RNA–Protein interactions for RNA: ENST00000507342.5

PPARGC1A-205, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 3

Gene PPARGC1A, Length 359 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-205ENST00000507342 SSH2Q76I76 1423 aa16.54■□□□□ 0.24
PPARGC1A-205ENST00000507342 LRRC59Q96AG4 307 aaKnown RBP16.54■□□□□ 0.24
PPARGC1A-205ENST00000507342 USP6P35125 1406 aa16.53■□□□□ 0.24
PPARGC1A-205ENST00000507342 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
PPARGC1A-205ENST00000507342 PUS7Q96PZ0 661 aaKnown RBP16.53■□□□□ 0.24
PPARGC1A-205ENST00000507342 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
PPARGC1A-205ENST00000507342 PIK3C2AO00443 1686 aa16.53■□□□□ 0.24
PPARGC1A-205ENST00000507342 PHRF1Q9P1Y6 1649 aaKnown RBP16.52■□□□□ 0.24
PPARGC1A-205ENST00000507342 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
PPARGC1A-205ENST00000507342 NGDNQ8NEJ9 315 aaKnown RBP16.52■□□□□ 0.24
PPARGC1A-205ENST00000507342 CABP1Q9NZU7 370 aa16.52■□□□□ 0.24
PPARGC1A-205ENST00000507342 TMF1P82094 1093 aa16.5■□□□□ 0.23
PPARGC1A-205ENST00000507342 USP54Q70EL1 1684 aa16.5■□□□□ 0.23
PPARGC1A-205ENST00000507342 PSME1Q06323 249 aa16.49■□□□□ 0.23
PPARGC1A-205ENST00000507342 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
PPARGC1A-205ENST00000507342 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
PPARGC1A-205ENST00000507342 NINLQ9Y2I6 1382 aa16.49■□□□□ 0.23
PPARGC1A-205ENST00000507342 SLC24A1O60721 1099 aa16.48■□□□□ 0.23
PPARGC1A-205ENST00000507342 A0A1W2PP64 1363 aa16.48■□□□□ 0.23
PPARGC1A-205ENST00000507342 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
PPARGC1A-205ENST00000507342 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
PPARGC1A-205ENST00000507342 SLIT3O75094 1523 aa16.45■□□□□ 0.22
PPARGC1A-205ENST00000507342 KTN1Q86UP2 1357 aaKnown RBP16.44■□□□□ 0.22
PPARGC1A-205ENST00000507342 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
PPARGC1A-205ENST00000507342 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
PPARGC1A-205ENST00000507342 EDC4Q6P2E9 1401 aaKnown RBP16.44■□□□□ 0.22
PPARGC1A-205ENST00000507342 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
PPARGC1A-205ENST00000507342 USP19O94966 1318 aa16.43■□□□□ 0.22
PPARGC1A-205ENST00000507342 NUTM2BA6NNL0 878 aaPredicted RBP16.42■□□□□ 0.22
PPARGC1A-205ENST00000507342 NUTM2EB1AL46 878 aaPredicted RBP16.42■□□□□ 0.22
PPARGC1A-205ENST00000507342 CDCA8Q53HL2 280 aa16.42■□□□□ 0.22
PPARGC1A-205ENST00000507342 NUTM2AQ8IVF1 878 aaPredicted RBP16.42■□□□□ 0.22
PPARGC1A-205ENST00000507342 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
PPARGC1A-205ENST00000507342 TTC21BQ7Z4L5 1316 aa16.42■□□□□ 0.22
PPARGC1A-205ENST00000507342 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
PPARGC1A-205ENST00000507342 CABLES1Q8TDN4 633 aa16.41■□□□□ 0.22
PPARGC1A-205ENST00000507342 ZNF692Q9BU19 519 aaPredicted RBP16.41■□□□□ 0.22
PPARGC1A-205ENST00000507342 KIF20BQ96Q89 1820 aa16.4■□□□□ 0.22
PPARGC1A-205ENST00000507342 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
PPARGC1A-205ENST00000507342 NRAPQ86VF7 1730 aa16.39■□□□□ 0.21
PPARGC1A-205ENST00000507342 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.39■□□□□ 0.21
PPARGC1A-205ENST00000507342 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
PPARGC1A-205ENST00000507342 KIF7Q2M1P5 1343 aa16.39■□□□□ 0.21
PPARGC1A-205ENST00000507342 TTC21AQ8NDW8 1320 aa16.39■□□□□ 0.21
PPARGC1A-205ENST00000507342 NFAT5O94916 1531 aa16.39■□□□□ 0.21
PPARGC1A-205ENST00000507342 OVOS2A0A0J9YW53 1432 aa16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 OVOS2Q6IE36 1432 aa16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 NUTM2GQ5VZR2 741 aa16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 SLIT2O94813 1529 aa16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 USP31Q70CQ4 1352 aa16.38■□□□□ 0.21
PPARGC1A-205ENST00000507342 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
PPARGC1A-205ENST00000507342 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
PPARGC1A-205ENST00000507342 ADAMTS2O95450 1211 aa16.37■□□□□ 0.21
PPARGC1A-205ENST00000507342 PLEKHG5O94827 1062 aa16.36■□□□□ 0.21
PPARGC1A-205ENST00000507342 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
PPARGC1A-205ENST00000507342 CCDC7Q96M83 1385 aa16.36■□□□□ 0.21
PPARGC1A-205ENST00000507342 NME9Q86XW9 330 aa16.35■□□□□ 0.21
PPARGC1A-205ENST00000507342 ZRANB1Q9UGI0 708 aa16.35■□□□□ 0.21
PPARGC1A-205ENST00000507342 NSD3Q9BZ95 1437 aa16.35■□□□□ 0.21
PPARGC1A-205ENST00000507342 ANKRD26Q9UPS8 1709 aa16.34■□□□□ 0.21
PPARGC1A-205ENST00000507342 COL18A1P39060 1754 aa16.34■□□□□ 0.21
PPARGC1A-205ENST00000507342 MEX3CQ5U5Q3 659 aaKnown RBP16.34■□□□□ 0.21
PPARGC1A-205ENST00000507342 CARD14Q9BXL6 1004 aa16.34■□□□□ 0.21
PPARGC1A-205ENST00000507342 AFF2P51816 1311 aa16.34■□□□□ 0.21
PPARGC1A-205ENST00000507342 BCL9LQ86UU0 1499 aa16.34■□□□□ 0.21
PPARGC1A-205ENST00000507342 NLRP13Q86W25 1043 aa16.33■□□□□ 0.2
PPARGC1A-205ENST00000507342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.33■□□□□ 0.26e-11■■■□□ 18.1
PPARGC1A-205ENST00000507342 C8orf37Q96NL8 207 aa16.33■□□□□ 0.2
PPARGC1A-205ENST00000507342 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
PPARGC1A-205ENST00000507342 CPDO75976 1380 aa16.32■□□□□ 0.2
PPARGC1A-205ENST00000507342 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
PPARGC1A-205ENST00000507342 KIAA0232Q92628 1395 aa16.32■□□□□ 0.2
PPARGC1A-205ENST00000507342 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
PPARGC1A-205ENST00000507342 LTN1O94822 1766 aa16.31■□□□□ 0.2
PPARGC1A-205ENST00000507342 NLRP6P59044 892 aa16.31■□□□□ 0.2
PPARGC1A-205ENST00000507342 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
PPARGC1A-205ENST00000507342 ATRNO75882 1429 aa16.3■□□□□ 0.2
PPARGC1A-205ENST00000507342 HAP1P54257 671 aaPredicted RBP16.3■□□□□ 0.2
PPARGC1A-205ENST00000507342 GCP02774 474 aa16.29■□□□□ 0.2
PPARGC1A-205ENST00000507342 POTEAQ6S8J7 498 aa16.29■□□□□ 0.2
PPARGC1A-205ENST00000507342 CAMTA1Q9Y6Y1 1673 aa16.29■□□□□ 0.2
PPARGC1A-205ENST00000507342 ABCC6O95255 1503 aa16.29■□□□□ 0.2
PPARGC1A-205ENST00000507342 FAM83GA6ND36 823 aa16.28■□□□□ 0.2
PPARGC1A-205ENST00000507342 NGLY1Q96IV0 654 aa16.28■□□□□ 0.2
PPARGC1A-205ENST00000507342 GLI3P10071 1580 aa16.28■□□□□ 0.2
PPARGC1A-205ENST00000507342 FYB1O15117 783 aa16.27■□□□□ 0.2
PPARGC1A-205ENST00000507342 ZC3H6P61129 1189 aaKnown RBP16.27■□□□□ 0.2
PPARGC1A-205ENST00000507342 RGPD5Q99666 1765 aa16.27■□□□□ 0.2
PPARGC1A-205ENST00000507342 PANK3Q9H999 370 aa16.26■□□□□ 0.19
PPARGC1A-205ENST00000507342 PRDM11Q9NQV5 511 aa16.26■□□□□ 0.19
PPARGC1A-205ENST00000507342 CHRNA2Q15822 529 aa16.25■□□□□ 0.19
PPARGC1A-205ENST00000507342 ZNF772Q68DY9 489 aaPredicted RBP16.25■□□□□ 0.19
PPARGC1A-205ENST00000507342 USP21Q9UK80 565 aa16.25■□□□□ 0.19
PPARGC1A-205ENST00000507342 PEAK1Q9H792 1746 aa16.25■□□□□ 0.19
PPARGC1A-205ENST00000507342 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
PPARGC1A-205ENST00000507342 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
PPARGC1A-205ENST00000507342 GGNBP2Q9H3C7 697 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms