RNA–Protein interactions for RNA: ENST00000509400.5

SIL1-212, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 4

Gene SIL1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-212ENST00000509400 CABP2Q9NPB3 220 aa15.94■□□□□ 0.14
SIL1-212ENST00000509400 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
SIL1-212ENST00000509400 ONECUT3O60422 494 aaPredicted RBP15.93■□□□□ 0.14
SIL1-212ENST00000509400 VPS72Q15906 364 aa15.93■□□□□ 0.14
SIL1-212ENST00000509400 PRR36Q9H6K5 1346 aa15.93■□□□□ 0.14
SIL1-212ENST00000509400 NWD2Q9ULI1 1742 aa15.92■□□□□ 0.14
SIL1-212ENST00000509400 PHF8Q9UPP1 1060 aa15.92■□□□□ 0.14
SIL1-212ENST00000509400 ARHGEF28Q8N1W1 1705 aaKnown RBP15.91■□□□□ 0.14
SIL1-212ENST00000509400 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
SIL1-212ENST00000509400 LRP5O75197 1615 aa15.9■□□□□ 0.14
SIL1-212ENST00000509400 FAM83GA6ND36 823 aa15.9■□□□□ 0.14
SIL1-212ENST00000509400 SRPK2P78362 688 aaKnown RBP15.9■□□□□ 0.14
SIL1-212ENST00000509400 EVC2Q86UK5 1308 aa15.9■□□□□ 0.14
SIL1-212ENST00000509400 C11orf95C9JLR9 678 aaPredicted RBP15.89■□□□□ 0.13
SIL1-212ENST00000509400 KRT27Q7Z3Y8 459 aa15.89■□□□□ 0.13
SIL1-212ENST00000509400 SBNO1A3KN83 1393 aa15.88■□□□□ 0.13
SIL1-212ENST00000509400 SBNO2Q9Y2G9 1366 aa15.88■□□□□ 0.13
SIL1-212ENST00000509400 NRAPQ86VF7 1730 aa15.88■□□□□ 0.13
SIL1-212ENST00000509400 PSDA5PKW4 1024 aaPredicted RBP15.88■□□□□ 0.13
SIL1-212ENST00000509400 HAP1P54257 671 aaPredicted RBP15.88■□□□□ 0.13
SIL1-212ENST00000509400 CCDC9Q9Y3X0 531 aaKnown RBP15.88■□□□□ 0.13
SIL1-212ENST00000509400 TMF1P82094 1093 aa15.87■□□□□ 0.13
SIL1-212ENST00000509400 SF3B2Q13435 895 aaKnown RBP15.87■□□□□ 0.13
SIL1-212ENST00000509400 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
SIL1-212ENST00000509400 PSME1Q06323 249 aa15.86■□□□□ 0.13
SIL1-212ENST00000509400 LMOD2Q6P5Q4 547 aa15.86■□□□□ 0.13
SIL1-212ENST00000509400 PMFBP1Q8TBY8 1022 aa15.86■□□□□ 0.13
SIL1-212ENST00000509400 TRPM3Q9HCF6 1732 aaPredicted RBP15.85■□□□□ 0.13
SIL1-212ENST00000509400 FAM98CQ17RN3 349 aaKnown RBP15.85■□□□□ 0.13
SIL1-212ENST00000509400 CCDC61Q9Y6R9 512 aa15.85■□□□□ 0.13
SIL1-212ENST00000509400 FAM182BQ5T319 152 aa15.84■□□□□ 0.13
SIL1-212ENST00000509400 CABP1Q9NZU7 370 aa15.84■□□□□ 0.13
SIL1-212ENST00000509400 ARHGEF10O15013 1369 aa15.84■□□□□ 0.13
SIL1-212ENST00000509400 POLR3GLQ9BT43 218 aa15.83■□□□□ 0.12
SIL1-212ENST00000509400 SLC12A5Q9H2X9 1139 aa15.83■□□□□ 0.12
SIL1-212ENST00000509400 ADGRB2O60241 1585 aa15.83■□□□□ 0.12
SIL1-212ENST00000509400 ALS2Q96Q42 1657 aa15.83■□□□□ 0.12
SIL1-212ENST00000509400 PLEKHG3A1L390 1219 aa15.82■□□□□ 0.12
SIL1-212ENST00000509400 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
SIL1-212ENST00000509400 EN1Q05925 392 aaPredicted RBP15.82■□□□□ 0.12
SIL1-212ENST00000509400 BTG4Q9NY30 223 aa15.82■□□□□ 0.12
SIL1-212ENST00000509400 QRICH2Q9H0J4 1663 aa15.82■□□□□ 0.12
SIL1-212ENST00000509400 A0A0G2JS52 829 aa15.81■□□□□ 0.12
SIL1-212ENST00000509400 BAG6P46379 1132 aa15.81■□□□□ 0.12
SIL1-212ENST00000509400 MYT1Q01538 1121 aa15.81■□□□□ 0.12
SIL1-212ENST00000509400 ANKARQ7Z5J8 1434 aa15.81■□□□□ 0.12
SIL1-212ENST00000509400 TMC1Q8TDI8 760 aa15.81■□□□□ 0.12
SIL1-212ENST00000509400 PUS7Q96PZ0 661 aaKnown RBP15.81■□□□□ 0.12
SIL1-212ENST00000509400 ATP7BP35670 1465 aa15.8■□□□□ 0.12
SIL1-212ENST00000509400 COL14A1Q05707 1796 aaKnown RBP15.8■□□□□ 0.12
SIL1-212ENST00000509400 CRYBG1Q9Y4K1 1723 aa15.8■□□□□ 0.12
SIL1-212ENST00000509400 ACEP12821 1306 aa15.79■□□□□ 0.12
SIL1-212ENST00000509400 CDCA8Q53HL2 280 aa15.79■□□□□ 0.12
SIL1-212ENST00000509400 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
SIL1-212ENST00000509400 TNS1Q9HBL0 1735 aaKnown RBP15.79■□□□□ 0.12
SIL1-212ENST00000509400 THSD7AQ9UPZ6 1657 aa15.79■□□□□ 0.12
SIL1-212ENST00000509400 SPATA31A5Q5VU36 1347 aa15.78■□□□□ 0.12
SIL1-212ENST00000509400 SPATA31A7Q8IWB4 1347 aa15.78■□□□□ 0.12
SIL1-212ENST00000509400 RGPD1P0DJD0 1748 aa15.78■□□□□ 0.12
SIL1-212ENST00000509400 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.12
SIL1-212ENST00000509400 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.12
SIL1-212ENST00000509400 R3HDM1Q15032 1099 aaKnown RBP15.77■□□□□ 0.12
SIL1-212ENST00000509400 EZH2Q15910 746 aaKnown RBP15.75■□□□□ 0.11
SIL1-212ENST00000509400 DISP2A7MBM2 1401 aa15.75■□□□□ 0.11
SIL1-212ENST00000509400 WASHC2AQ641Q2 1341 aa15.74■□□□□ 0.11
SIL1-212ENST00000509400 POLR3AO14802 1390 aaPredicted RBP15.73■□□□□ 0.11
SIL1-212ENST00000509400 CCDC7Q96M83 1385 aa15.73■□□□□ 0.11
SIL1-212ENST00000509400 CHRNA2Q15822 529 aa15.71■□□□□ 0.11
SIL1-212ENST00000509400 CAMKK2Q96RR4 588 aa15.71■□□□□ 0.11
SIL1-212ENST00000509400 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
SIL1-212ENST00000509400 SPATA31A1Q5TZJ5 1347 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 PAK3O75914 559 aaPredicted RBP15.7■□□□□ 0.1
SIL1-212ENST00000509400 TRIM37O94972 964 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 HDGFL2Q7Z4V5 671 aaPredicted RBP15.7■□□□□ 0.1
SIL1-212ENST00000509400 CARD14Q9BXL6 1004 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 PANK3Q9H999 370 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 PRDM11Q9NQV5 511 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 TERF2IPQ9NYB0 399 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 KIAA0232Q92628 1395 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 CD163L1Q9NR16 1453 aa15.7■□□□□ 0.1
SIL1-212ENST00000509400 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
SIL1-212ENST00000509400 PHRF1Q9P1Y6 1649 aaKnown RBP15.68■□□□□ 0.1
SIL1-212ENST00000509400 A0A1W2PP64 1363 aa15.68■□□□□ 0.1
SIL1-212ENST00000509400 NUTM2GQ5VZR2 741 aa15.68■□□□□ 0.1
SIL1-212ENST00000509400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.68■□□□□ 0.18e-7■■■■□ 23.2
SIL1-212ENST00000509400 TTC21BQ7Z4L5 1316 aa15.68■□□□□ 0.1
SIL1-212ENST00000509400 KTN1Q86UP2 1357 aaKnown RBP15.67■□□□□ 0.1
SIL1-212ENST00000509400 ZNF316A6NFI3 1004 aaPredicted RBP15.67■□□□□ 0.1
SIL1-212ENST00000509400 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
SIL1-212ENST00000509400 NINLQ9Y2I6 1382 aa15.66■□□□□ 0.1
SIL1-212ENST00000509400 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
SIL1-212ENST00000509400 STRN4Q9NRL3 753 aa15.66■□□□□ 0.1
SIL1-212ENST00000509400 USP6P35125 1406 aa15.66■□□□□ 0.1
SIL1-212ENST00000509400 SSH2Q76I76 1423 aa15.66■□□□□ 0.1
SIL1-212ENST00000509400 RREB1Q92766 1687 aa15.66■□□□□ 0.1
SIL1-212ENST00000509400 APBA3O96018 575 aa15.65■□□□□ 0.1
SIL1-212ENST00000509400 FAM196AQ6ZSG2 479 aa15.65■□□□□ 0.1
SIL1-212ENST00000509400 NUP188Q5SRE5 1749 aa15.65■□□□□ 0.1
SIL1-212ENST00000509400 TOPAZ1Q8N9V7 1692 aa15.64■□□□□ 0.09
SIL1-212ENST00000509400 NME9Q86XW9 330 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms