RNA–Protein interactions for RNA: ENST00000508476.5

UBE2D3-225, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-225ENST00000508476 TOR4AQ9NXH8 423 aa10.94□□□□□ -0.66
UBE2D3-225ENST00000508476 FAM187AA6NFU0 413 aa10.93□□□□□ -0.66
UBE2D3-225ENST00000508476 WNT7BP56706 349 aa10.93□□□□□ -0.66
UBE2D3-225ENST00000508476 SH3BP2P78314 561 aa10.93□□□□□ -0.66
UBE2D3-225ENST00000508476 HELBQ8NG08 1087 aaPredicted RBP10.93□□□□□ -0.66
UBE2D3-225ENST00000508476 PPP2R2DQ66LE6 453 aa10.91□□□□□ -0.66
UBE2D3-225ENST00000508476 TRAF7Q6Q0C0 670 aa10.91□□□□□ -0.66
UBE2D3-225ENST00000508476 CYP4X1Q8N118 509 aa10.91□□□□□ -0.66
UBE2D3-225ENST00000508476 PKDCCQ504Y2 493 aa10.9□□□□□ -0.66
UBE2D3-225ENST00000508476 LRRN4Q8WUT4 740 aa10.9□□□□□ -0.66
UBE2D3-225ENST00000508476 ZNF511Q8NB15 262 aa10.89□□□□□ -0.67
UBE2D3-225ENST00000508476 GOPCQ9HD26 462 aa10.89□□□□□ -0.67
UBE2D3-225ENST00000508476 TTC24A2A3L6 582 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-225ENST00000508476 J3QL48 77 aa10.88□□□□□ -0.67
UBE2D3-225ENST00000508476 DGAT1O75907 488 aa10.88□□□□□ -0.67
UBE2D3-225ENST00000508476 PCMTD1Q96MG8 357 aaPredicted RBP10.88□□□□□ -0.67
UBE2D3-225ENST00000508476 AP1G2O75843 785 aa10.87□□□□□ -0.67
UBE2D3-225ENST00000508476 MYT1Q01538 1121 aa10.87□□□□□ -0.67
UBE2D3-225ENST00000508476 EHBP1Q8NDI1 1231 aa10.87□□□□□ -0.67
UBE2D3-225ENST00000508476 SMPD1P17405 629 aa10.86□□□□□ -0.67
UBE2D3-225ENST00000508476 RFC5P40937 340 aa10.86□□□□□ -0.67
UBE2D3-225ENST00000508476 SNIP1Q8TAD8 396 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-225ENST00000508476 FOXJ1Q92949 421 aa10.86□□□□□ -0.67
UBE2D3-225ENST00000508476 SIAH2O43255 324 aa10.85□□□□□ -0.67
UBE2D3-225ENST00000508476 ST8SIA5O15466 376 aa10.83□□□□□ -0.68
UBE2D3-225ENST00000508476 C4orf48Q5BLP8 95 aa10.82□□□□□ -0.68
UBE2D3-225ENST00000508476 HMX1Q9NP08 348 aaPredicted RBP10.82□□□□□ -0.68
UBE2D3-225ENST00000508476 TLL2Q9Y6L7 1015 aa10.82□□□□□ -0.68
UBE2D3-225ENST00000508476 ALDH1A1P00352 501 aa10.81□□□□□ -0.68
UBE2D3-225ENST00000508476 USP17L8P0C7I0 530 aa10.81□□□□□ -0.68
UBE2D3-225ENST00000508476 NR6A1Q15406 480 aa10.81□□□□□ -0.68
UBE2D3-225ENST00000508476 EPS8L1Q8TE68 723 aa10.81□□□□□ -0.68
UBE2D3-225ENST00000508476 AVPP01185 164 aa10.79□□□□□ -0.68
UBE2D3-225ENST00000508476 HPS1Q92902 700 aa10.79□□□□□ -0.68
UBE2D3-225ENST00000508476 AAASQ9NRG9 546 aa10.79□□□□□ -0.68
UBE2D3-225ENST00000508476 VARSP26640 1264 aaKnown RBP10.78□□□□□ -0.68
UBE2D3-225ENST00000508476 AGERQ15109 404 aa10.77□□□□□ -0.69
UBE2D3-225ENST00000508476 DACH1Q9UI36 760 aa10.77□□□□□ -0.69
UBE2D3-225ENST00000508476 SH3BP5LQ7L8J4 393 aa10.76□□□□□ -0.69
UBE2D3-225ENST00000508476 ARMC2Q8NEN0 867 aa10.76□□□□□ -0.69
UBE2D3-225ENST00000508476 NBPF14Q5TI25 921 aa10.75□□□□□ -0.69
UBE2D3-225ENST00000508476 SH3RF1Q7Z6J0 888 aa10.75□□□□□ -0.69
UBE2D3-225ENST00000508476 FKBPLQ9UIM3 349 aa10.75□□□□□ -0.69
UBE2D3-225ENST00000508476 TMEM259Q4ZIN3 620 aa10.74□□□□□ -0.69
UBE2D3-225ENST00000508476 BPHLQ86WA6 291 aaPredicted RBP10.74□□□□□ -0.69
UBE2D3-225ENST00000508476 MAGEB6P1A0A0J9YX57 407 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 POTECB2RU33 542 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 CRIPAKQ8N1N5 446 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 FAM174AQ8TBP5 190 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 TRIM34Q9BYJ4 488 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 WASF2Q9Y6W5 498 aa10.73□□□□□ -0.69
UBE2D3-225ENST00000508476 AXIN1O15169 862 aa10.72□□□□□ -0.69
UBE2D3-225ENST00000508476 ARID5BQ14865 1188 aa10.72□□□□□ -0.69
UBE2D3-225ENST00000508476 C1QTNF2Q9BXJ5 285 aa10.71□□□□□ -0.69
UBE2D3-225ENST00000508476 SMCPP49901 116 aaPredicted RBP10.7□□□□□ -0.7
UBE2D3-225ENST00000508476 CTC1Q2NKJ3 1217 aa10.7□□□□□ -0.7
UBE2D3-225ENST00000508476 OCSTAMPQ9BR26 566 aa10.7□□□□□ -0.7
UBE2D3-225ENST00000508476 PDXDC2PQ6P474 469 aa10.69□□□□□ -0.7
UBE2D3-225ENST00000508476 MPNDQ8N594 471 aa10.69□□□□□ -0.7
UBE2D3-225ENST00000508476 GPKOWQ92917 476 aaPredicted RBP eCLIP10.69□□□□□ -0.7
UBE2D3-225ENST00000508476 GJD4Q96KN9 370 aaPredicted RBP10.69□□□□□ -0.7
UBE2D3-225ENST00000508476 CDK15Q96Q40 435 aa10.69□□□□□ -0.7
UBE2D3-225ENST00000508476 ERFEQ4G0M1 354 aa10.68□□□□□ -0.7
UBE2D3-225ENST00000508476 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
UBE2D3-225ENST00000508476 ARHGAP9Q9BRR9 750 aa10.68□□□□□ -0.7
UBE2D3-225ENST00000508476 ADH1CP00326 375 aa10.67□□□□□ -0.7
UBE2D3-225ENST00000508476 NNTQ13423 1086 aa10.67□□□□□ -0.7
UBE2D3-225ENST00000508476 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
UBE2D3-225ENST00000508476 GRM5P41594 1212 aa10.66□□□□□ -0.7
UBE2D3-225ENST00000508476 MTMR14Q8NCE2 650 aa10.66□□□□□ -0.7
UBE2D3-225ENST00000508476 ZC3H4Q9UPT8 1303 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-225ENST00000508476 NR3C2P08235 984 aa10.65□□□□□ -0.7
UBE2D3-225ENST00000508476 GMPR2Q9P2T1 348 aaKnown RBP10.65□□□□□ -0.7
UBE2D3-225ENST00000508476 TRMT44Q8IYL2 757 aaKnown RBP10.64□□□□□ -0.71
UBE2D3-225ENST00000508476 BANK1Q8NDB2 785 aa10.64□□□□□ -0.71
UBE2D3-225ENST00000508476 CAPN5O15484 640 aaPredicted RBP10.63□□□□□ -0.71
UBE2D3-225ENST00000508476 ATP13A2Q9NQ11 1180 aa10.63□□□□□ -0.71
UBE2D3-225ENST00000508476 BMP1P13497 986 aa10.62□□□□□ -0.71
UBE2D3-225ENST00000508476 FSHRP23945 695 aa10.62□□□□□ -0.71
UBE2D3-225ENST00000508476 PTK2Q05397 1052 aa10.62□□□□□ -0.71
UBE2D3-225ENST00000508476 VASH1Q7L8A9 365 aaPredicted RBP10.62□□□□□ -0.71
UBE2D3-225ENST00000508476 ZBTB33Q86T24 672 aa10.62□□□□□ -0.71
UBE2D3-225ENST00000508476 ADAM32Q8TC27 787 aa10.62□□□□□ -0.71
UBE2D3-225ENST00000508476 TIMP2P16035 220 aa10.61□□□□□ -0.71
UBE2D3-225ENST00000508476 WDR4P57081 412 aaKnown RBP10.61□□□□□ -0.71
UBE2D3-225ENST00000508476 KLF16Q9BXK1 252 aaPredicted RBP10.61□□□□□ -0.71
UBE2D3-225ENST00000508476 MAP4K5Q9Y4K4 846 aa10.61□□□□□ -0.71
UBE2D3-225ENST00000508476 GPR37L1O60883 481 aa10.6□□□□□ -0.71
UBE2D3-225ENST00000508476 NR5A1Q13285 461 aa10.6□□□□□ -0.71
UBE2D3-225ENST00000508476 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
UBE2D3-225ENST00000508476 GPSM3Q9Y4H4 160 aa10.6□□□□□ -0.71
UBE2D3-225ENST00000508476 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
UBE2D3-225ENST00000508476 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
UBE2D3-225ENST00000508476 SLC10A4Q96EP9 437 aa10.59□□□□□ -0.71
UBE2D3-225ENST00000508476 ITPKCQ96DU7 683 aa10.58□□□□□ -0.72
UBE2D3-225ENST00000508476 ZIC2O95409 532 aaPredicted RBP10.57□□□□□ -0.72
UBE2D3-225ENST00000508476 FBXO45P0C2W1 286 aa10.56□□□□□ -0.72
UBE2D3-225ENST00000508476 KCTD15Q96SI1 283 aaPredicted RBP10.56□□□□□ -0.72
UBE2D3-225ENST00000508476 C11orf95C9JLR9 678 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms