RNA–Protein interactions for RNA: ENST00000508452.1

LINC01959-201, Transcript of long intergenic non-protein coding RNA 1959, humanhuman

TSL 1 (best) BASIC

Gene LINC01959, Length 2,141 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01959-201ENST00000508452 PANK1Q8TE04 598 aa13.16□□□□□ -0.3
LINC01959-201ENST00000508452 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
LINC01959-201ENST00000508452 RRP7AQ9Y3A4 280 aaKnown RBP13.16□□□□□ -0.3
LINC01959-201ENST00000508452 ARHGEF40Q8TER5 1519 aa13.15□□□□□ -0.3
LINC01959-201ENST00000508452 FYB1O15117 783 aa13.15□□□□□ -0.3
LINC01959-201ENST00000508452 RGS3P49796 1198 aa13.15□□□□□ -0.3
LINC01959-201ENST00000508452 RWDD1Q9H446 243 aaPredicted RBP13.15□□□□□ -0.3
LINC01959-201ENST00000508452 ALKQ9UM73 1620 aa13.15□□□□□ -0.3
LINC01959-201ENST00000508452 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
LINC01959-201ENST00000508452 FRAT1Q92837 279 aaPredicted RBP13.15□□□□□ -0.3
LINC01959-201ENST00000508452 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
LINC01959-201ENST00000508452 NEFMP07197 916 aa13.14□□□□□ -0.31
LINC01959-201ENST00000508452 TMPOP42166 694 aaKnown RBP13.14□□□□□ -0.31
LINC01959-201ENST00000508452 ZKSCAN2Q63HK3 967 aa13.14□□□□□ -0.31
LINC01959-201ENST00000508452 STK26Q9P289 416 aa13.14□□□□□ -0.31
LINC01959-201ENST00000508452 CD163L1Q9NR16 1453 aa13.14□□□□□ -0.31
LINC01959-201ENST00000508452 RTN4Q9NQC3 1192 aaKnown RBP13.13□□□□□ -0.31
LINC01959-201ENST00000508452 NLRP1Q9C000 1473 aa13.13□□□□□ -0.31
LINC01959-201ENST00000508452 RIMS1Q86UR5 1692 aaKnown RBP13.13□□□□□ -0.31
LINC01959-201ENST00000508452 DIAPH1O60610 1272 aaKnown RBP13.12□□□□□ -0.31
LINC01959-201ENST00000508452 MVPQ14764 893 aaKnown RBP13.12□□□□□ -0.31
LINC01959-201ENST00000508452 MYO5BQ9ULV0 1848 aa13.12□□□□□ -0.31
LINC01959-201ENST00000508452 FCHSD2O94868 740 aa13.12□□□□□ -0.31
LINC01959-201ENST00000508452 ZNF428Q96B54 188 aa13.12□□□□□ -0.31
LINC01959-201ENST00000508452 CDK19Q9BWU1 502 aa13.12□□□□□ -0.31
LINC01959-201ENST00000508452 GGNBP2Q9H3C7 697 aa13.12□□□□□ -0.31
LINC01959-201ENST00000508452 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
LINC01959-201ENST00000508452 ATP7BP35670 1465 aa13.11□□□□□ -0.31
LINC01959-201ENST00000508452 SAFB2Q14151 953 aaKnown RBP eCLIP13.11□□□□□ -0.31
LINC01959-201ENST00000508452 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
LINC01959-201ENST00000508452 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
LINC01959-201ENST00000508452 DZIP1LQ8IYY4 767 aaKnown RBP13.1□□□□□ -0.31
LINC01959-201ENST00000508452 TRIM35Q9UPQ4 493 aa13.1□□□□□ -0.31
LINC01959-201ENST00000508452 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
LINC01959-201ENST00000508452 U2SURPO15042 1029 aaKnown RBP13.1□□□□□ -0.31
LINC01959-201ENST00000508452 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
LINC01959-201ENST00000508452 SPATA31D1Q6ZQQ2 1576 aa13.09□□□□□ -0.31
LINC01959-201ENST00000508452 RLBP1P12271 317 aa13.09□□□□□ -0.31
LINC01959-201ENST00000508452 FBXO31Q5XUX0 539 aaPredicted RBP13.09□□□□□ -0.31
LINC01959-201ENST00000508452 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01959-201ENST00000508452 LAS1LQ9Y4W2 734 aaKnown RBP13.09□□□□□ -0.31
LINC01959-201ENST00000508452 PCDHB15Q9Y5E8 787 aa13.09□□□□□ -0.31
LINC01959-201ENST00000508452 IPO8O15397 1037 aaKnown RBP13.09□□□□□ -0.31
LINC01959-201ENST00000508452 UBE2Q2Q8WVN8 375 aa13.09□□□□□ -0.31
LINC01959-201ENST00000508452 A2ML1A8K2U0 1454 aa13.08□□□□□ -0.32
LINC01959-201ENST00000508452 BRPF1P55201 1214 aaPredicted RBP13.08□□□□□ -0.32
LINC01959-201ENST00000508452 MLECQ14165 292 aa13.08□□□□□ -0.32
LINC01959-201ENST00000508452 ALDH1L2Q3SY69 923 aa13.08□□□□□ -0.32
LINC01959-201ENST00000508452 FTSJ3Q8IY81 847 aaKnown RBP13.08□□□□□ -0.32
LINC01959-201ENST00000508452 DDX19BQ9UMR2 479 aa13.08□□□□□ -0.32
LINC01959-201ENST00000508452 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
LINC01959-201ENST00000508452 HDAC1Q13547 482 aaPredicted RBP13.07□□□□□ -0.32
LINC01959-201ENST00000508452 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
LINC01959-201ENST00000508452 HDGFP51858 240 aaKnown RBP13.07□□□□□ -0.32
LINC01959-201ENST00000508452 RIPK4P57078 832 aa13.07□□□□□ -0.32
LINC01959-201ENST00000508452 EXOSC9Q06265 439 aaKnown RBP13.07□□□□□ -0.32
LINC01959-201ENST00000508452 BECN1Q14457 450 aa13.07□□□□□ -0.32
LINC01959-201ENST00000508452 UPF2Q9HAU5 1272 aaKnown RBP13.07□□□□□ -0.32
LINC01959-201ENST00000508452 USP19O94966 1318 aa13.07□□□□□ -0.32
LINC01959-201ENST00000508452 KIF16BQ96L93 1317 aa13.07□□□□□ -0.32
LINC01959-201ENST00000508452 ATF7IPQ6VMQ6 1270 aa13.06□□□□□ -0.32
LINC01959-201ENST00000508452 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
LINC01959-201ENST00000508452 PDZRN3Q9UPQ7 1066 aa13.06□□□□□ -0.32
LINC01959-201ENST00000508452 KIF20BQ96Q89 1820 aa13.06□□□□□ -0.32
LINC01959-201ENST00000508452 RIMS2Q9UQ26 1411 aa13.06□□□□□ -0.32
LINC01959-201ENST00000508452 PPIP5K1Q6PFW1 1433 aa13.06□□□□□ -0.32
LINC01959-201ENST00000508452 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
LINC01959-201ENST00000508452 NFKBIBQ15653 356 aa13.05□□□□□ -0.32
LINC01959-201ENST00000508452 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
LINC01959-201ENST00000508452 FER1L4A9Z1Z3 1794 aa13.04□□□□□ -0.32
LINC01959-201ENST00000508452 AATKQ6ZMQ8 1374 aa13.04□□□□□ -0.32
LINC01959-201ENST00000508452 CPSF1Q10570 1443 aaKnown RBP13.04□□□□□ -0.32
LINC01959-201ENST00000508452 EDC4Q6P2E9 1401 aaKnown RBP13.04□□□□□ -0.32
LINC01959-201ENST00000508452 SSH1Q8WYL5 1049 aa13.04□□□□□ -0.32
LINC01959-201ENST00000508452 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
LINC01959-201ENST00000508452 PODXL2Q9NZ53 605 aa13.04□□□□□ -0.32
LINC01959-201ENST00000508452 FAM135BQ49AJ0 1406 aa13.03□□□□□ -0.32
LINC01959-201ENST00000508452 TRIM27P14373 513 aa13.03□□□□□ -0.32
LINC01959-201ENST00000508452 POLKQ9UBT6 870 aa13.03□□□□□ -0.32
LINC01959-201ENST00000508452 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
LINC01959-201ENST00000508452 RSPH6AQ9H0K4 717 aa13.03□□□□□ -0.32
LINC01959-201ENST00000508452 SETD1AO15047 1707 aaKnown RBP13.03□□□□□ -0.32
LINC01959-201ENST00000508452 WASLO00401 505 aaPredicted RBP13.02□□□□□ -0.33
LINC01959-201ENST00000508452 ARHGAP45Q92619 1136 aa13.02□□□□□ -0.33
LINC01959-201ENST00000508452 TNNQ9UQP3 1299 aa13.02□□□□□ -0.33
LINC01959-201ENST00000508452 SMC5Q8IY18 1101 aa13.01□□□□□ -0.33
LINC01959-201ENST00000508452 NFE2L2Q16236 605 aa13.01□□□□□ -0.33
LINC01959-201ENST00000508452 TBC1D32Q96NH3 1257 aa13.01□□□□□ -0.33
LINC01959-201ENST00000508452 NOB1Q9ULX3 412 aaKnown RBP13.01□□□□□ -0.33
LINC01959-201ENST00000508452 TECPR2O15040 1411 aa13.01□□□□□ -0.33
LINC01959-201ENST00000508452 SLC4A3P48751 1232 aa13□□□□□ -0.33
LINC01959-201ENST00000508452 HSPA2P54652 639 aa13□□□□□ -0.33
LINC01959-201ENST00000508452 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
LINC01959-201ENST00000508452 ZNF692Q9BU19 519 aaPredicted RBP13□□□□□ -0.33
LINC01959-201ENST00000508452 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
LINC01959-201ENST00000508452 GSE1Q14687 1217 aa13□□□□□ -0.33
LINC01959-201ENST00000508452 CDK12Q9NYV4 1490 aaPredicted RBP12.99□□□□□ -0.33
LINC01959-201ENST00000508452 SEC24BO95487 1268 aa12.99□□□□□ -0.33
LINC01959-201ENST00000508452 GNAI1P63096 354 aa12.99□□□□□ -0.33
LINC01959-201ENST00000508452 WAPLQ7Z5K2 1190 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms