86□□□□□ -0.03
PTPN20-223ENST00000509900 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
PTPN20-223ENST00000509900 STK26Q9P289 416 aa14.83□□□□□ -0.04
PTPN20-223ENST00000509900 FKBP8Q14318 412 aa14.82□□□□□ -0.04
PTPN20-223ENST00000509900 PEAK1Q9H792 1746 aa14.82□□□□□ -0.04
PTPN20-223ENST00000509900 ROCK1Q13464 1354 aa14.82□□□□□ -0.04
PTPN20-223ENST00000509900 PDE3BQ13370 1112 aa14.81□□□□□ -0.04
PTPN20-223ENST00000509900 PLCD3Q8N3E9 789 aa14.8□□□□□ -0.04
PTPN20-223ENST00000509900 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
PTPN20-223ENST00000509900 SGIP1Q9BQI5 828 aa14.79□□□□□ -0.04
PTPN20-223ENST00000509900 PRDM11Q9NQV5 511 aa14.79□□□□□ -0.04
PTPN20-223ENST00000509900 PARP4Q9UKK3 1724 aaKnown RBP14.79□□□□□ -0.04
PTPN20-223ENST00000509900 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms