RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 ZNF692Q9BU19 519 aaPredicted RBP28.22■■■□□ 2.11
HOXC6-204ENST00000509328 PHF23Q9BUL5 403 aaPredicted RBP28.22■■■□□ 2.11
HOXC6-204ENST00000509328 MON2Q7Z3U7 1717 aa28.21■■■□□ 2.11
HOXC6-204ENST00000509328 TMC1Q8TDI8 760 aa28.21■■■□□ 2.11
HOXC6-204ENST00000509328 NINLQ9Y2I6 1382 aa28.21■■■□□ 2.11
HOXC6-204ENST00000509328 CPSF1Q10570 1443 aaKnown RBP28.2■■■□□ 2.11
HOXC6-204ENST00000509328 SLC12A5Q9H2X9 1139 aa28.18■■■□□ 2.1
HOXC6-204ENST00000509328 CRYBG1Q9Y4K1 1723 aa28.18■■■□□ 2.1
HOXC6-204ENST00000509328 CD163L1Q9NR16 1453 aa28.17■■■□□ 2.1
HOXC6-204ENST00000509328 SSH2Q76I76 1423 aa28.17■■■□□ 2.1
HOXC6-204ENST00000509328 NRKQ7Z2Y5 1582 aa28.16■■■□□ 2.1
HOXC6-204ENST00000509328 KTN1Q86UP2 1357 aaKnown RBP28.16■■■□□ 2.1
HOXC6-204ENST00000509328 ADAMTS2O95450 1211 aa28.15■■■□□ 2.1
HOXC6-204ENST00000509328 HDGFL2Q7Z4V5 671 aaPredicted RBP28.15■■■□□ 2.1
HOXC6-204ENST00000509328 TERF2IPQ9NYB0 399 aa28.15■■■□□ 2.1
HOXC6-204ENST00000509328 CABLES1Q8TDN4 633 aa28.14■■■□□ 2.1
HOXC6-204ENST00000509328 HAP1P54257 671 aaPredicted RBP28.13■■■□□ 2.09
HOXC6-204ENST00000509328 ABTB2Q8N961 1025 aa28.13■■■□□ 2.09
HOXC6-204ENST00000509328 PLEKHG5O94827 1062 aa28.12■■■□□ 2.09
HOXC6-204ENST00000509328 PHRF1Q9P1Y6 1649 aaKnown RBP28.11■■■□□ 2.09
HOXC6-204ENST00000509328 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
HOXC6-204ENST00000509328 MYOM1P52179 1685 aa28.11■■■□□ 2.09
HOXC6-204ENST00000509328 C8orf37Q96NL8 207 aa28.11■■■□□ 2.09
HOXC6-204ENST00000509328 RGS17Q9UGC6 210 aaPredicted RBP28.1■■■□□ 2.09
HOXC6-204ENST00000509328 TTC21BQ7Z4L5 1316 aa28.1■■■□□ 2.09
HOXC6-204ENST00000509328 TTC21AQ8NDW8 1320 aa28.1■■■□□ 2.09
HOXC6-204ENST00000509328 A0A1W2PP64 1363 aa28.1■■■□□ 2.09
HOXC6-204ENST00000509328 NUTM2GQ5VZR2 741 aa28.09■■■□□ 2.09
HOXC6-204ENST00000509328 NGLY1Q96IV0 654 aa28.08■■■□□ 2.09
HOXC6-204ENST00000509328 NLRP13Q86W25 1043 aa28.07■■■□□ 2.08
HOXC6-204ENST00000509328 ANKRD36BQ8N2N9 1353 aa28.07■■■□□ 2.08
HOXC6-204ENST00000509328 EDC4Q6P2E9 1401 aaKnown RBP28.07■■■□□ 2.08
HOXC6-204ENST00000509328 AFF2P51816 1311 aa28.06■■■□□ 2.08
HOXC6-204ENST00000509328 USP19O94966 1318 aa28.04■■■□□ 2.08
HOXC6-204ENST00000509328 NLRP6P59044 892 aa28.04■■■□□ 2.08
HOXC6-204ENST00000509328 ZNF772Q68DY9 489 aaPredicted RBP28.04■■■□□ 2.08
HOXC6-204ENST00000509328 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.02■■■□□ 2.08
HOXC6-204ENST00000509328 POLR3GLQ9BT43 218 aa28.02■■■□□ 2.08
HOXC6-204ENST00000509328 PLCH1Q4KWH8 1693 aa28.01■■■□□ 2.07
HOXC6-204ENST00000509328 USP54Q70EL1 1684 aa28.01■■■□□ 2.07
HOXC6-204ENST00000509328 FNBP4Q8N3X1 1017 aaPredicted RBP28.01■■■□□ 2.07
HOXC6-204ENST00000509328 COL14A1Q05707 1796 aaKnown RBP28■■■□□ 2.07
HOXC6-204ENST00000509328 SLIT3O75094 1523 aa27.99■■■□□ 2.07
HOXC6-204ENST00000509328 NWD2Q9ULI1 1742 aa27.99■■■□□ 2.07
HOXC6-204ENST00000509328 C11orf95C9JLR9 678 aaPredicted RBP27.99■■■□□ 2.07
HOXC6-204ENST00000509328 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.98■■■□□ 2.07
HOXC6-204ENST00000509328 POTEAQ6S8J7 498 aa27.98■■■□□ 2.07
HOXC6-204ENST00000509328 SLIT2O94813 1529 aa27.97■■■□□ 2.07
HOXC6-204ENST00000509328 USP21Q9UK80 565 aa27.97■■■□□ 2.07
HOXC6-204ENST00000509328 USP31Q70CQ4 1352 aa27.97■■■□□ 2.07
HOXC6-204ENST00000509328 FAM83GA6ND36 823 aa27.96■■■□□ 2.07
HOXC6-204ENST00000509328 GCP02774 474 aa27.96■■■□□ 2.07
HOXC6-204ENST00000509328 NME9Q86XW9 330 aa27.96■■■□□ 2.07
HOXC6-204ENST00000509328 BCL9LQ86UU0 1499 aa27.95■■■□□ 2.06
HOXC6-204ENST00000509328 KIAA0232Q92628 1395 aa27.94■■■□□ 2.06
HOXC6-204ENST00000509328 KIF20BQ96Q89 1820 aa27.93■■■□□ 2.06
HOXC6-204ENST00000509328 ZEB1P37275 1124 aaPredicted RBP27.93■■■□□ 2.06
HOXC6-204ENST00000509328 ZC3H6P61129 1189 aaKnown RBP27.93■■■□□ 2.06
HOXC6-204ENST00000509328 PRDM11Q9NQV5 511 aa27.93■■■□□ 2.06
HOXC6-204ENST00000509328 CPDO75976 1380 aa27.93■■■□□ 2.06
HOXC6-204ENST00000509328 KIF7Q2M1P5 1343 aa27.92■■■□□ 2.06
HOXC6-204ENST00000509328 KCNH5Q8NCM2 988 aa27.92■■■□□ 2.06
HOXC6-204ENST00000509328 ZRANB1Q9UGI0 708 aa27.92■■■□□ 2.06
HOXC6-204ENST00000509328 QTRT2Q9H974 415 aaKnown RBP27.91■■■□□ 2.06
HOXC6-204ENST00000509328 NRAPQ86VF7 1730 aa27.9■■■□□ 2.06
HOXC6-204ENST00000509328 UNC5CLQ8IV45 518 aa27.9■■■□□ 2.06
HOXC6-204ENST00000509328 TRPC5Q9UL62 973 aaPredicted RBP27.9■■■□□ 2.06
HOXC6-204ENST00000509328 ILDR2Q71H61 639 aa27.89■■■□□ 2.06
HOXC6-204ENST00000509328 CARD14Q9BXL6 1004 aa27.89■■■□□ 2.06
HOXC6-204ENST00000509328 OVOS2A0A0J9YW53 1432 aa27.88■■■□□ 2.05
HOXC6-204ENST00000509328 ATRNO75882 1429 aa27.88■■■□□ 2.05
HOXC6-204ENST00000509328 OVOS2Q6IE36 1432 aa27.88■■■□□ 2.05
HOXC6-204ENST00000509328 NSD3Q9BZ95 1437 aa27.88■■■□□ 2.05
HOXC6-204ENST00000509328 NFAT5O94916 1531 aa27.87■■■□□ 2.05
HOXC6-204ENST00000509328 CHRNA2Q15822 529 aa27.86■■■□□ 2.05
HOXC6-204ENST00000509328 BTG4Q9NY30 223 aa27.86■■■□□ 2.05
HOXC6-204ENST00000509328 LMO7Q8WWI1 1683 aa27.86■■■□□ 2.05
HOXC6-204ENST00000509328 RXRBP28702 533 aa27.85■■■□□ 2.05
HOXC6-204ENST00000509328 FYB1O15117 783 aa27.84■■■□□ 2.05
HOXC6-204ENST00000509328 COG3Q96JB2 828 aa27.84■■■□□ 2.05
HOXC6-204ENST00000509328 PANK3Q9H999 370 aa27.84■■■□□ 2.05
HOXC6-204ENST00000509328 CCDC7Q96M83 1385 aa27.84■■■□□ 2.05
HOXC6-204ENST00000509328 SOX12O15370 315 aa27.83■■■□□ 2.05
HOXC6-204ENST00000509328 RBM6P78332 1123 aaKnown RBP27.83■■■□□ 2.05
HOXC6-204ENST00000509328 LTN1O94822 1766 aa27.83■■■□□ 2.05
HOXC6-204ENST00000509328 COL18A1P39060 1754 aa27.83■■■□□ 2.05
HOXC6-204ENST00000509328 ARHGEF25Q86VW2 580 aa27.81■■■□□ 2.04
HOXC6-204ENST00000509328 WASHC2AQ641Q2 1341 aa27.81■■■□□ 2.04
HOXC6-204ENST00000509328 AATKQ6ZMQ8 1374 aa27.81■■■□□ 2.04
HOXC6-204ENST00000509328 CAMTA1Q9Y6Y1 1673 aa27.81■■■□□ 2.04
HOXC6-204ENST00000509328 ZBTB7CA1YPR0 619 aa27.8■■■□□ 2.04
HOXC6-204ENST00000509328 VPS72Q15906 364 aa27.8■■■□□ 2.04
HOXC6-204ENST00000509328 GGNBP2Q9H3C7 697 aa27.8■■■□□ 2.04
HOXC6-204ENST00000509328 CGNL1Q0VF96 1302 aa27.8■■■□□ 2.04
HOXC6-204ENST00000509328 RGPD5Q99666 1765 aa27.78■■■□□ 2.04
HOXC6-204ENST00000509328 CDK12Q9NYV4 1490 aaPredicted RBP27.78■■■□□ 2.04
HOXC6-204ENST00000509328 GJD4Q96KN9 370 aaPredicted RBP27.78■■■□□ 2.04
HOXC6-204ENST00000509328 ANKRD26Q9UPS8 1709 aa27.78■■■□□ 2.04
HOXC6-204ENST00000509328 ABCC6O95255 1503 aa27.77■■■□□ 2.04
HOXC6-204ENST00000509328 GLI3P10071 1580 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms