RNA–Protein interactions for RNA: ENST00000507458.2

SMN2-207, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-207ENST00000507458 LYPD8Q6UX82 237 aa11.35□□□□□ -0.59
SMN2-207ENST00000507458 CFAP99D6REC4 459 aa11.34□□□□□ -0.59
SMN2-207ENST00000507458 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
SMN2-207ENST00000507458 BAP1Q92560 729 aa11.34□□□□□ -0.59
SMN2-207ENST00000507458 SIAH2O43255 324 aa11.33□□□□□ -0.6
SMN2-207ENST00000507458 CABLES1Q8TDN4 633 aa11.33□□□□□ -0.6
SMN2-207ENST00000507458 WASF2Q9Y6W5 498 aa11.33□□□□□ -0.6
SMN2-207ENST00000507458 NUTM2BA6NNL0 878 aaPredicted RBP11.32□□□□□ -0.6
SMN2-207ENST00000507458 NUTM2EB1AL46 878 aaPredicted RBP11.32□□□□□ -0.6
SMN2-207ENST00000507458 NUTM2DQ5VT03 806 aaPredicted RBP11.32□□□□□ -0.6
SMN2-207ENST00000507458 NUTM2AQ8IVF1 878 aaPredicted RBP11.32□□□□□ -0.6
SMN2-207ENST00000507458 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
SMN2-207ENST00000507458 KDM4CQ9H3R0 1056 aa11.32□□□□□ -0.6
SMN2-207ENST00000507458 ATP13A2Q9NQ11 1180 aa11.32□□□□□ -0.6
SMN2-207ENST00000507458 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
SMN2-207ENST00000507458 LIMD1Q9UGP4 676 aa11.31□□□□□ -0.6
SMN2-207ENST00000507458 TUSC1Q2TAM9 212 aa11.3□□□□□ -0.6
SMN2-207ENST00000507458 TSC1Q92574 1164 aa11.3□□□□□ -0.6
SMN2-207ENST00000507458 DDRGK1Q96HY6 314 aa11.3□□□□□ -0.6
SMN2-207ENST00000507458 MYO15BQ96JP2 1530 aa11.3□□□□□ -0.6
SMN2-207ENST00000507458 VARSP26640 1264 aaKnown RBP11.29□□□□□ -0.6
SMN2-207ENST00000507458 RSPH6AQ9H0K4 717 aa11.29□□□□□ -0.6
SMN2-207ENST00000507458 SENP2Q9HC62 589 aa11.29□□□□□ -0.6
SMN2-207ENST00000507458 PLEKHG3A1L390 1219 aa11.27□□□□□ -0.61
SMN2-207ENST00000507458 CLK2P49760 499 aaKnown RBP11.27□□□□□ -0.61
SMN2-207ENST00000507458 QPCTQ16769 361 aa11.27□□□□□ -0.61
SMN2-207ENST00000507458 GPBP1L1Q9HC44 474 aaPredicted RBP11.27□□□□□ -0.61
SMN2-207ENST00000507458 MAP10Q9P2G4 905 aa11.27□□□□□ -0.61
SMN2-207ENST00000507458 LILRB3O75022 631 aa11.26□□□□□ -0.61
SMN2-207ENST00000507458 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
SMN2-207ENST00000507458 TLL2Q9Y6L7 1015 aa11.26□□□□□ -0.61
SMN2-207ENST00000507458 BICRAQ9NZM4 1560 aa11.25□□□□□ -0.61
SMN2-207ENST00000507458 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
SMN2-207ENST00000507458 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
SMN2-207ENST00000507458 FAM174AQ8TBP5 190 aa11.24□□□□□ -0.61
SMN2-207ENST00000507458 KIFC2Q96AC6 838 aa11.24□□□□□ -0.61
SMN2-207ENST00000507458 TRIM47Q96LD4 638 aa11.24□□□□□ -0.61
SMN2-207ENST00000507458 CAPN5O15484 640 aaPredicted RBP11.23□□□□□ -0.61
SMN2-207ENST00000507458 TREML4Q6UXN2 200 aa11.23□□□□□ -0.61
SMN2-207ENST00000507458 MPNDQ8N594 471 aa11.23□□□□□ -0.61
SMN2-207ENST00000507458 POLR3EQ9NVU0 708 aa11.23□□□□□ -0.61
SMN2-207ENST00000507458 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
SMN2-207ENST00000507458 AGERQ15109 404 aa11.21□□□□□ -0.61
SMN2-207ENST00000507458 ARMC2Q8NEN0 867 aa11.21□□□□□ -0.61
SMN2-207ENST00000507458 RTL5Q5HYW3 569 aaPredicted RBP11.2□□□□□ -0.62
SMN2-207ENST00000507458 FOXJ1Q92949 421 aa11.2□□□□□ -0.62
SMN2-207ENST00000507458 NNTQ13423 1086 aa11.19□□□□□ -0.62
SMN2-207ENST00000507458 BPHLQ86WA6 291 aaPredicted RBP11.19□□□□□ -0.62
SMN2-207ENST00000507458 BMP1P13497 986 aa11.18□□□□□ -0.62
SMN2-207ENST00000507458 TMEM132AQ24JP5 1023 aa11.18□□□□□ -0.62
SMN2-207ENST00000507458 WFS1O76024 890 aa11.17□□□□□ -0.62
SMN2-207ENST00000507458 NBPF14Q5TI25 921 aa11.17□□□□□ -0.62
SMN2-207ENST00000507458 ADH1CP00326 375 aa11.16□□□□□ -0.62
SMN2-207ENST00000507458 ARID5BQ14865 1188 aa11.16□□□□□ -0.62
SMN2-207ENST00000507458 FAM117AQ9C073 453 aa11.16□□□□□ -0.62
SMN2-207ENST00000507458 GOPCQ9HD26 462 aa11.16□□□□□ -0.62
SMN2-207ENST00000507458 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
SMN2-207ENST00000507458 CDK15Q96Q40 435 aa11.15□□□□□ -0.62
SMN2-207ENST00000507458 ATP1B4Q9UN42 357 aaPredicted RBP11.15□□□□□ -0.62
SMN2-207ENST00000507458 SKIV2LQ15477 1246 aaKnown RBP11.14□□□□□ -0.63
SMN2-207ENST00000507458 LCE2AQ5TA79 106 aaPredicted RBP11.14□□□□□ -0.63
SMN2-207ENST00000507458 ZCCHC6Q5VYS8 1495 aaKnown RBP11.13□□□□□ -0.63
SMN2-207ENST00000507458 WDR4P57081 412 aaKnown RBP11.13□□□□□ -0.63
SMN2-207ENST00000507458 SH3D19Q5HYK7 790 aa11.13□□□□□ -0.63
SMN2-207ENST00000507458 NFX1Q12986 1120 aaKnown RBP11.12□□□□□ -0.63
SMN2-207ENST00000507458 C4orf48Q5BLP8 95 aa11.12□□□□□ -0.63
SMN2-207ENST00000507458 IL27Q8NEV9 243 aa11.12□□□□□ -0.63
SMN2-207ENST00000507458 DCAF1Q9Y4B6 1507 aa11.11□□□□□ -0.63
SMN2-207ENST00000507458 TIMP2P16035 220 aa11.11□□□□□ -0.63
SMN2-207ENST00000507458 CTDSPL2Q05D32 466 aa11.11□□□□□ -0.63
SMN2-207ENST00000507458 NR5A1Q13285 461 aa11.11□□□□□ -0.63
SMN2-207ENST00000507458 TERTO14746 1132 aaKnown RBP11.1□□□□□ -0.63
SMN2-207ENST00000507458 GPKOWQ92917 476 aaPredicted RBP eCLIP11.1□□□□□ -0.63
SMN2-207ENST00000507458 MAGEB6P1A0A0J9YX57 407 aa11.09□□□□□ -0.63
SMN2-207ENST00000507458 SCARF1Q14162 830 aa11.09□□□□□ -0.63
SMN2-207ENST00000507458 SH3RF1Q7Z6J0 888 aa11.09□□□□□ -0.63
SMN2-207ENST00000507458 C1QTNF2Q9BXJ5 285 aa11.09□□□□□ -0.63
SMN2-207ENST00000507458 MRPL14Q6P1L8 145 aaKnown RBP11.08□□□□□ -0.64
SMN2-207ENST00000507458 SH3BP5LQ7L8J4 393 aa11.08□□□□□ -0.64
SMN2-207ENST00000507458 ZFP42Q96MM3 310 aa11.08□□□□□ -0.64
SMN2-207ENST00000507458 PROCA1Q8NCQ7 364 aaPredicted RBP11.07□□□□□ -0.64
SMN2-207ENST00000507458 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMN2-207ENST00000507458 KLF16Q9BXK1 252 aaPredicted RBP11.07□□□□□ -0.64
SMN2-207ENST00000507458 ZIC2O95409 532 aaPredicted RBP11.06□□□□□ -0.64
SMN2-207ENST00000507458 NR3C2P08235 984 aa11.06□□□□□ -0.64
SMN2-207ENST00000507458 GRM5P41594 1212 aa11.06□□□□□ -0.64
SMN2-207ENST00000507458 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
SMN2-207ENST00000507458 MAP4K5Q9Y4K4 846 aa11.06□□□□□ -0.64
SMN2-207ENST00000507458 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
SMN2-207ENST00000507458 PPP2R2DQ66LE6 453 aa11.05□□□□□ -0.64
SMN2-207ENST00000507458 VASH1Q7L8A9 365 aaPredicted RBP11.05□□□□□ -0.64
SMN2-207ENST00000507458 TRMT44Q8IYL2 757 aaKnown RBP11.05□□□□□ -0.64
SMN2-207ENST00000507458 LRRN4Q8WUT4 740 aa11.05□□□□□ -0.64
SMN2-207ENST00000507458 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
SMN2-207ENST00000507458 FSHRP23945 695 aa11.04□□□□□ -0.64
SMN2-207ENST00000507458 SLC16A10Q8TF71 515 aa11.04□□□□□ -0.64
SMN2-207ENST00000507458 ITPKCQ96DU7 683 aa11.04□□□□□ -0.64
SMN2-207ENST00000507458 PURBQ96QR8 312 aaKnown RBP11.04□□□□□ -0.64
SMN2-207ENST00000507458 ZFAND3Q9H8U3 227 aa11.04□□□□□ -0.64
SMN2-207ENST00000507458 NXF1Q9UBU9 619 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms