RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 FRAT2O75474 233 aaPredicted RBP6.47□□□□□ -1.37
PHF3-210ENST00000509876 TMOD3Q9NYL9 352 aa6.46□□□□□ -1.37
PHF3-210ENST00000509876 TTC21BQ7Z4L5 1316 aa6.46□□□□□ -1.37
PHF3-210ENST00000509876 SLAIN2Q9P270 581 aa6.46□□□□□ -1.38
PHF3-210ENST00000509876 ARHGEF40Q8TER5 1519 aa6.46□□□□□ -1.38
PHF3-210ENST00000509876 RCAN3Q9UKA8 241 aa6.46□□□□□ -1.38
PHF3-210ENST00000509876 A2ML1A8K2U0 1454 aa6.46□□□□□ -1.38
PHF3-210ENST00000509876 ARHGEF10O15013 1369 aa6.46□□□□□ -1.38
PHF3-210ENST00000509876 APAF1O14727 1248 aa6.46□□□□□ -1.38
PHF3-210ENST00000509876 KCNJ4P48050 445 aa6.45□□□□□ -1.38
PHF3-210ENST00000509876 RTL5Q5HYW3 569 aaPredicted RBP6.45□□□□□ -1.38
PHF3-210ENST00000509876 C9orf78Q9NZ63 289 aaPredicted RBP6.45□□□□□ -1.38
PHF3-210ENST00000509876 RIC3Q7Z5B4 369 aa6.45□□□□□ -1.38
PHF3-210ENST00000509876 ELL2O00472 640 aaPredicted RBP6.45□□□□□ -1.38
PHF3-210ENST00000509876 PUS7Q96PZ0 661 aaKnown RBP6.45□□□□□ -1.38
PHF3-210ENST00000509876 SUPT16HQ9Y5B9 1047 aaKnown RBP6.45□□□□□ -1.38
PHF3-210ENST00000509876 LTKP29376 864 aa6.45□□□□□ -1.38
PHF3-210ENST00000509876 ANKRD36BQ8N2N9 1353 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 CCDC30Q5VVM6 783 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 RWDD1Q9H446 243 aaPredicted RBP6.44□□□□□ -1.38
PHF3-210ENST00000509876 PPP1R1BQ9UD71 204 aaPredicted RBP6.44□□□□□ -1.38
PHF3-210ENST00000509876 TET3O43151 1660 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 ANKRD24Q8TF21 1146 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 NECTIN2Q92692 538 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 SIRT1Q96EB6 747 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 API5Q9BZZ5 524 aaKnown RBP6.44□□□□□ -1.38
PHF3-210ENST00000509876 GNAT3A8MTJ3 354 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 TMEM94Q12767 1356 aa6.44□□□□□ -1.38
PHF3-210ENST00000509876 FCHSD2O94868 740 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 STARD3NLO95772 234 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 ARHGAP31Q2M1Z3 1444 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 PIK3R4Q99570 1358 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 FKBP5Q13451 457 aaPredicted RBP6.43□□□□□ -1.38
PHF3-210ENST00000509876 CDC42BPBQ9Y5S2 1711 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 BTBD11A6QL63 1104 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 CHRNA2Q15822 529 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 CDCA7Q9BWT1 371 aaPredicted RBP6.43□□□□□ -1.38
PHF3-210ENST00000509876 ZKSCAN2Q63HK3 967 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 NOL10Q9BSC4 688 aaKnown RBP6.43□□□□□ -1.38
PHF3-210ENST00000509876 APBB1O00213 710 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 FGD1P98174 961 aa6.43□□□□□ -1.38
PHF3-210ENST00000509876 AIMP1Q12904 312 aaKnown RBP6.43□□□□□ -1.38
PHF3-210ENST00000509876 DIP2CQ9Y2E4 1556 aa6.42□□□□□ -1.38
PHF3-210ENST00000509876 MCCP23508 829 aa6.42□□□□□ -1.38
PHF3-210ENST00000509876 VPS37DQ86XT2 251 aa6.42□□□□□ -1.38
PHF3-210ENST00000509876 ISY1Q9ULR0 285 aaKnown RBP6.42□□□□□ -1.38
PHF3-210ENST00000509876 KIF1BO60333 1816 aa6.42□□□□□ -1.38
PHF3-210ENST00000509876 CLTCQ00610 1675 aaKnown RBP6.42□□□□□ -1.38
PHF3-210ENST00000509876 ZNF652Q9Y2D9 606 aa6.42□□□□□ -1.38
PHF3-210ENST00000509876 PIK3C2GO75747 1445 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 AGLP35573 1532 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 DDB1Q16531 1140 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 IFNL2Q8IZJ0 200 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 ABCC11Q96J66 1382 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 ZPR1O75312 459 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 FBXW7Q969H0 707 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 DISP3Q9P2K9 1392 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 COL17A1Q9UMD9 1497 aaPredicted RBP6.41□□□□□ -1.38
PHF3-210ENST00000509876 KIF16BQ96L93 1317 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 CROCC2H7BZ55 1655 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 TCP11L2Q8N4U5 519 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 USHBP1Q8N6Y0 703 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 BCL11BQ9C0K0 894 aaPredicted RBP6.41□□□□□ -1.38
PHF3-210ENST00000509876 MAP3K4Q9Y6R4 1608 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 PTPRMP28827 1452 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 NBPF14Q5TI25 921 aa6.41□□□□□ -1.38
PHF3-210ENST00000509876 RIMS1Q86UR5 1692 aaKnown RBP6.4□□□□□ -1.38
PHF3-210ENST00000509876 ZNF772Q68DY9 489 aaPredicted RBP6.4□□□□□ -1.38
PHF3-210ENST00000509876 KIAA1211Q6ZU35 1233 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 AK7Q96M32 723 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 ZNF335Q9H4Z2 1342 aaPredicted RBP6.4□□□□□ -1.38
PHF3-210ENST00000509876 IQGAP3Q86VI3 1631 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 PPP4R2Q9NY27 417 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 EMILIN1Q9Y6C2 1016 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 IL2RBP14784 551 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 LRRFIP1Q32MZ4 808 aaKnown RBP6.4□□□□□ -1.38
PHF3-210ENST00000509876 MPRIPQ6WCQ1 1025 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 ZCRB1Q8TBF4 217 aaKnown RBP6.4□□□□□ -1.38
PHF3-210ENST00000509876 USP21Q9UK80 565 aa6.4□□□□□ -1.38
PHF3-210ENST00000509876 C11orf95C9JLR9 678 aaPredicted RBP6.4□□□□□ -1.39
PHF3-210ENST00000509876 CABLES1Q8TDN4 633 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 DDRGK1Q96HY6 314 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 TEX13AQ9BXU3 409 aaPredicted RBP6.4□□□□□ -1.39
PHF3-210ENST00000509876 TRIM34Q9BYJ4 488 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 ADAMTS8Q9UP79 889 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 ADGRB3O60242 1522 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 NFE2L2Q16236 605 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 AMOTL1Q8IY63 956 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 SMARCC1Q92922 1105 aaPredicted RBP6.4□□□□□ -1.39
PHF3-210ENST00000509876 BTG4Q9NY30 223 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 PRDM15P57071 1507 aaPredicted RBP6.4□□□□□ -1.39
PHF3-210ENST00000509876 A0A087WZG4 1122 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 CLUAP1Q96AJ1 413 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 ORAI2Q96SN7 254 aa6.4□□□□□ -1.39
PHF3-210ENST00000509876 ZC3H13Q5T200 1668 aaKnown RBP6.4□□□□□ -1.39
PHF3-210ENST00000509876 CAMSAP1Q5T5Y3 1602 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 MYOM2P54296 1465 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 INO80Q9ULG1 1556 aaPredicted RBP6.39□□□□□ -1.39
PHF3-210ENST00000509876 BECN1Q14457 450 aa6.39□□□□□ -1.39
PHF3-210ENST00000509876 RGS3P49796 1198 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms