RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 PER1O15534 1290 aaPredicted RBP28.6■■■□□ 2.17
HOXC9-203ENST00000508190 PIK3C2AO00443 1686 aa28.59■■■□□ 2.17
HOXC9-203ENST00000508190 ALS2Q96Q42 1657 aa28.59■■■□□ 2.17
HOXC9-203ENST00000508190 KRT28Q7Z3Y7 464 aa28.59■■■□□ 2.17
HOXC9-203ENST00000508190 ANKRD26Q9UPS8 1709 aa28.58■■■□□ 2.17
HOXC9-203ENST00000508190 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.58■■■□□ 2.17
HOXC9-203ENST00000508190 TTC21BQ7Z4L5 1316 aa28.56■■■□□ 2.16
HOXC9-203ENST00000508190 KNSTRNQ9Y448 316 aa28.56■■■□□ 2.16
HOXC9-203ENST00000508190 MARF1Q9Y4F3 1742 aaKnown RBP28.56■■■□□ 2.16
HOXC9-203ENST00000508190 PAK3O75914 559 aaPredicted RBP28.54■■■□□ 2.16
HOXC9-203ENST00000508190 COL16A1Q07092 1604 aaPredicted RBP28.54■■■□□ 2.16
HOXC9-203ENST00000508190 SOS2Q07890 1332 aaPredicted RBP28.54■■■□□ 2.16
HOXC9-203ENST00000508190 BRD4O60885 1362 aaPredicted RBP28.52■■■□□ 2.16
HOXC9-203ENST00000508190 CGNL1Q0VF96 1302 aa28.51■■■□□ 2.15
HOXC9-203ENST00000508190 CNGB1Q14028 1251 aaPredicted RBP28.51■■■□□ 2.15
HOXC9-203ENST00000508190 NME9Q86XW9 330 aa28.51■■■□□ 2.15
HOXC9-203ENST00000508190 AMER1Q5JTC6 1135 aaPredicted RBP28.5■■■□□ 2.15
HOXC9-203ENST00000508190 SBNO1A3KN83 1393 aa28.5■■■□□ 2.15
HOXC9-203ENST00000508190 USP54Q70EL1 1684 aa28.5■■■□□ 2.15
HOXC9-203ENST00000508190 TTC21AQ8NDW8 1320 aa28.5■■■□□ 2.15
HOXC9-203ENST00000508190 TNS3Q68CZ2 1445 aa28.49■■■□□ 2.15
HOXC9-203ENST00000508190 ZRANB1Q9UGI0 708 aa28.48■■■□□ 2.15
HOXC9-203ENST00000508190 FYB1O15117 783 aa28.48■■■□□ 2.15
HOXC9-203ENST00000508190 CC2D1BQ5T0F9 858 aaKnown RBP28.47■■■□□ 2.15
HOXC9-203ENST00000508190 GGNBP2Q9H3C7 697 aa28.47■■■□□ 2.15
HOXC9-203ENST00000508190 NUTM2GQ5VZR2 741 aa28.46■■■□□ 2.15
HOXC9-203ENST00000508190 DIEXFQ68CQ4 756 aaKnown RBP28.46■■■□□ 2.15
HOXC9-203ENST00000508190 SPATA31A3Q5VYP0 1347 aa28.46■■■□□ 2.15
HOXC9-203ENST00000508190 CRYBG1Q9Y4K1 1723 aa28.44■■■□□ 2.14
HOXC9-203ENST00000508190 LMOD2Q6P5Q4 547 aa28.44■■■□□ 2.14
HOXC9-203ENST00000508190 ABTB2Q8N961 1025 aa28.44■■■□□ 2.14
HOXC9-203ENST00000508190 NPC1L1Q9UHC9 1359 aa28.44■■■□□ 2.14
HOXC9-203ENST00000508190 NSD2O96028 1365 aa28.43■■■□□ 2.14
HOXC9-203ENST00000508190 OVOS2A0A0J9YW53 1432 aa28.43■■■□□ 2.14
HOXC9-203ENST00000508190 OVOS2Q6IE36 1432 aa28.43■■■□□ 2.14
HOXC9-203ENST00000508190 ABCA3Q99758 1704 aa28.41■■■□□ 2.14
HOXC9-203ENST00000508190 PHRF1Q9P1Y6 1649 aaKnown RBP28.41■■■□□ 2.14
HOXC9-203ENST00000508190 USP31Q70CQ4 1352 aa28.4■■■□□ 2.14
HOXC9-203ENST00000508190 NLRP6P59044 892 aa28.39■■■□□ 2.14
HOXC9-203ENST00000508190 MED1Q15648 1581 aaPredicted RBP28.39■■■□□ 2.14
HOXC9-203ENST00000508190 ARHGEF10O15013 1369 aa28.38■■■□□ 2.13
HOXC9-203ENST00000508190 MAP2P11137 1827 aaKnown RBP28.38■■■□□ 2.13
HOXC9-203ENST00000508190 COL22A1Q8NFW1 1626 aaPredicted RBP28.38■■■□□ 2.13
HOXC9-203ENST00000508190 PLEKHG5O94827 1062 aa28.38■■■□□ 2.13
HOXC9-203ENST00000508190 LRRC59Q96AG4 307 aaKnown RBP28.38■■■□□ 2.13
HOXC9-203ENST00000508190 COG3Q96JB2 828 aa28.37■■■□□ 2.13
HOXC9-203ENST00000508190 SHPRHQ149N8 1683 aa28.36■■■□□ 2.13
HOXC9-203ENST00000508190 HSPA1LP34931 641 aa28.36■■■□□ 2.13
HOXC9-203ENST00000508190 SLIT3O75094 1523 aa28.34■■■□□ 2.13
HOXC9-203ENST00000508190 PARD3Q8TEW0 1356 aa28.34■■■□□ 2.13
HOXC9-203ENST00000508190 MORC1Q86VD1 984 aa28.34■■■□□ 2.13
HOXC9-203ENST00000508190 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
HOXC9-203ENST00000508190 NLRP13Q86W25 1043 aa28.33■■■□□ 2.13
HOXC9-203ENST00000508190 LTN1O94822 1766 aa28.33■■■□□ 2.13
HOXC9-203ENST00000508190 USP19O94966 1318 aa28.32■■■□□ 2.12
HOXC9-203ENST00000508190 TNNT2P45379 298 aaPredicted RBP28.32■■■□□ 2.12
HOXC9-203ENST00000508190 PRKRIP1Q9H875 184 aaPredicted RBP28.32■■■□□ 2.12
HOXC9-203ENST00000508190 SOX12O15370 315 aa28.31■■■□□ 2.12
HOXC9-203ENST00000508190 CABLES1Q8TDN4 633 aa28.31■■■□□ 2.12
HOXC9-203ENST00000508190 FBXO41Q8TF61 875 aa28.31■■■□□ 2.12
HOXC9-203ENST00000508190 NFAT5O94916 1531 aa28.3■■■□□ 2.12
HOXC9-203ENST00000508190 ANP32CO43423 234 aa28.3■■■□□ 2.12
HOXC9-203ENST00000508190 FBLN1P23142 703 aa28.29■■■□□ 2.12
HOXC9-203ENST00000508190 RALBP1Q15311 655 aa28.26■■■□□ 2.11
HOXC9-203ENST00000508190 JCADQ9P266 1359 aa28.24■■■□□ 2.11
HOXC9-203ENST00000508190 PEAK1Q9H792 1746 aa28.23■■■□□ 2.11
HOXC9-203ENST00000508190 GCP02774 474 aa28.23■■■□□ 2.11
HOXC9-203ENST00000508190 AATKQ6ZMQ8 1374 aa28.21■■■□□ 2.11
HOXC9-203ENST00000508190 PPP2R1AP30153 589 aa28.21■■■□□ 2.11
HOXC9-203ENST00000508190 RRS1Q15050 365 aaKnown RBP28.21■■■□□ 2.11
HOXC9-203ENST00000508190 RGPD5Q99666 1765 aa28.21■■■□□ 2.11
HOXC9-203ENST00000508190 KCNH5Q8NCM2 988 aa28.2■■■□□ 2.1
HOXC9-203ENST00000508190 MYBBP1AQ9BQG0 1328 aaKnown RBP28.19■■■□□ 2.1
HOXC9-203ENST00000508190 HAP1P54257 671 aaPredicted RBP28.18■■■□□ 2.1
HOXC9-203ENST00000508190 MIER1Q8N108 512 aa28.18■■■□□ 2.1
HOXC9-203ENST00000508190 ZC3H6P61129 1189 aaKnown RBP28.17■■■□□ 2.1
HOXC9-203ENST00000508190 POLKQ9UBT6 870 aa28.17■■■□□ 2.1
HOXC9-203ENST00000508190 EMILIN1Q9Y6C2 1016 aa28.17■■■□□ 2.1
HOXC9-203ENST00000508190 COL18A1P39060 1754 aa28.17■■■□□ 2.1
HOXC9-203ENST00000508190 MAP3K19Q56UN5 1328 aa28.16■■■□□ 2.1
HOXC9-203ENST00000508190 SMG6Q86US8 1419 aaKnown RBP28.16■■■□□ 2.1
HOXC9-203ENST00000508190 ZBTB7CA1YPR0 619 aa28.15■■■□□ 2.1
HOXC9-203ENST00000508190 NUTM2BA6NNL0 878 aaPredicted RBP28.14■■■□□ 2.1
HOXC9-203ENST00000508190 NUTM2EB1AL46 878 aaPredicted RBP28.14■■■□□ 2.1
HOXC9-203ENST00000508190 NUTM2AQ8IVF1 878 aaPredicted RBP28.14■■■□□ 2.1
HOXC9-203ENST00000508190 KIAA0232Q92628 1395 aa28.13■■■□□ 2.09
HOXC9-203ENST00000508190 MTHFSP49914 203 aa28.13■■■□□ 2.09
HOXC9-203ENST00000508190 PPM1GO15355 546 aaPredicted RBP28.13■■■□□ 2.09
HOXC9-203ENST00000508190 ARHGEF25Q86VW2 580 aa28.13■■■□□ 2.09
HOXC9-203ENST00000508190 LRP6O75581 1613 aa28.12■■■□□ 2.09
HOXC9-203ENST00000508190 CPDO75976 1380 aa28.11■■■□□ 2.09
HOXC9-203ENST00000508190 SPATA31A6Q5VVP1 1343 aa28.1■■■□□ 2.09
HOXC9-203ENST00000508190 CDK12Q9NYV4 1490 aaPredicted RBP28.1■■■□□ 2.09
HOXC9-203ENST00000508190 PLCH1Q4KWH8 1693 aa28.1■■■□□ 2.09
HOXC9-203ENST00000508190 LMO7Q8WWI1 1683 aa28.1■■■□□ 2.09
HOXC9-203ENST00000508190 COL14A1Q05707 1796 aaKnown RBP28.09■■■□□ 2.09
HOXC9-203ENST00000508190 CHRNA2Q15822 529 aa28.08■■■□□ 2.09
HOXC9-203ENST00000508190 CCDC184Q52MB2 194 aa28.08■■■□□ 2.09
HOXC9-203ENST00000508190 ADAMTS2O95450 1211 aa28.08■■■□□ 2.08
HOXC9-203ENST00000508190 AMPHP49418 695 aa28.08■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms