RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 ARHGEF10O15013 1369 aa14.19□□□□□ -0.14
HTT-204ENST00000508321 KTN1Q86UP2 1357 aaKnown RBP14.19□□□□□ -0.14
HTT-204ENST00000508321 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 SSH2Q76I76 1423 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 PIK3C2AO00443 1686 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 FOXO3O43524 673 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 PMFBP1Q8TBY8 1022 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 ABCA3Q99758 1704 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 ANKRD26Q9UPS8 1709 aa14.18□□□□□ -0.14
HTT-204ENST00000508321 CRYBG1Q9Y4K1 1723 aa14.17□□□□□ -0.14
HTT-204ENST00000508321 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
HTT-204ENST00000508321 C11orf95C9JLR9 678 aaPredicted RBP14.16□□□□□ -0.14
HTT-204ENST00000508321 SLC12A5Q9H2X9 1139 aa14.16□□□□□ -0.14
HTT-204ENST00000508321 JCADQ9P266 1359 aa14.15□□□□□ -0.14
HTT-204ENST00000508321 KRT28Q7Z3Y7 464 aa14.15□□□□□ -0.14
HTT-204ENST00000508321 LRRC59Q96AG4 307 aaKnown RBP14.15□□□□□ -0.14
HTT-204ENST00000508321 POLR3GLQ9BT43 218 aa14.15□□□□□ -0.14
HTT-204ENST00000508321 MARF1Q9Y4F3 1742 aaKnown RBP14.14□□□□□ -0.15
HTT-204ENST00000508321 PHRF1Q9P1Y6 1649 aaKnown RBP14.14□□□□□ -0.15
HTT-204ENST00000508321 NSD3Q9BZ95 1437 aa14.14□□□□□ -0.15
HTT-204ENST00000508321 SPATA31A3Q5VYP0 1347 aa14.14□□□□□ -0.15
HTT-204ENST00000508321 NSD2O96028 1365 aa14.13□□□□□ -0.15
HTT-204ENST00000508321 PNPLA6Q8IY17 1366 aa14.12□□□□□ -0.15
HTT-204ENST00000508321 TTC21BQ7Z4L5 1316 aa14.12□□□□□ -0.15
HTT-204ENST00000508321 SLIT3O75094 1523 aa14.11□□□□□ -0.15
HTT-204ENST00000508321 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
HTT-204ENST00000508321 DDX17Q92841 729 aaKnown RBP14.11□□□□□ -0.15
HTT-204ENST00000508321 CGNL1Q0VF96 1302 aa14.11□□□□□ -0.15
HTT-204ENST00000508321 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
HTT-204ENST00000508321 USP31Q70CQ4 1352 aa14.1□□□□□ -0.15
HTT-204ENST00000508321 OVOS2A0A0J9YW53 1432 aa14.1□□□□□ -0.15
HTT-204ENST00000508321 OVOS2Q6IE36 1432 aa14.1□□□□□ -0.15
HTT-204ENST00000508321 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
HTT-204ENST00000508321 NPC1L1Q9UHC9 1359 aa14.09□□□□□ -0.15
HTT-204ENST00000508321 PAK3O75914 559 aaPredicted RBP14.09□□□□□ -0.15
HTT-204ENST00000508321 PANK3Q9H999 370 aa14.09□□□□□ -0.15
HTT-204ENST00000508321 ABCC6O95255 1503 aa14.09□□□□□ -0.15
HTT-204ENST00000508321 USP19O94966 1318 aa14.09□□□□□ -0.15
HTT-204ENST00000508321 ABTB2Q8N961 1025 aa14.07□□□□□ -0.16
HTT-204ENST00000508321 PHF23Q9BUL5 403 aaPredicted RBP14.07□□□□□ -0.16
HTT-204ENST00000508321 NLRP13Q86W25 1043 aa14.06□□□□□ -0.16
HTT-204ENST00000508321 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
HTT-204ENST00000508321 NFAT5O94916 1531 aa14.05□□□□□ -0.16
HTT-204ENST00000508321 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.05□□□□□ -0.16
HTT-204ENST00000508321 CARD14Q9BXL6 1004 aa14.05□□□□□ -0.16
HTT-204ENST00000508321 LTN1O94822 1766 aa14.04□□□□□ -0.16
HTT-204ENST00000508321 LMOD2Q6P5Q4 547 aa14.04□□□□□ -0.16
HTT-204ENST00000508321 COL14A1Q05707 1796 aaKnown RBP14.04□□□□□ -0.16
HTT-204ENST00000508321 NME9Q86XW9 330 aa14.03□□□□□ -0.16
HTT-204ENST00000508321 KCNH5Q8NCM2 988 aa14.03□□□□□ -0.16
HTT-204ENST00000508321 COG3Q96JB2 828 aa14.03□□□□□ -0.16
HTT-204ENST00000508321 NWD2Q9ULI1 1742 aa14.03□□□□□ -0.16
HTT-204ENST00000508321 LRP6O75581 1613 aa14.02□□□□□ -0.16
HTT-204ENST00000508321 CPDO75976 1380 aa14.02□□□□□ -0.17
HTT-204ENST00000508321 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
HTT-204ENST00000508321 NLRP6P59044 892 aa14.02□□□□□ -0.17
HTT-204ENST00000508321 PLCH1Q4KWH8 1693 aa14.01□□□□□ -0.17
HTT-204ENST00000508321 FYB1O15117 783 aa14.01□□□□□ -0.17
HTT-204ENST00000508321 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
HTT-204ENST00000508321 RGS17Q9UGC6 210 aaPredicted RBP14.01□□□□□ -0.17
HTT-204ENST00000508321 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.01□□□□□ -0.17
HTT-204ENST00000508321 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
HTT-204ENST00000508321 LMO7Q8WWI1 1683 aa14□□□□□ -0.17
HTT-204ENST00000508321 RTL1A6NKG5 1358 aa13.99□□□□□ -0.17
HTT-204ENST00000508321 KIF24Q5T7B8 1368 aa13.99□□□□□ -0.17
HTT-204ENST00000508321 AATKQ6ZMQ8 1374 aa13.99□□□□□ -0.17
HTT-204ENST00000508321 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
HTT-204ENST00000508321 SMG6Q86US8 1419 aaKnown RBP13.98□□□□□ -0.17
HTT-204ENST00000508321 DDX10Q13206 875 aaKnown RBP13.98□□□□□ -0.17
HTT-204ENST00000508321 GGNBP2Q9H3C7 697 aa13.98□□□□□ -0.17
HTT-204ENST00000508321 NRAPQ86VF7 1730 aa13.98□□□□□ -0.17
HTT-204ENST00000508321 MAP2P11137 1827 aaKnown RBP13.97□□□□□ -0.17
HTT-204ENST00000508321 GCP02774 474 aa13.97□□□□□ -0.17
HTT-204ENST00000508321 NUTM2GQ5VZR2 741 aa13.97□□□□□ -0.17
HTT-204ENST00000508321 COL18A1P39060 1754 aa13.96□□□□□ -0.17
HTT-204ENST00000508321 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.18
HTT-204ENST00000508321 KIAA0232Q92628 1395 aa13.96□□□□□ -0.18
HTT-204ENST00000508321 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
HTT-204ENST00000508321 BLMP54132 1417 aaPredicted RBP13.95□□□□□ -0.18
HTT-204ENST00000508321 SLIT2O94813 1529 aa13.95□□□□□ -0.18
HTT-204ENST00000508321 MEX3CQ5U5Q3 659 aaKnown RBP13.94□□□□□ -0.18
HTT-204ENST00000508321 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
HTT-204ENST00000508321 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
HTT-204ENST00000508321 PRDM11Q9NQV5 511 aa13.94□□□□□ -0.18
HTT-204ENST00000508321 PEAK1Q9H792 1746 aa13.93□□□□□ -0.18
HTT-204ENST00000508321 NUTM2BA6NNL0 878 aaPredicted RBP13.93□□□□□ -0.18
HTT-204ENST00000508321 NUTM2EB1AL46 878 aaPredicted RBP13.93□□□□□ -0.18
HTT-204ENST00000508321 NUTM2AQ8IVF1 878 aaPredicted RBP13.93□□□□□ -0.18
HTT-204ENST00000508321 ZRANB1Q9UGI0 708 aa13.93□□□□□ -0.18
HTT-204ENST00000508321 FLT4P35916 1363 aa13.93□□□□□ -0.18
HTT-204ENST00000508321 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
HTT-204ENST00000508321 ARHGEF25Q86VW2 580 aa13.92□□□□□ -0.18
HTT-204ENST00000508321 RGPD5Q99666 1765 aa13.91□□□□□ -0.18
HTT-204ENST00000508321 RALBP1Q15311 655 aa13.91□□□□□ -0.18
HTT-204ENST00000508321 COL5A2P05997 1499 aaPredicted RBP13.91□□□□□ -0.18
HTT-204ENST00000508321 ADAMTS2O95450 1211 aa13.9□□□□□ -0.18
HTT-204ENST00000508321 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.18
HTT-204ENST00000508321 MAP3K19Q56UN5 1328 aa13.9□□□□□ -0.19
HTT-204ENST00000508321 SOX12O15370 315 aa13.89□□□□□ -0.19
HTT-204ENST00000508321 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms