RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 PLEKHG3A1L390 1219 aa11.88□□□□□ -0.51
TRAPPC13-209ENST00000508304 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
TRAPPC13-209ENST00000508304 LYPD8Q6UX82 237 aa11.88□□□□□ -0.51
TRAPPC13-209ENST00000508304 NPAS3Q8IXF0 933 aa11.88□□□□□ -0.51
TRAPPC13-209ENST00000508304 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
TRAPPC13-209ENST00000508304 NNTQ13423 1086 aa11.87□□□□□ -0.51
TRAPPC13-209ENST00000508304 PARP9Q8IXQ6 854 aa11.87□□□□□ -0.51
TRAPPC13-209ENST00000508304 PCDHB15Q9Y5E8 787 aa11.87□□□□□ -0.51
TRAPPC13-209ENST00000508304 CFAP99D6REC4 459 aa11.86□□□□□ -0.51
TRAPPC13-209ENST00000508304 SPTLC1O15269 473 aa11.85□□□□□ -0.51
TRAPPC13-209ENST00000508304 ZFP42Q96MM3 310 aa11.85□□□□□ -0.51
TRAPPC13-209ENST00000508304 CTHP32929 405 aa11.84□□□□□ -0.51
TRAPPC13-209ENST00000508304 F12P00748 615 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC13-209ENST00000508304 TIMP2P16035 220 aa11.83□□□□□ -0.52
TRAPPC13-209ENST00000508304 HRCP23327 699 aa11.83□□□□□ -0.52
TRAPPC13-209ENST00000508304 H3BM21 787 aa11.82□□□□□ -0.52
TRAPPC13-209ENST00000508304 TRIM66O15016 1216 aa11.82□□□□□ -0.52
TRAPPC13-209ENST00000508304 GMPRP36959 345 aa11.82□□□□□ -0.52
TRAPPC13-209ENST00000508304 FAM174AQ8TBP5 190 aa11.82□□□□□ -0.52
TRAPPC13-209ENST00000508304 KLF16Q9BXK1 252 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC13-209ENST00000508304 ZBTB3Q9H5J0 574 aa11.82□□□□□ -0.52
TRAPPC13-209ENST00000508304 ADH1CP00326 375 aa11.81□□□□□ -0.52
TRAPPC13-209ENST00000508304 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
TRAPPC13-209ENST00000508304 MRPL14Q6P1L8 145 aaKnown RBP11.81□□□□□ -0.52
TRAPPC13-209ENST00000508304 IRF7Q92985 503 aa11.81□□□□□ -0.52
TRAPPC13-209ENST00000508304 CDK15Q96Q40 435 aa11.81□□□□□ -0.52
TRAPPC13-209ENST00000508304 MAP10Q9P2G4 905 aa11.81□□□□□ -0.52
TRAPPC13-209ENST00000508304 VEGFBP49765 207 aa11.8□□□□□ -0.52
TRAPPC13-209ENST00000508304 WDR4P57081 412 aaKnown RBP11.8□□□□□ -0.52
TRAPPC13-209ENST00000508304 FOXJ1Q92949 421 aa11.8□□□□□ -0.52
TRAPPC13-209ENST00000508304 RIC3Q7Z5B4 369 aa11.79□□□□□ -0.52
TRAPPC13-209ENST00000508304 LORP23490 312 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC13-209ENST00000508304 CABLES1Q8TDN4 633 aa11.78□□□□□ -0.52
TRAPPC13-209ENST00000508304 ERBB4Q15303 1308 aa11.77□□□□□ -0.53
TRAPPC13-209ENST00000508304 SCARF1Q14162 830 aa11.76□□□□□ -0.53
TRAPPC13-209ENST00000508304 C4orf48Q5BLP8 95 aa11.76□□□□□ -0.53
TRAPPC13-209ENST00000508304 AK7Q96M32 723 aa11.76□□□□□ -0.53
TRAPPC13-209ENST00000508304 PURBQ96QR8 312 aaKnown RBP11.76□□□□□ -0.53
TRAPPC13-209ENST00000508304 PER1O15534 1290 aaPredicted RBP11.75□□□□□ -0.53
TRAPPC13-209ENST00000508304 NR5A1Q13285 461 aa11.73□□□□□ -0.53
TRAPPC13-209ENST00000508304 ARID5BQ14865 1188 aa11.73□□□□□ -0.53
TRAPPC13-209ENST00000508304 CSPP1Q1MSJ5 1256 aa11.73□□□□□ -0.53
TRAPPC13-209ENST00000508304 ZSCAN1Q8NBB4 408 aa11.73□□□□□ -0.53
TRAPPC13-209ENST00000508304 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
TRAPPC13-209ENST00000508304 NR3C2P08235 984 aa11.72□□□□□ -0.53
TRAPPC13-209ENST00000508304 TUSC1Q2TAM9 212 aa11.72□□□□□ -0.53
TRAPPC13-209ENST00000508304 ZFAND3Q9H8U3 227 aa11.72□□□□□ -0.53
TRAPPC13-209ENST00000508304 LIMD1Q9UGP4 676 aa11.72□□□□□ -0.53
TRAPPC13-209ENST00000508304 SOBPA7XYQ1 873 aa11.71□□□□□ -0.53
TRAPPC13-209ENST00000508304 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC13-209ENST00000508304 GRM5P41594 1212 aa11.71□□□□□ -0.53
TRAPPC13-209ENST00000508304 MYSM1Q5VVJ2 828 aa11.71□□□□□ -0.53
TRAPPC13-209ENST00000508304 BPHLQ86WA6 291 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC13-209ENST00000508304 ITPKCQ96DU7 683 aa11.71□□□□□ -0.53
TRAPPC13-209ENST00000508304 AGERQ15109 404 aa11.7□□□□□ -0.54
TRAPPC13-209ENST00000508304 QPCTQ16769 361 aa11.7□□□□□ -0.54
TRAPPC13-209ENST00000508304 LILRB3O75022 631 aa11.69□□□□□ -0.54
TRAPPC13-209ENST00000508304 VSIG8P0DPA2 414 aa11.68□□□□□ -0.54
TRAPPC13-209ENST00000508304 SH3RF1Q7Z6J0 888 aa11.68□□□□□ -0.54
TRAPPC13-209ENST00000508304 C1QTNF2Q9BXJ5 285 aa11.68□□□□□ -0.54
TRAPPC13-209ENST00000508304 PDE4DQ08499 809 aa11.67□□□□□ -0.54
TRAPPC13-209ENST00000508304 ARMC2Q8NEN0 867 aa11.67□□□□□ -0.54
TRAPPC13-209ENST00000508304 NUTM2BA6NNL0 878 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC13-209ENST00000508304 NUTM2EB1AL46 878 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC13-209ENST00000508304 NUTM2DQ5VT03 806 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC13-209ENST00000508304 NUTM2AQ8IVF1 878 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC13-209ENST00000508304 TSC1Q92574 1164 aa11.66□□□□□ -0.54
TRAPPC13-209ENST00000508304 C6orf118Q5T5N4 469 aa11.64□□□□□ -0.55
TRAPPC13-209ENST00000508304 MEIOBQ8N635 442 aa11.64□□□□□ -0.55
TRAPPC13-209ENST00000508304 MAP4K5Q9Y4K4 846 aa11.64□□□□□ -0.55
TRAPPC13-209ENST00000508304 NBPF14Q5TI25 921 aa11.63□□□□□ -0.55
TRAPPC13-209ENST00000508304 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
TRAPPC13-209ENST00000508304 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
TRAPPC13-209ENST00000508304 LINC00528Q8N1L1 170 aa11.63□□□□□ -0.55
TRAPPC13-209ENST00000508304 MAN1A2O60476 641 aa11.62□□□□□ -0.55
TRAPPC13-209ENST00000508304 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC13-209ENST00000508304 HELBQ8NG08 1087 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC13-209ENST00000508304 FSHRP23945 695 aa11.61□□□□□ -0.55
TRAPPC13-209ENST00000508304 BMP2P12643 396 aa11.6□□□□□ -0.55
TRAPPC13-209ENST00000508304 CLK2P49760 499 aaKnown RBP11.6□□□□□ -0.55
TRAPPC13-209ENST00000508304 UPP2O95045 317 aa11.59□□□□□ -0.55
TRAPPC13-209ENST00000508304 SOS2Q07890 1332 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC13-209ENST00000508304 VASH1Q7L8A9 365 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC13-209ENST00000508304 PPFIA3O75145 1194 aa11.57□□□□□ -0.56
TRAPPC13-209ENST00000508304 GPKOWQ92917 476 aaPredicted RBP eCLIP11.57□□□□□ -0.56
TRAPPC13-209ENST00000508304 SLC24A3Q9HC58 644 aa11.57□□□□□ -0.56
TRAPPC13-209ENST00000508304 MAGEB6P1A0A0J9YX57 407 aa11.56□□□□□ -0.56
TRAPPC13-209ENST00000508304 DNMT3LQ9UJW3 386 aa11.56□□□□□ -0.56
TRAPPC13-209ENST00000508304 EMILIN1Q9Y6C2 1016 aa11.56□□□□□ -0.56
TRAPPC13-209ENST00000508304 CCDC116Q8IYX3 515 aa11.55□□□□□ -0.56
TRAPPC13-209ENST00000508304 ERFEQ4G0M1 354 aa11.54□□□□□ -0.56
TRAPPC13-209ENST00000508304 TSEN34Q9BSV6 310 aaKnown RBP11.54□□□□□ -0.56
TRAPPC13-209ENST00000508304 RSPH6AQ9H0K4 717 aa11.54□□□□□ -0.56
TRAPPC13-209ENST00000508304 CARD14Q9BXL6 1004 aa11.53□□□□□ -0.56
TRAPPC13-209ENST00000508304 CTDSPL2Q05D32 466 aa11.52□□□□□ -0.57
TRAPPC13-209ENST00000508304 POLR3EQ9NVU0 708 aa11.52□□□□□ -0.57
TRAPPC13-209ENST00000508304 PDXDC2PQ6P474 469 aa11.5□□□□□ -0.57
TRAPPC13-209ENST00000508304 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.49□□□□□ -0.57
TRAPPC13-209ENST00000508304 PPP1R26Q5T8A7 1209 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC13-209ENST00000508304 Q6ZVU0 165 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms