RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 MYSM1Q5VVJ2 828 aa11.45□□□□□ -0.58
LINC01088-205ENST00000509088 ZBTB3Q9H5J0 574 aa11.45□□□□□ -0.58
LINC01088-205ENST00000509088 SLC24A3Q9HC58 644 aa11.45□□□□□ -0.58
LINC01088-205ENST00000509088 MAP10Q9P2G4 905 aa11.45□□□□□ -0.58
LINC01088-205ENST00000509088 PRPF38BQ5VTL8 546 aaKnown RBP11.44□□□□□ -0.58
LINC01088-205ENST00000509088 TRIM46Q7Z4K8 759 aa11.44□□□□□ -0.58
LINC01088-205ENST00000509088 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
LINC01088-205ENST00000509088 SLC24A1O60721 1099 aa11.43□□□□□ -0.58
LINC01088-205ENST00000509088 QPCTQ16769 361 aa11.43□□□□□ -0.58
LINC01088-205ENST00000509088 WFS1O76024 890 aa11.42□□□□□ -0.58
LINC01088-205ENST00000509088 BMP1P13497 986 aa11.42□□□□□ -0.58
LINC01088-205ENST00000509088 CSPP1Q1MSJ5 1256 aa11.42□□□□□ -0.58
LINC01088-205ENST00000509088 SENP2Q9HC62 589 aa11.42□□□□□ -0.58
LINC01088-205ENST00000509088 MPNDQ8N594 471 aa11.41□□□□□ -0.58
LINC01088-205ENST00000509088 WASF2Q9Y6W5 498 aa11.41□□□□□ -0.58
LINC01088-205ENST00000509088 VARSP26640 1264 aaKnown RBP11.4□□□□□ -0.58
LINC01088-205ENST00000509088 TUSC1Q2TAM9 212 aa11.4□□□□□ -0.58
LINC01088-205ENST00000509088 CAPN5O15484 640 aaPredicted RBP11.39□□□□□ -0.59
LINC01088-205ENST00000509088 LILRB3O75022 631 aa11.39□□□□□ -0.59
LINC01088-205ENST00000509088 CTHP32929 405 aa11.39□□□□□ -0.59
LINC01088-205ENST00000509088 FOXJ1Q92949 421 aa11.39□□□□□ -0.59
LINC01088-205ENST00000509088 C4orf48Q5BLP8 95 aa11.38□□□□□ -0.59
LINC01088-205ENST00000509088 KIFC2Q96AC6 838 aa11.38□□□□□ -0.59
LINC01088-205ENST00000509088 TERTO14746 1132 aaKnown RBP11.36□□□□□ -0.59
LINC01088-205ENST00000509088 NNTQ13423 1086 aa11.36□□□□□ -0.59
LINC01088-205ENST00000509088 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
LINC01088-205ENST00000509088 KLF16Q9BXK1 252 aaPredicted RBP11.35□□□□□ -0.59
LINC01088-205ENST00000509088 WIPF1O43516 503 aa11.34□□□□□ -0.59
LINC01088-205ENST00000509088 TIMP2P16035 220 aa11.34□□□□□ -0.59
LINC01088-205ENST00000509088 CDK15Q96Q40 435 aa11.34□□□□□ -0.59
LINC01088-205ENST00000509088 PLEKHG3A1L390 1219 aa11.32□□□□□ -0.6
LINC01088-205ENST00000509088 ADH1CP00326 375 aa11.32□□□□□ -0.6
LINC01088-205ENST00000509088 CLK2P49760 499 aaKnown RBP11.31□□□□□ -0.6
LINC01088-205ENST00000509088 FBXO31Q5XUX0 539 aaPredicted RBP11.31□□□□□ -0.6
LINC01088-205ENST00000509088 FAM174AQ8TBP5 190 aa11.31□□□□□ -0.6
LINC01088-205ENST00000509088 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
LINC01088-205ENST00000509088 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
LINC01088-205ENST00000509088 NR3C2P08235 984 aa11.29□□□□□ -0.6
LINC01088-205ENST00000509088 NUTM2DQ5VT03 806 aaPredicted RBP11.29□□□□□ -0.6
LINC01088-205ENST00000509088 SH3RF1Q7Z6J0 888 aa11.29□□□□□ -0.6
LINC01088-205ENST00000509088 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
LINC01088-205ENST00000509088 TSC1Q92574 1164 aa11.29□□□□□ -0.6
LINC01088-205ENST00000509088 ZFP42Q96MM3 310 aa11.29□□□□□ -0.6
LINC01088-205ENST00000509088 GRM5P41594 1212 aa11.28□□□□□ -0.6
LINC01088-205ENST00000509088 C1QTNF2Q9BXJ5 285 aa11.28□□□□□ -0.6
LINC01088-205ENST00000509088 WDR4P57081 412 aaKnown RBP11.27□□□□□ -0.61
LINC01088-205ENST00000509088 POLR3EQ9NVU0 708 aa11.27□□□□□ -0.61
LINC01088-205ENST00000509088 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
LINC01088-205ENST00000509088 SH3BP5LQ7L8J4 393 aa11.26□□□□□ -0.61
LINC01088-205ENST00000509088 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
LINC01088-205ENST00000509088 NXF1Q9UBU9 619 aaKnown RBP11.25□□□□□ -0.61
LINC01088-205ENST00000509088 ARID5BQ14865 1188 aa11.24□□□□□ -0.61
LINC01088-205ENST00000509088 BPHLQ86WA6 291 aaPredicted RBP11.24□□□□□ -0.61
LINC01088-205ENST00000509088 ITPKCQ96DU7 683 aa11.24□□□□□ -0.61
LINC01088-205ENST00000509088 HELBQ8NG08 1087 aaPredicted RBP11.23□□□□□ -0.61
LINC01088-205ENST00000509088 PURBQ96QR8 312 aaKnown RBP11.23□□□□□ -0.61
LINC01088-205ENST00000509088 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
LINC01088-205ENST00000509088 CTDSPL2Q05D32 466 aa11.22□□□□□ -0.61
LINC01088-205ENST00000509088 RSPH6AQ9H0K4 717 aa11.22□□□□□ -0.61
LINC01088-205ENST00000509088 ZIC2O95409 532 aaPredicted RBP11.21□□□□□ -0.61
LINC01088-205ENST00000509088 VEGFBP49765 207 aa11.21□□□□□ -0.61
LINC01088-205ENST00000509088 NR5A1Q13285 461 aa11.21□□□□□ -0.61
LINC01088-205ENST00000509088 AGERQ15109 404 aa11.21□□□□□ -0.61
LINC01088-205ENST00000509088 TRMT44Q8IYL2 757 aaKnown RBP11.21□□□□□ -0.61
LINC01088-205ENST00000509088 ARMC2Q8NEN0 867 aa11.2□□□□□ -0.62
LINC01088-205ENST00000509088 SOBPA7XYQ1 873 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 H3BM21 787 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 LORP23490 312 aaPredicted RBP11.19□□□□□ -0.62
LINC01088-205ENST00000509088 NBPF14Q5TI25 921 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 NPAS3Q8IXF0 933 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC01088-205ENST00000509088 FAM117AQ9C073 453 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 KDM4CQ9H3R0 1056 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 MAP4K5Q9Y4K4 846 aa11.19□□□□□ -0.62
LINC01088-205ENST00000509088 ERBB4Q15303 1308 aa11.18□□□□□ -0.62
LINC01088-205ENST00000509088 PROCA1Q8NCQ7 364 aaPredicted RBP11.18□□□□□ -0.62
LINC01088-205ENST00000509088 LRRN4Q8WUT4 740 aa11.18□□□□□ -0.62
LINC01088-205ENST00000509088 FSHRP23945 695 aa11.17□□□□□ -0.62
LINC01088-205ENST00000509088 GMPRP36959 345 aa11.17□□□□□ -0.62
LINC01088-205ENST00000509088 SH3D19Q5HYK7 790 aa11.17□□□□□ -0.62
LINC01088-205ENST00000509088 INSM1Q01101 510 aaPredicted RBP11.16□□□□□ -0.62
LINC01088-205ENST00000509088 SCARF1Q14162 830 aa11.16□□□□□ -0.62
LINC01088-205ENST00000509088 SKIV2LQ15477 1246 aaKnown RBP11.16□□□□□ -0.62
LINC01088-205ENST00000509088 ERFEQ4G0M1 354 aa11.16□□□□□ -0.62
LINC01088-205ENST00000509088 MEIOBQ8N635 442 aa11.16□□□□□ -0.62
LINC01088-205ENST00000509088 STK17AQ9UEE5 414 aa11.16□□□□□ -0.62
LINC01088-205ENST00000509088 MAGEB6P1A0A0J9YX57 407 aa11.15□□□□□ -0.62
LINC01088-205ENST00000509088 PPP2R2DQ66LE6 453 aa11.15□□□□□ -0.62
LINC01088-205ENST00000509088 SLC16A10Q8TF71 515 aa11.15□□□□□ -0.62
LINC01088-205ENST00000509088 GPKOWQ92917 476 aaPredicted RBP eCLIP11.14□□□□□ -0.63
LINC01088-205ENST00000509088 OCSTAMPQ9BR26 566 aa11.14□□□□□ -0.63
LINC01088-205ENST00000509088 CARD14Q9BXL6 1004 aa11.14□□□□□ -0.63
LINC01088-205ENST00000509088 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
LINC01088-205ENST00000509088 C6orf118Q5T5N4 469 aa11.12□□□□□ -0.63
LINC01088-205ENST00000509088 NR6A1Q15406 480 aa11.11□□□□□ -0.63
LINC01088-205ENST00000509088 LINC00528Q8N1L1 170 aa11.11□□□□□ -0.63
LINC01088-205ENST00000509088 IRF7Q92985 503 aa11.11□□□□□ -0.63
LINC01088-205ENST00000509088 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
LINC01088-205ENST00000509088 PDXDC2PQ6P474 469 aa11.1□□□□□ -0.63
LINC01088-205ENST00000509088 DDRGK1Q96HY6 314 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms