RNA–Protein interactions for RNA: ENST00000508197.1

CAST-221, Transcript of calpastatin, humanhuman

TSL 3

Gene CAST, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-221ENST00000508197 FOXO3O43524 673 aa17.06■□□□□ 0.32
CAST-221ENST00000508197 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
CAST-221ENST00000508197 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
CAST-221ENST00000508197 ATN1P54259 1190 aaPredicted RBP17.04■□□□□ 0.32
CAST-221ENST00000508197 DEFB132Q7Z7B7 95 aa17.04■□□□□ 0.32
CAST-221ENST00000508197 SPHKAPQ2M3C7 1700 aa17.04■□□□□ 0.32
CAST-221ENST00000508197 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
CAST-221ENST00000508197 EP400Q96L91 3159 aa17.03■□□□□ 0.32
CAST-221ENST00000508197 TTLL13PA6NNM8 815 aa17.03■□□□□ 0.32
CAST-221ENST00000508197 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
CAST-221ENST00000508197 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.32
CAST-221ENST00000508197 COL22A1Q8NFW1 1626 aaPredicted RBP17.02■□□□□ 0.31
CAST-221ENST00000508197 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.31
CAST-221ENST00000508197 PXDNQ92626 1479 aa17.01■□□□□ 0.31
CAST-221ENST00000508197 NUTM2FA1L443 756 aa17■□□□□ 0.31
CAST-221ENST00000508197 PPARGC1BQ86YN6 1023 aaKnown RBP17■□□□□ 0.31
CAST-221ENST00000508197 UNC5CLQ8IV45 518 aa17■□□□□ 0.31
CAST-221ENST00000508197 HFM1A2PYH4 1435 aa16.99■□□□□ 0.31
CAST-221ENST00000508197 WAPLQ7Z5K2 1190 aa16.99■□□□□ 0.31
CAST-221ENST00000508197 TMEM106CQ9BVX2 250 aa16.99■□□□□ 0.31
CAST-221ENST00000508197 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
CAST-221ENST00000508197 BLMP54132 1417 aaPredicted RBP16.97■□□□□ 0.31
CAST-221ENST00000508197 SLC39A7Q92504 469 aa16.97■□□□□ 0.31
CAST-221ENST00000508197 RALGAPBQ86X10 1494 aa16.97■□□□□ 0.31
CAST-221ENST00000508197 SLIT2O94813 1529 aa16.96■□□□□ 0.31
CAST-221ENST00000508197 GLI3P10071 1580 aa16.96■□□□□ 0.31
CAST-221ENST00000508197 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
CAST-221ENST00000508197 SEPT12Q8IYM1 358 aa16.95■□□□□ 0.3
CAST-221ENST00000508197 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
CAST-221ENST00000508197 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
CAST-221ENST00000508197 C7P10643 843 aa16.93■□□□□ 0.3
CAST-221ENST00000508197 STK26Q9P289 416 aa16.93■□□□□ 0.3
CAST-221ENST00000508197 METRNQ9UJH8 293 aa16.93■□□□□ 0.3
CAST-221ENST00000508197 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
CAST-221ENST00000508197 NAIPQ13075 1403 aa16.93■□□□□ 0.3
CAST-221ENST00000508197 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
CAST-221ENST00000508197 CABLES1Q8TDN4 633 aa16.92■□□□□ 0.3
CAST-221ENST00000508197 LRPPRCP42704 1394 aaKnown RBP16.91■□□□□ 0.3
CAST-221ENST00000508197 VPS72Q15906 364 aa16.91■□□□□ 0.3
CAST-221ENST00000508197 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
CAST-221ENST00000508197 KRT28Q7Z3Y7 464 aa16.91■□□□□ 0.3
CAST-221ENST00000508197 CDC42BPGQ6DT37 1551 aa16.9■□□□□ 0.3
CAST-221ENST00000508197 LHX8Q68G74 356 aa16.9■□□□□ 0.3
CAST-221ENST00000508197 KIF1BO60333 1816 aa16.9■□□□□ 0.3
CAST-221ENST00000508197 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
CAST-221ENST00000508197 PSDA5PKW4 1024 aaPredicted RBP16.89■□□□□ 0.29
CAST-221ENST00000508197 PSEN1P49768 467 aa16.88■□□□□ 0.29
CAST-221ENST00000508197 PDAP1Q13442 181 aaKnown RBP16.88■□□□□ 0.29
CAST-221ENST00000508197 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
CAST-221ENST00000508197 ABCC11Q96J66 1382 aa16.88■□□□□ 0.29
CAST-221ENST00000508197 HRCP23327 699 aa16.87■□□□□ 0.29
CAST-221ENST00000508197 SF3B2Q13435 895 aaKnown RBP16.87■□□□□ 0.29
CAST-221ENST00000508197 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.87■□□□□ 0.29
CAST-221ENST00000508197 TECPR2O15040 1411 aa16.87■□□□□ 0.29
CAST-221ENST00000508197 BRWD3Q6RI45 1802 aa16.86■□□□□ 0.29
CAST-221ENST00000508197 FAM83GA6ND36 823 aa16.86■□□□□ 0.29
CAST-221ENST00000508197 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
CAST-221ENST00000508197 ECM2O94769 699 aaPredicted RBP16.84■□□□□ 0.29
CAST-221ENST00000508197 CCDC9Q9Y3X0 531 aaKnown RBP16.84■□□□□ 0.29
CAST-221ENST00000508197 PPLO60437 1756 aa16.84■□□□□ 0.29
CAST-221ENST00000508197 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
CAST-221ENST00000508197 USP32Q8NFA0 1604 aa16.82■□□□□ 0.28
CAST-221ENST00000508197 CCDC144AA2RUR9 1427 aa16.82■□□□□ 0.28
CAST-221ENST00000508197 RIOK3O14730 519 aaKnown RBP16.82■□□□□ 0.28
CAST-221ENST00000508197 IER5LQ5T953 404 aa16.82■□□□□ 0.28
CAST-221ENST00000508197 RRBP1Q9P2E9 1410 aaKnown RBP16.81■□□□□ 0.28
CAST-221ENST00000508197 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
CAST-221ENST00000508197 EN1Q05925 392 aaPredicted RBP16.81■□□□□ 0.28
CAST-221ENST00000508197 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
CAST-221ENST00000508197 LRP5O75197 1615 aa16.81■□□□□ 0.28
CAST-221ENST00000508197 BAG6P46379 1132 aa16.8■□□□□ 0.28
CAST-221ENST00000508197 PSME1Q06323 249 aa16.8■□□□□ 0.28
CAST-221ENST00000508197 FAM98CQ17RN3 349 aaKnown RBP16.8■□□□□ 0.28
CAST-221ENST00000508197 RNF25Q96BH1 459 aaPredicted RBP16.8■□□□□ 0.28
CAST-221ENST00000508197 SIRT1Q96EB6 747 aa16.8■□□□□ 0.28
CAST-221ENST00000508197 TNS3Q68CZ2 1445 aa16.79■□□□□ 0.28
CAST-221ENST00000508197 SPATA31E1Q6ZUB1 1445 aa16.79■□□□□ 0.28
CAST-221ENST00000508197 LMOD2Q6P5Q4 547 aa16.79■□□□□ 0.28
CAST-221ENST00000508197 SEC24BO95487 1268 aa16.78■□□□□ 0.28
CAST-221ENST00000508197 GOLGA2Q08379 1002 aa16.78■□□□□ 0.28
CAST-221ENST00000508197 YTHDC2Q9H6S0 1430 aaKnown RBP16.78■□□□□ 0.28
CAST-221ENST00000508197 SBNO1A3KN83 1393 aa16.77■□□□□ 0.28
CAST-221ENST00000508197 FMN2Q9NZ56 1722 aa16.77■□□□□ 0.28
CAST-221ENST00000508197 R3HDM1Q15032 1099 aaKnown RBP16.77■□□□□ 0.28
CAST-221ENST00000508197 ANKRD30BQ9BXX2 1392 aa16.77■□□□□ 0.27
CAST-221ENST00000508197 PMFBP1Q8TBY8 1022 aa16.76■□□□□ 0.27
CAST-221ENST00000508197 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
CAST-221ENST00000508197 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
CAST-221ENST00000508197 A0A0G2JS52 829 aa16.75■□□□□ 0.27
CAST-221ENST00000508197 MYT1Q01538 1121 aa16.75■□□□□ 0.27
CAST-221ENST00000508197 PIK3C2GO75747 1445 aa16.75■□□□□ 0.27
CAST-221ENST00000508197 SAFB2Q14151 953 aaKnown RBP eCLIP16.74■□□□□ 0.27
CAST-221ENST00000508197 CFAP70Q5T0N1 1121 aa16.74■□□□□ 0.27
CAST-221ENST00000508197 NRXN1Q9ULB1 1477 aa16.73■□□□□ 0.27
CAST-221ENST00000508197 KIF1AQ12756 1690 aa16.73■□□□□ 0.27
CAST-221ENST00000508197 EZH2Q15910 746 aaKnown RBP16.73■□□□□ 0.27
CAST-221ENST00000508197 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
CAST-221ENST00000508197 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
CAST-221ENST00000508197 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
CAST-221ENST00000508197 POTEB2H3BUK9 544 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms