RNA–Protein interactions for RNA: ENST00000507316.1

TUSC3-205, Transcript of tumor suppressor candidate 3, human

TSL 3

Gene TUSC3, Length 573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-205	ENST00000507316	COL25A1	Q9BXS0	654 aa	Predicted RBP	7.7	□□□□□ -1.18
TUSC3-205	ENST00000507316	TPRN	Q4KMQ1	711 aa		7.69	□□□□□ -1.18
TUSC3-205	ENST00000507316	RDH13	Q8NBN7	331 aa		7.69	□□□□□ -1.18
TUSC3-205	ENST00000507316	ANP32E	Q9BTT0	268 aa		7.69	□□□□□ -1.18
TUSC3-205	ENST00000507316	GPR37	O15354	613 aa		7.68	□□□□□ -1.18
TUSC3-205	ENST00000507316	MAN1A2	O60476	641 aa		7.68	□□□□□ -1.18
TUSC3-205	ENST00000507316	RANGAP1	P46060	587 aa	Predicted RBP	7.68	□□□□□ -1.18
TUSC3-205	ENST00000507316	WNT7B	P56706	349 aa		7.68	□□□□□ -1.18
TUSC3-205	ENST00000507316	SLC27A5	Q9Y2P5	690 aa		7.68	□□□□□ -1.18
TUSC3-205	ENST00000507316	ACIN1	Q9UKV3	1341 aa	Known RBP	7.68	□□□□□ -1.18
TUSC3-205	ENST00000507316	MSS51	Q4VC12	460 aa		7.67	□□□□□ -1.18
TUSC3-205	ENST00000507316	KRTAP19-1	Q8IUB9	90 aa		7.67	□□□□□ -1.18
TUSC3-205	ENST00000507316	NLRP7	Q8WX94	980 aa		7.67	□□□□□ -1.18
TUSC3-205	ENST00000507316	DDX11L8	A8MPP1	907 aa		7.66	□□□□□ -1.18
TUSC3-205	ENST00000507316	SIAH2	O43255	324 aa		7.66	□□□□□ -1.18
TUSC3-205	ENST00000507316	BRICD5	Q6PL45	260 aa		7.66	□□□□□ -1.18
TUSC3-205	ENST00000507316	CLSPN	Q9HAW4	1339 aa		7.66	□□□□□ -1.18
TUSC3-205	ENST00000507316	UBE2Q2	Q8WVN8	375 aa		7.65	□□□□□ -1.18
TUSC3-205	ENST00000507316	SLURP2	P0DP57	97 aa		7.64	□□□□□ -1.19
TUSC3-205	ENST00000507316	BAG6	P46379	1132 aa		7.64	□□□□□ -1.19
TUSC3-205	ENST00000507316	RNFT1	Q5M7Z0	435 aa		7.64	□□□□□ -1.19
TUSC3-205	ENST00000507316	ARX	Q96QS3	562 aa		7.64	□□□□□ -1.19
TUSC3-205	ENST00000507316	SALL2	Q9Y467	1007 aa	Predicted RBP	7.64	□□□□□ -1.19
TUSC3-205	ENST00000507316	FURIN	P09958	794 aa		7.63	□□□□□ -1.19
TUSC3-205	ENST00000507316	FUT2	Q10981	343 aa		7.63	□□□□□ -1.19
TUSC3-205	ENST00000507316	ATP6V1A	P38606	617 aa		7.62	□□□□□ -1.19
TUSC3-205	ENST00000507316	MAP2K5	Q13163	448 aa		7.62	□□□□□ -1.19
TUSC3-205	ENST00000507316	RNF19B	Q6ZMZ0	732 aa		7.62	□□□□□ -1.19
TUSC3-205	ENST00000507316	SULF1	Q8IWU6	871 aa		7.62	□□□□□ -1.19
TUSC3-205	ENST00000507316	CCDC24	Q8N4L8	307 aa		7.62	□□□□□ -1.19
TUSC3-205	ENST00000507316	EHBP1	Q8NDI1	1231 aa		7.62	□□□□□ -1.19
TUSC3-205	ENST00000507316	MMP16	P51512	607 aa		7.6	□□□□□ -1.19
TUSC3-205	ENST00000507316	PHOX2B	Q99453	314 aa		7.6	□□□□□ -1.19
TUSC3-205	ENST00000507316	KRI1	Q8N9T8	703 aa	Known RBP	7.59	□□□□□ -1.19
TUSC3-205	ENST00000507316	CNTNAP5	Q8WYK1	1306 aa		7.58	□□□□□ -1.2
TUSC3-205	ENST00000507316	IRF6	O14896	467 aa		7.58	□□□□□ -1.2
TUSC3-205	ENST00000507316	ERICH6B	Q5W0A0	696 aa		7.58	□□□□□ -1.2
TUSC3-205	ENST00000507316	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
TUSC3-205	ENST00000507316	MINK1	Q8N4C8	1332 aa	Predicted RBP	7.57	□□□□□ -1.2
TUSC3-205	ENST00000507316	PHF20L1	A8MW92	1017 aa		7.57	□□□□□ -1.2
TUSC3-205	ENST00000507316	MDM2	Q00987	491 aa	Predicted RBP	7.57	□□□□□ -1.2
TUSC3-205	ENST00000507316	LCE1D	Q5T752	114 aa		7.57	□□□□□ -1.2
TUSC3-205	ENST00000507316	C6orf118	Q5T5N4	469 aa		7.56	□□□□□ -1.2
TUSC3-205	ENST00000507316	LYPD4	Q6UWN0	246 aa		7.56	□□□□□ -1.2
TUSC3-205	ENST00000507316	CCDC102A	Q96A19	550 aa		7.56	□□□□□ -1.2
TUSC3-205	ENST00000507316	GOLGA2P5	Q9HBQ8	144 aa		7.56	□□□□□ -1.2
TUSC3-205	ENST00000507316	GCGR	P47871	477 aa		7.55	□□□□□ -1.2
TUSC3-205	ENST00000507316	MAP3K10	Q02779	954 aa		7.55	□□□□□ -1.2
TUSC3-205	ENST00000507316	TIMP2	P16035	220 aa		7.54	□□□□□ -1.2
TUSC3-205	ENST00000507316	GRIPAP1	Q4V328	841 aa		7.54	□□□□□ -1.2
TUSC3-205	ENST00000507316	WDR4	P57081	412 aa	Known RBP	7.53	□□□□□ -1.2
TUSC3-205	ENST00000507316	NNT	Q13423	1086 aa		7.53	□□□□□ -1.2
TUSC3-205	ENST00000507316	NANOS1	Q8WY41	292 aa	Known RBP	7.52	□□□□□ -1.21
TUSC3-205	ENST00000507316	CCDC180	Q9P1Z9	1646 aa		7.52	□□□□□ -1.21
TUSC3-205	ENST00000507316	DXO	O77932	396 aa	Known RBP	7.51	□□□□□ -1.21
TUSC3-205	ENST00000507316	CLCN1	P35523	988 aa		7.51	□□□□□ -1.21
TUSC3-205	ENST00000507316	GPCPD1	Q9NPB8	672 aa		7.51	□□□□□ -1.21
TUSC3-205	ENST00000507316	CD46	P15529	392 aa		7.5	□□□□□ -1.21
TUSC3-205	ENST00000507316	DNMT3L	Q9UJW3	386 aa		7.5	□□□□□ -1.21
TUSC3-205	ENST00000507316	GTF3C3	Q9Y5Q9	886 aa		7.5	□□□□□ -1.21
TUSC3-205	ENST00000507316	KDM4A	O75164	1064 aa		7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	ADAMTS2	O95450	1211 aa		7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	ADH1C	P00326	375 aa		7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	TTLL12	Q14166	644 aa	Predicted RBP	7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	BEND7	Q8N7W2	519 aa	Predicted RBP	7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	ZC3H15	Q8WU90	426 aa	Known RBP	7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	ENAM	Q9NRM1	1142 aa		7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	TLL2	Q9Y6L7	1015 aa		7.49	□□□□□ -1.21
TUSC3-205	ENST00000507316	CELA2B	P08218	269 aa	Predicted RBP	7.48	□□□□□ -1.21
TUSC3-205	ENST00000507316		Q3C1V9	767 aa		7.47	□□□□□ -1.21
TUSC3-205	ENST00000507316	NUTM1	Q86Y26	1132 aa		7.47	□□□□□ -1.21
TUSC3-205	ENST00000507316	DCAF1	Q9Y4B6	1507 aa		7.47	□□□□□ -1.21
TUSC3-205	ENST00000507316	BMP2	P12643	396 aa		7.46	□□□□□ -1.22
TUSC3-205	ENST00000507316	PTS	Q03393	145 aa		7.46	□□□□□ -1.22
TUSC3-205	ENST00000507316	ZMYM1	Q5SVZ6	1142 aa		7.46	□□□□□ -1.22
TUSC3-205	ENST00000507316	BARGIN	Q6ZT62	677 aa		7.46	□□□□□ -1.22
TUSC3-205	ENST00000507316	PODN	Q7Z5L7	613 aa		7.46	□□□□□ -1.22
TUSC3-205	ENST00000507316	VWA5B2	Q8N398	1253 aa		7.46	□□□□□ -1.22
TUSC3-205	ENST00000507316	ZMYND10	O75800	440 aa		7.45	□□□□□ -1.22
TUSC3-205	ENST00000507316	NEFL	P07196	543 aa		7.45	□□□□□ -1.22
TUSC3-205	ENST00000507316	USB1	Q9BQ65	265 aa	Known RBP	7.45	□□□□□ -1.22
TUSC3-205	ENST00000507316	KLF16	Q9BXK1	252 aa	Predicted RBP	7.45	□□□□□ -1.22
TUSC3-205	ENST00000507316	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.45	□□□□□ -1.22
TUSC3-205	ENST00000507316	SOS2	Q07890	1332 aa	Predicted RBP	7.45	□□□□□ -1.22
TUSC3-205	ENST00000507316	PLEKHG3	A1L390	1219 aa		7.44	□□□□□ -1.22
TUSC3-205	ENST00000507316	ITGB7	P26010	798 aa		7.44	□□□□□ -1.22
TUSC3-205	ENST00000507316	USP46	P62068	366 aa		7.44	□□□□□ -1.22
TUSC3-205	ENST00000507316	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.44	□□□□□ -1.22
TUSC3-205	ENST00000507316	KRBA1	A5PL33	1030 aa		7.43	□□□□□ -1.22
TUSC3-205	ENST00000507316	SSTR3	P32745	418 aa	Predicted RBP	7.43	□□□□□ -1.22
TUSC3-205	ENST00000507316	SH3BP2	P78314	561 aa		7.43	□□□□□ -1.22
TUSC3-205	ENST00000507316	HLA-C	Q95604	372 aa		7.43	□□□□□ -1.22
TUSC3-205	ENST00000507316	ZFAND3	Q9H8U3	227 aa		7.43	□□□□□ -1.22
TUSC3-205	ENST00000507316	PODXL2	Q9NZ53	605 aa		7.43	□□□□□ -1.22
TUSC3-205	ENST00000507316	CDC14C	A4D256	554 aa		7.42	□□□□□ -1.22
TUSC3-205	ENST00000507316	HOXA2	O43364	376 aa		7.42	□□□□□ -1.22
TUSC3-205	ENST00000507316	GUCA2A	Q02747	115 aa		7.42	□□□□□ -1.22
TUSC3-205	ENST00000507316	PTCRA	Q6ISU1	281 aa	Predicted RBP	7.42	□□□□□ -1.22
TUSC3-205	ENST00000507316	SV2A	Q7L0J3	742 aa		7.42	□□□□□ -1.22
TUSC3-205	ENST00000507316	CCDC155	Q8N6L0	562 aa		7.42	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms