RNA–Protein interactions for RNA: ENST00000509176.5

CCSER1-209, Transcript of coiled-coil serine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCSER1, Length 5,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-209ENST00000509176 SMC3Q9UQE7 1217 aa13.29□□□□□ -0.28
CCSER1-209ENST00000509176 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
CCSER1-209ENST00000509176 BCL11BQ9C0K0 894 aaPredicted RBP13.29□□□□□ -0.28
CCSER1-209ENST00000509176 SLC52A1Q9NWF4 448 aa13.29□□□□□ -0.28
CCSER1-209ENST00000509176 KRT18P05783 430 aaKnown RBP13.28□□□□□ -0.28
CCSER1-209ENST00000509176 UBAP1LF5GYI3 381 aa13.28□□□□□ -0.28
CCSER1-209ENST00000509176 PTCD1O75127 700 aaKnown RBP13.28□□□□□ -0.28
CCSER1-209ENST00000509176 OFD1O75665 1012 aa13.28□□□□□ -0.28
CCSER1-209ENST00000509176 FYCO1Q9BQS8 1478 aa13.28□□□□□ -0.28
CCSER1-209ENST00000509176 RRBP1Q9P2E9 1410 aaKnown RBP13.28□□□□□ -0.28
CCSER1-209ENST00000509176 DDX49Q9Y6V7 483 aaKnown RBP13.28□□□□□ -0.28
CCSER1-209ENST00000509176 RTEL1-TNFRSF6BF6WH68 1400 aa13.27□□□□□ -0.28
CCSER1-209ENST00000509176 GNAI3P08754 354 aa13.27□□□□□ -0.28
CCSER1-209ENST00000509176 CCDC70Q6NSX1 233 aa13.27□□□□□ -0.28
CCSER1-209ENST00000509176 CNTROBQ8N137 903 aa13.27□□□□□ -0.28
CCSER1-209ENST00000509176 SPINK5Q9NQ38 1064 aaPredicted RBP13.27□□□□□ -0.29
CCSER1-209ENST00000509176 GRM1Q13255 1194 aa13.27□□□□□ -0.29
CCSER1-209ENST00000509176 INTS3Q68E01 1043 aaKnown RBP13.27□□□□□ -0.29
CCSER1-209ENST00000509176 PRKRIP1Q9H875 184 aaPredicted RBP13.27□□□□□ -0.29
CCSER1-209ENST00000509176 STARD3NLO95772 234 aa13.26□□□□□ -0.29
CCSER1-209ENST00000509176 EXOC6Q8TAG9 804 aa13.26□□□□□ -0.29
CCSER1-209ENST00000509176 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCSER1-209ENST00000509176 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
CCSER1-209ENST00000509176 TMOD3Q9NYL9 352 aa13.26□□□□□ -0.29
CCSER1-209ENST00000509176 CEBPAP49715 358 aaPredicted RBP13.26□□□□□ -0.29
CCSER1-209ENST00000509176 NINLQ9Y2I6 1382 aa13.26□□□□□ -0.29
CCSER1-209ENST00000509176 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
CCSER1-209ENST00000509176 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
CCSER1-209ENST00000509176 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
CCSER1-209ENST00000509176 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
CCSER1-209ENST00000509176 RAI14Q9P0K7 980 aa13.25□□□□□ -0.29
CCSER1-209ENST00000509176 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
CCSER1-209ENST00000509176 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
CCSER1-209ENST00000509176 SLC12A5Q9H2X9 1139 aa13.24□□□□□ -0.29
CCSER1-209ENST00000509176 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
CCSER1-209ENST00000509176 MPRIPQ6WCQ1 1025 aa13.24□□□□□ -0.29
CCSER1-209ENST00000509176 ZNF652Q9Y2D9 606 aa13.24□□□□□ -0.29
CCSER1-209ENST00000509176 RRP1P56182 461 aaKnown RBP13.24□□□□□ -0.29
CCSER1-209ENST00000509176 FKBP4Q02790 459 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCSER1-209ENST00000509176 NESP48681 1621 aa13.23□□□□□ -0.29
CCSER1-209ENST00000509176 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
CCSER1-209ENST00000509176 CCDC73Q6ZRK6 1079 aa13.23□□□□□ -0.29
CCSER1-209ENST00000509176 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
CCSER1-209ENST00000509176 FOXO3O43524 673 aa13.23□□□□□ -0.29
CCSER1-209ENST00000509176 RBM19Q9Y4C8 960 aaKnown RBP13.23□□□□□ -0.29
CCSER1-209ENST00000509176 ANKIB1Q9P2G1 1089 aa13.23□□□□□ -0.29
CCSER1-209ENST00000509176 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
CCSER1-209ENST00000509176 PSMA5P28066 241 aa13.22□□□□□ -0.29
CCSER1-209ENST00000509176 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
CCSER1-209ENST00000509176 TCP11L2Q8N4U5 519 aa13.22□□□□□ -0.29
CCSER1-209ENST00000509176 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
CCSER1-209ENST00000509176 SOGA3Q5TF21 947 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 ERC1Q8IUD2 1116 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 DDX11L8A8MPP1 907 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 KCNH5Q8NCM2 988 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 PANK1Q8TE04 598 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 ABCF2Q9UG63 623 aa13.21□□□□□ -0.29
CCSER1-209ENST00000509176 ZNF592Q92610 1267 aa13.21□□□□□ -0.3
CCSER1-209ENST00000509176 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.3
CCSER1-209ENST00000509176 EXOC5O00471 708 aa13.2□□□□□ -0.3
CCSER1-209ENST00000509176 TOM1O60784 492 aa13.2□□□□□ -0.3
CCSER1-209ENST00000509176 CRACR2BQ8N4Y2 399 aaPredicted RBP13.2□□□□□ -0.3
CCSER1-209ENST00000509176 TMEM87AQ8NBN3 555 aa13.2□□□□□ -0.3
CCSER1-209ENST00000509176 RPGRQ92834 1020 aaKnown RBP13.2□□□□□ -0.3
CCSER1-209ENST00000509176 PATL2C9JE40 543 aaKnown RBP13.2□□□□□ -0.3
CCSER1-209ENST00000509176 AK7Q96M32 723 aa13.2□□□□□ -0.3
CCSER1-209ENST00000509176 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
CCSER1-209ENST00000509176 FGD6Q6ZV73 1430 aa13.2□□□□□ -0.3
CCSER1-209ENST00000509176 ZNF76P36508 570 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 IFT140Q96RY7 1462 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 GNAI2P04899 355 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 PDCL3Q9H2J4 239 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 TXLNAP40222 546 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 SRCIN1Q9C0H9 1055 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 C1orf115Q9H7X2 142 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 USP5P45974 858 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 TDO2P48775 406 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 CEP126Q9P2H0 1117 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 SYCP1Q15431 976 aa13.19□□□□□ -0.3
CCSER1-209ENST00000509176 NUDT16Q96DE0 195 aaKnown RBP13.19□□□□□ -0.3
CCSER1-209ENST00000509176 EXOSC9Q06265 439 aaKnown RBP13.18□□□□□ -0.3
CCSER1-209ENST00000509176 CUX1P39880 1505 aa13.18□□□□□ -0.3
CCSER1-209ENST00000509176 OLFM4Q6UX06 510 aa13.18□□□□□ -0.3
CCSER1-209ENST00000509176 HOMER1Q86YM7 354 aa13.18□□□□□ -0.3
CCSER1-209ENST00000509176 PIBF1Q8WXW3 757 aa13.18□□□□□ -0.3
CCSER1-209ENST00000509176 ZNF622Q969S3 477 aaKnown RBP eCLIP13.18□□□□□ -0.3
CCSER1-209ENST00000509176 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
CCSER1-209ENST00000509176 SNAPC4Q5SXM2 1469 aa13.18□□□□□ -0.3
CCSER1-209ENST00000509176 CCDC69A6NI79 296 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 PPM1FP49593 454 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-209ENST00000509176 CNTLNQ9NXG0 1405 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 WAPLQ7Z5K2 1190 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 CLEC11AQ9Y240 323 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 NBPF1Q3BBV0 1214 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
CCSER1-209ENST00000509176 SDF4Q9BRK5 362 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 HIP1O00291 1037 aa13.17□□□□□ -0.3
CCSER1-209ENST00000509176 ZSCAN25Q6NSZ9 544 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms