RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 RGPD8O14715 1765 aaPredicted RBP14.18□□□□□ -0.14
RFC1-211ENST00000509084 POLR3AO14802 1390 aaPredicted RBP14.18□□□□□ -0.14
RFC1-211ENST00000509084 BRD4O60885 1362 aaPredicted RBP14.18□□□□□ -0.14
RFC1-211ENST00000509084 C1orf167Q5SNV9 1468 aa14.18□□□□□ -0.14
RFC1-211ENST00000509084 CGNL1Q0VF96 1302 aa14.17□□□□□ -0.14
RFC1-211ENST00000509084 NUTM2FA1L443 756 aa14.17□□□□□ -0.14
RFC1-211ENST00000509084 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
RFC1-211ENST00000509084 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
RFC1-211ENST00000509084 ACEP12821 1306 aa14.15□□□□□ -0.14
RFC1-211ENST00000509084 USP6P35125 1406 aa14.15□□□□□ -0.14
RFC1-211ENST00000509084 IQSEC2Q5JU85 1478 aa14.15□□□□□ -0.14
RFC1-211ENST00000509084 RALBP1Q15311 655 aa14.15□□□□□ -0.14
RFC1-211ENST00000509084 CARD14Q9BXL6 1004 aa14.15□□□□□ -0.14
RFC1-211ENST00000509084 KIF20BQ96Q89 1820 aa14.14□□□□□ -0.15
RFC1-211ENST00000509084 DSG3P32926 999 aa14.14□□□□□ -0.15
RFC1-211ENST00000509084 AMER1Q5JTC6 1135 aaPredicted RBP14.14□□□□□ -0.15
RFC1-211ENST00000509084 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
RFC1-211ENST00000509084 PRKRIP1Q9H875 184 aaPredicted RBP14.14□□□□□ -0.15
RFC1-211ENST00000509084 ANKRD26Q9UPS8 1709 aa14.13□□□□□ -0.15
RFC1-211ENST00000509084 PARD3Q8TEW0 1356 aa14.13□□□□□ -0.15
RFC1-211ENST00000509084 ESCO1Q5FWF5 840 aa14.13□□□□□ -0.15
RFC1-211ENST00000509084 PMFBP1Q8TBY8 1022 aa14.12□□□□□ -0.15
RFC1-211ENST00000509084 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
RFC1-211ENST00000509084 MIER1Q8N108 512 aa14.11□□□□□ -0.15
RFC1-211ENST00000509084 SSH2Q76I76 1423 aa14.1□□□□□ -0.15
RFC1-211ENST00000509084 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
RFC1-211ENST00000509084 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
RFC1-211ENST00000509084 FBXO41Q8TF61 875 aa14.09□□□□□ -0.15
RFC1-211ENST00000509084 NPHP3Q7Z494 1330 aa14.09□□□□□ -0.15
RFC1-211ENST00000509084 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
RFC1-211ENST00000509084 MYBBP1AQ9BQG0 1328 aaKnown RBP14.09□□□□□ -0.15
RFC1-211ENST00000509084 ORAI2Q96SN7 254 aa14.08□□□□□ -0.16
RFC1-211ENST00000509084 SLAIN2Q9P270 581 aa14.08□□□□□ -0.16
RFC1-211ENST00000509084 PSME1Q06323 249 aa14.07□□□□□ -0.16
RFC1-211ENST00000509084 USP54Q70EL1 1684 aa14.07□□□□□ -0.16
RFC1-211ENST00000509084 FYB1O15117 783 aa14.06□□□□□ -0.16
RFC1-211ENST00000509084 MORC1Q86VD1 984 aa14.06□□□□□ -0.16
RFC1-211ENST00000509084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.06□□□□□ -0.16
RFC1-211ENST00000509084 USP31Q70CQ4 1352 aa14.06□□□□□ -0.16
RFC1-211ENST00000509084 TRPM3Q9HCF6 1732 aaPredicted RBP14.05□□□□□ -0.16
RFC1-211ENST00000509084 BRINP3Q76B58 766 aa14.05□□□□□ -0.16
RFC1-211ENST00000509084 NLRP13Q86W25 1043 aa14.05□□□□□ -0.16
RFC1-211ENST00000509084 COG3Q96JB2 828 aa14.05□□□□□ -0.16
RFC1-211ENST00000509084 OVOS2A0A0J9YW53 1432 aa14.05□□□□□ -0.16
RFC1-211ENST00000509084 OVOS2Q6IE36 1432 aa14.05□□□□□ -0.16
RFC1-211ENST00000509084 NHSL1Q5SYE7 1610 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 PIK3C2AO00443 1686 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 FOXO3O43524 673 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 TOM1O60784 492 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 ABCB7O75027 752 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 CNGB1Q14028 1251 aaPredicted RBP14.04□□□□□ -0.16
RFC1-211ENST00000509084 GGNBP2Q9H3C7 697 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 SBNO1A3KN83 1393 aa14.04□□□□□ -0.16
RFC1-211ENST00000509084 KRT28Q7Z3Y7 464 aa14.03□□□□□ -0.16
RFC1-211ENST00000509084 NME9Q86XW9 330 aa14.03□□□□□ -0.16
RFC1-211ENST00000509084 ROBO1Q9Y6N7 1651 aa14.02□□□□□ -0.16
RFC1-211ENST00000509084 PXDNQ92626 1479 aa14.02□□□□□ -0.16
RFC1-211ENST00000509084 ALS2Q96Q42 1657 aa14.01□□□□□ -0.17
RFC1-211ENST00000509084 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
RFC1-211ENST00000509084 TNS3Q68CZ2 1445 aa14.01□□□□□ -0.17
RFC1-211ENST00000509084 AATKQ6ZMQ8 1374 aa14.01□□□□□ -0.17
RFC1-211ENST00000509084 PAK3O75914 559 aaPredicted RBP14.01□□□□□ -0.17
RFC1-211ENST00000509084 PPP2R1AP30153 589 aa14.01□□□□□ -0.17
RFC1-211ENST00000509084 ARHGEF10O15013 1369 aa14□□□□□ -0.17
RFC1-211ENST00000509084 ABTB2Q8N961 1025 aa14□□□□□ -0.17
RFC1-211ENST00000509084 CERKQ8TCT0 537 aa14□□□□□ -0.17
RFC1-211ENST00000509084 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
RFC1-211ENST00000509084 NLRP6P59044 892 aa13.99□□□□□ -0.17
RFC1-211ENST00000509084 MRS2Q9HD23 443 aa13.99□□□□□ -0.17
RFC1-211ENST00000509084 MED1Q15648 1581 aaPredicted RBP13.98□□□□□ -0.17
RFC1-211ENST00000509084 ATXN8OSP0DMR3 200 aa13.98□□□□□ -0.17
RFC1-211ENST00000509084 MARF1Q9Y4F3 1742 aaKnown RBP13.98□□□□□ -0.17
RFC1-211ENST00000509084 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
RFC1-211ENST00000509084 SLIT3O75094 1523 aa13.97□□□□□ -0.17
RFC1-211ENST00000509084 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
RFC1-211ENST00000509084 SPATA31A3Q5VYP0 1347 aa13.96□□□□□ -0.17
RFC1-211ENST00000509084 UBAP1LF5GYI3 381 aa13.96□□□□□ -0.17
RFC1-211ENST00000509084 KCNH5Q8NCM2 988 aa13.96□□□□□ -0.17
RFC1-211ENST00000509084 CFAP53Q96M91 514 aa13.96□□□□□ -0.17
RFC1-211ENST00000509084 USP19O94966 1318 aa13.95□□□□□ -0.18
RFC1-211ENST00000509084 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
RFC1-211ENST00000509084 TNNT2P45379 298 aaPredicted RBP13.95□□□□□ -0.18
RFC1-211ENST00000509084 ZRANB1Q9UGI0 708 aa13.95□□□□□ -0.18
RFC1-211ENST00000509084 ATF5Q9Y2D1 282 aaPredicted RBP13.95□□□□□ -0.18
RFC1-211ENST00000509084 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
RFC1-211ENST00000509084 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
RFC1-211ENST00000509084 PHRF1Q9P1Y6 1649 aaKnown RBP13.93□□□□□ -0.18
RFC1-211ENST00000509084 PHLPP1O60346 1717 aa13.93□□□□□ -0.18
RFC1-211ENST00000509084 MTHFSP49914 203 aa13.93□□□□□ -0.18
RFC1-211ENST00000509084 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
RFC1-211ENST00000509084 NFAT5O94916 1531 aa13.93□□□□□ -0.18
RFC1-211ENST00000509084 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
RFC1-211ENST00000509084 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
RFC1-211ENST00000509084 RTL1A6NKG5 1358 aa13.92□□□□□ -0.18
RFC1-211ENST00000509084 INSRP06213 1382 aa13.92□□□□□ -0.18
RFC1-211ENST00000509084 CRYBG1Q9Y4K1 1723 aa13.92□□□□□ -0.18
RFC1-211ENST00000509084 COL16A1Q07092 1604 aaPredicted RBP13.91□□□□□ -0.18
RFC1-211ENST00000509084 NUTM2GQ5VZR2 741 aa13.91□□□□□ -0.18
RFC1-211ENST00000509084 POLKQ9UBT6 870 aa13.91□□□□□ -0.18
RFC1-211ENST00000509084 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms