RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 NUTM2FA1L443 756 aa19.53■□□□□ 0.72
HMGCLL1-208ENST00000508459 CARD14Q9BXL6 1004 aa19.52■□□□□ 0.72
HMGCLL1-208ENST00000508459 KIF20BQ96Q89 1820 aa19.52■□□□□ 0.72
HMGCLL1-208ENST00000508459 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
HMGCLL1-208ENST00000508459 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
HMGCLL1-208ENST00000508459 MYBBP1AQ9BQG0 1328 aaKnown RBP19.51■□□□□ 0.71
HMGCLL1-208ENST00000508459 MORC1Q86VD1 984 aa19.5■□□□□ 0.71
HMGCLL1-208ENST00000508459 PMFBP1Q8TBY8 1022 aa19.5■□□□□ 0.71
HMGCLL1-208ENST00000508459 TTC21BQ7Z4L5 1316 aa19.5■□□□□ 0.71
HMGCLL1-208ENST00000508459 COG3Q96JB2 828 aa19.49■□□□□ 0.71
HMGCLL1-208ENST00000508459 NRKQ7Z2Y5 1582 aa19.49■□□□□ 0.71
HMGCLL1-208ENST00000508459 SBNO1A3KN83 1393 aa19.48■□□□□ 0.71
HMGCLL1-208ENST00000508459 NLRP13Q86W25 1043 aa19.48■□□□□ 0.71
HMGCLL1-208ENST00000508459 SSH2Q76I76 1423 aa19.47■□□□□ 0.71
HMGCLL1-208ENST00000508459 ARHGEF10O15013 1369 aa19.46■□□□□ 0.71
HMGCLL1-208ENST00000508459 CC2D1BQ5T0F9 858 aaKnown RBP19.46■□□□□ 0.71
HMGCLL1-208ENST00000508459 USP31Q70CQ4 1352 aa19.45■□□□□ 0.7
HMGCLL1-208ENST00000508459 FYB1O15117 783 aa19.45■□□□□ 0.7
HMGCLL1-208ENST00000508459 ORAI2Q96SN7 254 aa19.45■□□□□ 0.7
HMGCLL1-208ENST00000508459 FOXO3O43524 673 aa19.44■□□□□ 0.7
HMGCLL1-208ENST00000508459 BRINP3Q76B58 766 aa19.44■□□□□ 0.7
HMGCLL1-208ENST00000508459 KRT28Q7Z3Y7 464 aa19.44■□□□□ 0.7
HMGCLL1-208ENST00000508459 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.44■□□□□ 0.7
HMGCLL1-208ENST00000508459 USP54Q70EL1 1684 aa19.43■□□□□ 0.7
HMGCLL1-208ENST00000508459 KCNH5Q8NCM2 988 aa19.43■□□□□ 0.7
HMGCLL1-208ENST00000508459 CERKQ8TCT0 537 aa19.43■□□□□ 0.7
HMGCLL1-208ENST00000508459 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
HMGCLL1-208ENST00000508459 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
HMGCLL1-208ENST00000508459 ABTB2Q8N961 1025 aa19.42■□□□□ 0.7
HMGCLL1-208ENST00000508459 AATKQ6ZMQ8 1374 aa19.42■□□□□ 0.7
HMGCLL1-208ENST00000508459 MIER1Q8N108 512 aa19.41■□□□□ 0.7
HMGCLL1-208ENST00000508459 KIF24Q5T7B8 1368 aa19.41■□□□□ 0.7
HMGCLL1-208ENST00000508459 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
HMGCLL1-208ENST00000508459 AHDC1Q5TGY3 1603 aaPredicted RBP19.39■□□□□ 0.69
HMGCLL1-208ENST00000508459 OVOS2A0A0J9YW53 1432 aa19.38■□□□□ 0.69
HMGCLL1-208ENST00000508459 NLRP6P59044 892 aa19.38■□□□□ 0.69
HMGCLL1-208ENST00000508459 SOS2Q07890 1332 aaPredicted RBP19.38■□□□□ 0.69
HMGCLL1-208ENST00000508459 TNS3Q68CZ2 1445 aa19.38■□□□□ 0.69
HMGCLL1-208ENST00000508459 OVOS2Q6IE36 1432 aa19.38■□□□□ 0.69
HMGCLL1-208ENST00000508459 GGNBP2Q9H3C7 697 aa19.38■□□□□ 0.69
HMGCLL1-208ENST00000508459 TRPM3Q9HCF6 1732 aaPredicted RBP19.37■□□□□ 0.69
HMGCLL1-208ENST00000508459 UBAP1LF5GYI3 381 aa19.37■□□□□ 0.69
HMGCLL1-208ENST00000508459 LRRC59Q96AG4 307 aaKnown RBP19.37■□□□□ 0.69
HMGCLL1-208ENST00000508459 ROBO1Q9Y6N7 1651 aa19.36■□□□□ 0.69
HMGCLL1-208ENST00000508459 PXDNQ92626 1479 aa19.36■□□□□ 0.69
HMGCLL1-208ENST00000508459 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
HMGCLL1-208ENST00000508459 NME9Q86XW9 330 aa19.36■□□□□ 0.69
HMGCLL1-208ENST00000508459 PIK3C2AO00443 1686 aa19.36■□□□□ 0.69
HMGCLL1-208ENST00000508459 MRS2Q9HD23 443 aa19.35■□□□□ 0.69
HMGCLL1-208ENST00000508459 SPATA31A3Q5VYP0 1347 aa19.34■□□□□ 0.69
HMGCLL1-208ENST00000508459 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
HMGCLL1-208ENST00000508459 ALS2Q96Q42 1657 aa19.33■□□□□ 0.69
HMGCLL1-208ENST00000508459 MED1Q15648 1581 aaPredicted RBP19.32■□□□□ 0.68
HMGCLL1-208ENST00000508459 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
HMGCLL1-208ENST00000508459 RTL1A6NKG5 1358 aa19.32■□□□□ 0.68
HMGCLL1-208ENST00000508459 LMOD2Q6P5Q4 547 aa19.31■□□□□ 0.68
HMGCLL1-208ENST00000508459 SMG6Q86US8 1419 aaKnown RBP19.31■□□□□ 0.68
HMGCLL1-208ENST00000508459 INSRP06213 1382 aa19.31■□□□□ 0.68
HMGCLL1-208ENST00000508459 USP19O94966 1318 aa19.3■□□□□ 0.68
HMGCLL1-208ENST00000508459 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
HMGCLL1-208ENST00000508459 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
HMGCLL1-208ENST00000508459 ABCC6O95255 1503 aa19.3■□□□□ 0.68
HMGCLL1-208ENST00000508459 CDK12Q9NYV4 1490 aaPredicted RBP19.29■□□□□ 0.68
HMGCLL1-208ENST00000508459 SLIT3O75094 1523 aa19.29■□□□□ 0.68
HMGCLL1-208ENST00000508459 WDR43Q15061 677 aaKnown RBP eCLIP19.28■□□□□ 0.68
HMGCLL1-208ENST00000508459 PHLPP1O60346 1717 aa19.28■□□□□ 0.68
HMGCLL1-208ENST00000508459 MTHFSP49914 203 aa19.27■□□□□ 0.68
HMGCLL1-208ENST00000508459 MAP2P11137 1827 aaKnown RBP19.27■□□□□ 0.68
HMGCLL1-208ENST00000508459 TNNT2P45379 298 aaPredicted RBP19.26■□□□□ 0.67
HMGCLL1-208ENST00000508459 HAP1P54257 671 aaPredicted RBP19.26■□□□□ 0.67
HMGCLL1-208ENST00000508459 FLT4P35916 1363 aa19.26■□□□□ 0.67
HMGCLL1-208ENST00000508459 PHRF1Q9P1Y6 1649 aaKnown RBP19.25■□□□□ 0.67
HMGCLL1-208ENST00000508459 PNPLA6Q8IY17 1366 aa19.25■□□□□ 0.67
HMGCLL1-208ENST00000508459 GCP02774 474 aa19.25■□□□□ 0.67
HMGCLL1-208ENST00000508459 XPCQ01831 940 aaPredicted RBP19.25■□□□□ 0.67
HMGCLL1-208ENST00000508459 AMPHP49418 695 aa19.24■□□□□ 0.67
HMGCLL1-208ENST00000508459 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
HMGCLL1-208ENST00000508459 POLKQ9UBT6 870 aa19.24■□□□□ 0.67
HMGCLL1-208ENST00000508459 COL22A1Q8NFW1 1626 aaPredicted RBP19.22■□□□□ 0.67
HMGCLL1-208ENST00000508459 CPDO75976 1380 aa19.22■□□□□ 0.67
HMGCLL1-208ENST00000508459 DIAPH1O60610 1272 aaKnown RBP19.22■□□□□ 0.67
HMGCLL1-208ENST00000508459 NEFMP07197 916 aa19.22■□□□□ 0.67
HMGCLL1-208ENST00000508459 NGEFQ8N5V2 710 aa19.22■□□□□ 0.67
HMGCLL1-208ENST00000508459 BLMP54132 1417 aaPredicted RBP19.22■□□□□ 0.67
HMGCLL1-208ENST00000508459 NFAT5O94916 1531 aa19.21■□□□□ 0.67
HMGCLL1-208ENST00000508459 MARF1Q9Y4F3 1742 aaKnown RBP19.21■□□□□ 0.67
HMGCLL1-208ENST00000508459 COL16A1Q07092 1604 aaPredicted RBP19.2■□□□□ 0.66
HMGCLL1-208ENST00000508459 PPM1GO15355 546 aaPredicted RBP19.19■□□□□ 0.66
HMGCLL1-208ENST00000508459 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
HMGCLL1-208ENST00000508459 NUTM2GQ5VZR2 741 aa19.19■□□□□ 0.66
HMGCLL1-208ENST00000508459 PNISRQ8TF01 805 aaKnown RBP19.19■□□□□ 0.66
HMGCLL1-208ENST00000508459 ZRANB1Q9UGI0 708 aa19.19■□□□□ 0.66
HMGCLL1-208ENST00000508459 JCADQ9P266 1359 aa19.19■□□□□ 0.66
HMGCLL1-208ENST00000508459 ARHGEF25Q86VW2 580 aa19.18■□□□□ 0.66
HMGCLL1-208ENST00000508459 IP6K1Q92551 441 aa19.18■□□□□ 0.66
HMGCLL1-208ENST00000508459 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
HMGCLL1-208ENST00000508459 MAP3K19Q56UN5 1328 aa19.18■□□□□ 0.66
HMGCLL1-208ENST00000508459 LTN1O94822 1766 aa19.17■□□□□ 0.66
HMGCLL1-208ENST00000508459 DDX17Q92841 729 aaKnown RBP19.17■□□□□ 0.66
HMGCLL1-208ENST00000508459 SHPRHQ149N8 1683 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms