RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ERICH6Q7L0X2 663 aa15.14■□□□□ 0.01
PRPF40B-203ENST00000508736 NUDT16Q96DE0 195 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-203ENST00000508736 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-203ENST00000508736 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-203ENST00000508736 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
PRPF40B-203ENST00000508736 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
PRPF40B-203ENST00000508736 KCNA6P17658 529 aa15.13■□□□□ 0.01
PRPF40B-203ENST00000508736 MON2Q7Z3U7 1717 aa15.13■□□□□ 0.01
PRPF40B-203ENST00000508736 COL3A1P02461 1466 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-203ENST00000508736 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-203ENST00000508736 XRN1Q8IZH2 1706 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-203ENST00000508736 APAF1O14727 1248 aa15.12■□□□□ 0.01
PRPF40B-203ENST00000508736 RUNDC1Q96C34 613 aa15.12■□□□□ 0.01
PRPF40B-203ENST00000508736 TOPAZ1Q8N9V7 1692 aa15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 PNPLA6Q8IY17 1366 aa15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 AKAP12Q02952 1782 aa15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 IQSEC2Q5JU85 1478 aa15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 CCDC146Q8IYE0 955 aa15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 TRMT2AQ8IZ69 625 aaKnown RBP15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 ZNF335Q9H4Z2 1342 aaPredicted RBP15.11■□□□□ 0.01
PRPF40B-203ENST00000508736 MSH5O43196 834 aa15.1■□□□□ 0.01
PRPF40B-203ENST00000508736 DUSP27Q5VZP5 1158 aa15.1■□□□□ 0.01
PRPF40B-203ENST00000508736 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.1■□□□□ 0.01
PRPF40B-203ENST00000508736 RBM33Q96EV2 1170 aaKnown RBP15.1■□□□□ 0.01
PRPF40B-203ENST00000508736 ITSN1Q15811 1721 aa15.09■□□□□ 0.01
PRPF40B-203ENST00000508736 TCERG1O14776 1098 aaKnown RBP15.09■□□□□ 0.01
PRPF40B-203ENST00000508736 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
PRPF40B-203ENST00000508736 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
PRPF40B-203ENST00000508736 PLEKHG3A1L390 1219 aa15.08■□□□□ 0.01
PRPF40B-203ENST00000508736 PROSER2Q86WR7 435 aaPredicted RBP15.08■□□□□ 0.01
PRPF40B-203ENST00000508736 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0.01
PRPF40B-203ENST00000508736 CHD2O14647 1828 aaKnown RBP15.08■□□□□ 0
PRPF40B-203ENST00000508736 AATKQ6ZMQ8 1374 aa15.08■□□□□ 0
PRPF40B-203ENST00000508736 CCDC27Q2M243 656 aa15.08■□□□□ 0
PRPF40B-203ENST00000508736 NKTRP30414 1462 aaKnown RBP15.07■□□□□ 0
PRPF40B-203ENST00000508736 E9PSI1 815 aa15.07■□□□□ 0
PRPF40B-203ENST00000508736 ANP32AP39687 249 aaKnown RBP15.06■□□□□ 0
PRPF40B-203ENST00000508736 NRKQ7Z2Y5 1582 aa15.06■□□□□ 0
PRPF40B-203ENST00000508736 CRBNQ96SW2 442 aa15.06■□□□□ 0
PRPF40B-203ENST00000508736 PLIN1O60240 522 aa15.05■□□□□ -0
PRPF40B-203ENST00000508736 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.05■□□□□ -0
PRPF40B-203ENST00000508736 WWC1Q8IX03 1113 aa15.05■□□□□ -0
PRPF40B-203ENST00000508736 MS4A1P11836 297 aa15.04■□□□□ -0
PRPF40B-203ENST00000508736 TCP11L2Q8N4U5 519 aa15.04■□□□□ -0
PRPF40B-203ENST00000508736 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
PRPF40B-203ENST00000508736 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
PRPF40B-203ENST00000508736 C14orf37Q86TY3 774 aa15.03■□□□□ -0
PRPF40B-203ENST00000508736 ANKARQ7Z5J8 1434 aa15.03■□□□□ -0
PRPF40B-203ENST00000508736 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
PRPF40B-203ENST00000508736 WDR63Q8IWG1 891 aa15.03■□□□□ -0
PRPF40B-203ENST00000508736 PNNQ9H307 717 aaKnown RBP15.03■□□□□ -0
PRPF40B-203ENST00000508736 POLKQ9UBT6 870 aa15.03■□□□□ -0
PRPF40B-203ENST00000508736 STRCP1A6NGW2 1772 aa15.02■□□□□ -0
PRPF40B-203ENST00000508736 CDK12Q9NYV4 1490 aaPredicted RBP15.02■□□□□ -0
PRPF40B-203ENST00000508736 USP6P35125 1406 aa15.02■□□□□ -0
PRPF40B-203ENST00000508736 COG3Q96JB2 828 aa15.02■□□□□ -0
PRPF40B-203ENST00000508736 NME9Q86XW9 330 aa15.01□□□□□ -0.01
PRPF40B-203ENST00000508736 NWD1Q149M9 1564 aa15.01□□□□□ -0.01
PRPF40B-203ENST00000508736 ACEP12821 1306 aa15.01□□□□□ -0.01
PRPF40B-203ENST00000508736 SSH2Q76I76 1423 aa15.01□□□□□ -0.01
PRPF40B-203ENST00000508736 PLEKHF1Q96S99 279 aa15.01□□□□□ -0.01
PRPF40B-203ENST00000508736 TMEM94Q12767 1356 aa15.01□□□□□ -0.01
PRPF40B-203ENST00000508736 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
PRPF40B-203ENST00000508736 TTC21BQ7Z4L5 1316 aa15□□□□□ -0.01
PRPF40B-203ENST00000508736 MAP2P11137 1827 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-203ENST00000508736 OVOS2A0A0J9YW53 1432 aa14.99□□□□□ -0.01
PRPF40B-203ENST00000508736 OVOS2Q6IE36 1432 aa14.99□□□□□ -0.01
PRPF40B-203ENST00000508736 FCHSD2O94868 740 aa14.99□□□□□ -0.01
PRPF40B-203ENST00000508736 NOP58Q9Y2X3 529 aaKnown RBP14.99□□□□□ -0.01
PRPF40B-203ENST00000508736 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
PRPF40B-203ENST00000508736 U2SURPO15042 1029 aaKnown RBP14.98□□□□□ -0.01
PRPF40B-203ENST00000508736 FMN2Q9NZ56 1722 aa14.98□□□□□ -0.01
PRPF40B-203ENST00000508736 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
PRPF40B-203ENST00000508736 NALCNQ8IZF0 1738 aa14.97□□□□□ -0.01
PRPF40B-203ENST00000508736 LRRC7Q96NW7 1537 aa14.97□□□□□ -0.01
PRPF40B-203ENST00000508736 C20orf194Q5TEA3 1177 aa14.97□□□□□ -0.01
PRPF40B-203ENST00000508736 MAPK8IP3Q9UPT6 1336 aa14.96□□□□□ -0.01
PRPF40B-203ENST00000508736 USP31Q70CQ4 1352 aa14.96□□□□□ -0.01
PRPF40B-203ENST00000508736 IPO9Q96P70 1041 aaKnown RBP14.96□□□□□ -0.01
PRPF40B-203ENST00000508736 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
PRPF40B-203ENST00000508736 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
PRPF40B-203ENST00000508736 TMPOP42166 694 aaKnown RBP14.95□□□□□ -0.02
PRPF40B-203ENST00000508736 RRP7AQ9Y3A4 280 aaKnown RBP14.95□□□□□ -0.02
PRPF40B-203ENST00000508736 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
PRPF40B-203ENST00000508736 LTBP4Q8N2S1 1624 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 PDE4AP27815 886 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 IL13P35225 146 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 NEUROD2Q15784 382 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 MYH16Q9H6N6 1097 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 ZRANB1Q9UGI0 708 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 EMILIN1Q9Y6C2 1016 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 IL16Q14005 1332 aa14.94□□□□□ -0.02
PRPF40B-203ENST00000508736 ATF3P18847 181 aa14.93□□□□□ -0.02
PRPF40B-203ENST00000508736 BACH2Q9BYV9 841 aa14.93□□□□□ -0.02
PRPF40B-203ENST00000508736 RSPH6AQ9H0K4 717 aa14.93□□□□□ -0.02
PRPF40B-203ENST00000508736 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
PRPF40B-203ENST00000508736 NCOA3Q9Y6Q9 1424 aa14.93□□□□□ -0.02
PRPF40B-203ENST00000508736 MSH6P52701 1360 aa14.93□□□□□ -0.02
PRPF40B-203ENST00000508736 CT47B1P0C2W7 299 aaPredicted RBP14.92□□□□□ -0.02
PRPF40B-203ENST00000508736 USP54Q70EL1 1684 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms