RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 NSD2O96028 1365 aa21.73■■□□□ 1.07
NFKB1-207ENST00000508584 PLEKHG3A1L390 1219 aa21.72■■□□□ 1.07
NFKB1-207ENST00000508584 NUTM2FA1L443 756 aa21.72■■□□□ 1.07
NFKB1-207ENST00000508584 TOPAZ1Q8N9V7 1692 aa21.72■■□□□ 1.07
NFKB1-207ENST00000508584 NALCNQ8IZF0 1738 aa21.72■■□□□ 1.07
NFKB1-207ENST00000508584 MST1RQ04912 1400 aa21.72■■□□□ 1.07
NFKB1-207ENST00000508584 LRP6O75581 1613 aa21.7■■□□□ 1.06
NFKB1-207ENST00000508584 FMN2Q9NZ56 1722 aa21.69■■□□□ 1.06
NFKB1-207ENST00000508584 PPP2R1AP30153 589 aa21.69■■□□□ 1.06
NFKB1-207ENST00000508584 ZNF772Q68DY9 489 aaPredicted RBP21.69■■□□□ 1.06
NFKB1-207ENST00000508584 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
NFKB1-207ENST00000508584 ZNF692Q9BU19 519 aaPredicted RBP21.68■■□□□ 1.06
NFKB1-207ENST00000508584 SHPRHQ149N8 1683 aa21.68■■□□□ 1.06
NFKB1-207ENST00000508584 EDC4Q6P2E9 1401 aaKnown RBP21.67■■□□□ 1.06
NFKB1-207ENST00000508584 ACEP12821 1306 aa21.66■■□□□ 1.06
NFKB1-207ENST00000508584 NUTM2BA6NNL0 878 aaPredicted RBP21.66■■□□□ 1.06
NFKB1-207ENST00000508584 NUTM2EB1AL46 878 aaPredicted RBP21.66■■□□□ 1.06
NFKB1-207ENST00000508584 NUTM2AQ8IVF1 878 aaPredicted RBP21.66■■□□□ 1.06
NFKB1-207ENST00000508584 LRRC59Q96AG4 307 aaKnown RBP21.66■■□□□ 1.06
NFKB1-207ENST00000508584 ITSN1Q15811 1721 aa21.65■■□□□ 1.06
NFKB1-207ENST00000508584 FYB1O15117 783 aa21.64■■□□□ 1.05
NFKB1-207ENST00000508584 POLR3AO14802 1390 aaPredicted RBP21.62■■□□□ 1.05
NFKB1-207ENST00000508584 AKAP12Q02952 1782 aa21.62■■□□□ 1.05
NFKB1-207ENST00000508584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.62■■□□□ 1.05
NFKB1-207ENST00000508584 FAM9BQ8IZU0 186 aa21.62■■□□□ 1.05
NFKB1-207ENST00000508584 PMFBP1Q8TBY8 1022 aa21.62■■□□□ 1.05
NFKB1-207ENST00000508584 GGNBP2Q9H3C7 697 aa21.62■■□□□ 1.05
NFKB1-207ENST00000508584 MON2Q7Z3U7 1717 aa21.62■■□□□ 1.05
NFKB1-207ENST00000508584 NGDNQ8NEJ9 315 aaKnown RBP21.61■■□□□ 1.05
NFKB1-207ENST00000508584 PNISRQ8TF01 805 aaKnown RBP21.61■■□□□ 1.05
NFKB1-207ENST00000508584 NHSL1Q5SYE7 1610 aa21.61■■□□□ 1.05
NFKB1-207ENST00000508584 USP6P35125 1406 aa21.61■■□□□ 1.05
NFKB1-207ENST00000508584 C1orf167Q5SNV9 1468 aa21.6■■□□□ 1.05
NFKB1-207ENST00000508584 DDX17Q92841 729 aaKnown RBP21.6■■□□□ 1.05
NFKB1-207ENST00000508584 TNNT2P45379 298 aaPredicted RBP21.58■■□□□ 1.05
NFKB1-207ENST00000508584 PHF8Q9UPP1 1060 aa21.58■■□□□ 1.05
NFKB1-207ENST00000508584 TTC21BQ7Z4L5 1316 aa21.57■■□□□ 1.04
NFKB1-207ENST00000508584 KIF20BQ96Q89 1820 aa21.57■■□□□ 1.04
NFKB1-207ENST00000508584 CENPBP07199 599 aaPredicted RBP21.57■■□□□ 1.04
NFKB1-207ENST00000508584 RXRBP28702 533 aa21.57■■□□□ 1.04
NFKB1-207ENST00000508584 NME9Q86XW9 330 aa21.57■■□□□ 1.04
NFKB1-207ENST00000508584 NRKQ7Z2Y5 1582 aa21.57■■□□□ 1.04
NFKB1-207ENST00000508584 SSH2Q76I76 1423 aa21.56■■□□□ 1.04
NFKB1-207ENST00000508584 ANKRD26Q9UPS8 1709 aa21.56■■□□□ 1.04
NFKB1-207ENST00000508584 PNPLA6Q8IY17 1366 aa21.56■■□□□ 1.04
NFKB1-207ENST00000508584 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
NFKB1-207ENST00000508584 AFF2P51816 1311 aa21.55■■□□□ 1.04
NFKB1-207ENST00000508584 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
NFKB1-207ENST00000508584 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
NFKB1-207ENST00000508584 TTC21AQ8NDW8 1320 aa21.54■■□□□ 1.04
NFKB1-207ENST00000508584 C8orf37Q96NL8 207 aa21.53■■□□□ 1.04
NFKB1-207ENST00000508584 COG3Q96JB2 828 aa21.52■■□□□ 1.04
NFKB1-207ENST00000508584 ZRANB1Q9UGI0 708 aa21.51■■□□□ 1.03
NFKB1-207ENST00000508584 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
NFKB1-207ENST00000508584 MTHFSP49914 203 aa21.49■■□□□ 1.03
NFKB1-207ENST00000508584 HNRNPUQ00839 825 aaKnown RBP eCLIP21.49■■□□□ 1.03
NFKB1-207ENST00000508584 CFAP53Q96M91 514 aa21.49■■□□□ 1.03
NFKB1-207ENST00000508584 CDK12Q9NYV4 1490 aaPredicted RBP21.48■■□□□ 1.03
NFKB1-207ENST00000508584 ADAMTS2O95450 1211 aa21.47■■□□□ 1.03
NFKB1-207ENST00000508584 WDR43Q15061 677 aaKnown RBP eCLIP21.47■■□□□ 1.03
NFKB1-207ENST00000508584 NGLY1Q96IV0 654 aa21.47■■□□□ 1.03
NFKB1-207ENST00000508584 QTRT2Q9H974 415 aaKnown RBP21.47■■□□□ 1.03
NFKB1-207ENST00000508584 INSRP06213 1382 aa21.47■■□□□ 1.03
NFKB1-207ENST00000508584 OVOS2A0A0J9YW53 1432 aa21.46■■□□□ 1.03
NFKB1-207ENST00000508584 OVOS2Q6IE36 1432 aa21.46■■□□□ 1.03
NFKB1-207ENST00000508584 PSME1Q06323 249 aa21.46■■□□□ 1.03
NFKB1-207ENST00000508584 UPF1Q92900 1129 aaKnown RBP eCLIP21.46■■□□□ 1.03
NFKB1-207ENST00000508584 NPHP3Q7Z494 1330 aa21.46■■□□□ 1.03
NFKB1-207ENST00000508584 KIF1AQ12756 1690 aa21.46■■□□□ 1.03
NFKB1-207ENST00000508584 USP31Q70CQ4 1352 aa21.46■■□□□ 1.03
NFKB1-207ENST00000508584 RBM6P78332 1123 aaKnown RBP21.45■■□□□ 1.02
NFKB1-207ENST00000508584 AATKQ6ZMQ8 1374 aa21.45■■□□□ 1.02
NFKB1-207ENST00000508584 PAK3O75914 559 aaPredicted RBP21.43■■□□□ 1.02
NFKB1-207ENST00000508584 FOXO3O43524 673 aa21.42■■□□□ 1.02
NFKB1-207ENST00000508584 POLKQ9UBT6 870 aa21.41■■□□□ 1.02
NFKB1-207ENST00000508584 ADAMTS8Q9UP79 889 aa21.41■■□□□ 1.02
NFKB1-207ENST00000508584 PIK3C2AO00443 1686 aa21.4■■□□□ 1.02
NFKB1-207ENST00000508584 BLMP54132 1417 aaPredicted RBP21.4■■□□□ 1.02
NFKB1-207ENST00000508584 SMG6Q86US8 1419 aaKnown RBP21.4■■□□□ 1.02
NFKB1-207ENST00000508584 FBLN1P23142 703 aa21.39■■□□□ 1.01
NFKB1-207ENST00000508584 NLRP6P59044 892 aa21.39■■□□□ 1.01
NFKB1-207ENST00000508584 KRT28Q7Z3Y7 464 aa21.39■■□□□ 1.01
NFKB1-207ENST00000508584 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
NFKB1-207ENST00000508584 USP21Q9UK80 565 aa21.39■■□□□ 1.01
NFKB1-207ENST00000508584 COL3A1P02461 1466 aaPredicted RBP21.39■■□□□ 1.01
NFKB1-207ENST00000508584 RGS12O14924 1447 aa21.38■■□□□ 1.01
NFKB1-207ENST00000508584 ZBED9Q6R2W3 1325 aa21.37■■□□□ 1.01
NFKB1-207ENST00000508584 XPCQ01831 940 aaPredicted RBP21.37■■□□□ 1.01
NFKB1-207ENST00000508584 EMILIN1Q9Y6C2 1016 aa21.37■■□□□ 1.01
NFKB1-207ENST00000508584 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
NFKB1-207ENST00000508584 FNBP4Q8N3X1 1017 aaPredicted RBP21.36■■□□□ 1.01
NFKB1-207ENST00000508584 TRPC5Q9UL62 973 aaPredicted RBP21.36■■□□□ 1.01
NFKB1-207ENST00000508584 PXDNQ92626 1479 aa21.36■■□□□ 1.01
NFKB1-207ENST00000508584 USP54Q70EL1 1684 aa21.36■■□□□ 1.01
NFKB1-207ENST00000508584 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
NFKB1-207ENST00000508584 RRS1Q15050 365 aaKnown RBP21.35■■□□□ 1.01
NFKB1-207ENST00000508584 NUTM2GQ5VZR2 741 aa21.35■■□□□ 1.01
NFKB1-207ENST00000508584 NUDCQ9Y266 331 aa21.35■■□□□ 1.01
NFKB1-207ENST00000508584 DIAPH1O60610 1272 aaKnown RBP21.33■■□□□ 1.01
NFKB1-207ENST00000508584 SOX12O15370 315 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms