RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 SKIV2LQ15477 1246 aaKnown RBP9.11□□□□□ -0.95
CALCOCO2-208ENST00000506971 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
CALCOCO2-208ENST00000506971 J3QL48 77 aa9.1□□□□□ -0.95
CALCOCO2-208ENST00000506971 ST8SIA5O15466 376 aa9.1□□□□□ -0.95
CALCOCO2-208ENST00000506971 MYT1Q01538 1121 aa9.1□□□□□ -0.95
CALCOCO2-208ENST00000506971 LCE2BO14633 110 aa9.09□□□□□ -0.95
CALCOCO2-208ENST00000506971 SH3BP2P78314 561 aa9.09□□□□□ -0.95
CALCOCO2-208ENST00000506971 ZNF787Q6DD87 383 aa9.09□□□□□ -0.95
CALCOCO2-208ENST00000506971 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
CALCOCO2-208ENST00000506971 PLEKHG3A1L390 1219 aa9.08□□□□□ -0.96
CALCOCO2-208ENST00000506971 AP1G2O75843 785 aa9.08□□□□□ -0.96
CALCOCO2-208ENST00000506971 SH3D19Q5HYK7 790 aa9.08□□□□□ -0.96
CALCOCO2-208ENST00000506971 WASF2Q9Y6W5 498 aa9.08□□□□□ -0.96
CALCOCO2-208ENST00000506971 ARID5BQ14865 1188 aa9.07□□□□□ -0.96
CALCOCO2-208ENST00000506971 AXIN1O15169 862 aa9.06□□□□□ -0.96
CALCOCO2-208ENST00000506971 CTDSPL2Q05D32 466 aa9.06□□□□□ -0.96
CALCOCO2-208ENST00000506971 TUSC1Q2TAM9 212 aa9.06□□□□□ -0.96
CALCOCO2-208ENST00000506971 ZNF511Q8NB15 262 aa9.06□□□□□ -0.96
CALCOCO2-208ENST00000506971 PCMTD1Q96MG8 357 aaPredicted RBP9.06□□□□□ -0.96
CALCOCO2-208ENST00000506971 PRKCSHP14314 528 aaPredicted RBP9.04□□□□□ -0.96
CALCOCO2-208ENST00000506971 SMPD1P17405 629 aa9.04□□□□□ -0.96
CALCOCO2-208ENST00000506971 BRPF1P55201 1214 aaPredicted RBP9.04□□□□□ -0.96
CALCOCO2-208ENST00000506971 LRRN4Q8WUT4 740 aa9.03□□□□□ -0.96
CALCOCO2-208ENST00000506971 HPS1Q92902 700 aa9.03□□□□□ -0.96
CALCOCO2-208ENST00000506971 FOXJ1Q92949 421 aa9.03□□□□□ -0.96
CALCOCO2-208ENST00000506971 AAASQ9NRG9 546 aa9.03□□□□□ -0.96
CALCOCO2-208ENST00000506971 TLL2Q9Y6L7 1015 aa9.03□□□□□ -0.96
CALCOCO2-208ENST00000506971 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.97
CALCOCO2-208ENST00000506971 F12P00748 615 aaPredicted RBP9.02□□□□□ -0.97
CALCOCO2-208ENST00000506971 CARD14Q9BXL6 1004 aa9.01□□□□□ -0.97
CALCOCO2-208ENST00000506971 VARSP26640 1264 aaKnown RBP9□□□□□ -0.97
CALCOCO2-208ENST00000506971 FBXO31Q5XUX0 539 aaPredicted RBP9□□□□□ -0.97
CALCOCO2-208ENST00000506971 ARMC2Q8NEN0 867 aa9□□□□□ -0.97
CALCOCO2-208ENST00000506971 FAM174AQ8TBP5 190 aa9□□□□□ -0.97
CALCOCO2-208ENST00000506971 DACH1Q9UI36 760 aa9□□□□□ -0.97
CALCOCO2-208ENST00000506971 BPHLQ86WA6 291 aaPredicted RBP8.99□□□□□ -0.97
CALCOCO2-208ENST00000506971 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.99□□□□□ -0.97
CALCOCO2-208ENST00000506971 POTECB2RU33 542 aa8.98□□□□□ -0.97
CALCOCO2-208ENST00000506971 NR6A1Q15406 480 aa8.98□□□□□ -0.97
CALCOCO2-208ENST00000506971 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
CALCOCO2-208ENST00000506971 NBPF14Q5TI25 921 aa8.98□□□□□ -0.97
CALCOCO2-208ENST00000506971 SIAH2O43255 324 aa8.97□□□□□ -0.97
CALCOCO2-208ENST00000506971 AVPP01185 164 aa8.96□□□□□ -0.98
CALCOCO2-208ENST00000506971 RFC5P40937 340 aa8.96□□□□□ -0.98
CALCOCO2-208ENST00000506971 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
CALCOCO2-208ENST00000506971 USP17L8P0C7I0 530 aa8.95□□□□□ -0.98
CALCOCO2-208ENST00000506971 GMPR2Q9P2T1 348 aaKnown RBP8.95□□□□□ -0.98
CALCOCO2-208ENST00000506971 CAPN5O15484 640 aaPredicted RBP8.94□□□□□ -0.98
CALCOCO2-208ENST00000506971 NNTQ13423 1086 aa8.94□□□□□ -0.98
CALCOCO2-208ENST00000506971 PPP2R2DQ66LE6 453 aa8.94□□□□□ -0.98
CALCOCO2-208ENST00000506971 C4orf48Q5BLP8 95 aa8.93□□□□□ -0.98
CALCOCO2-208ENST00000506971 ZBTB33Q86T24 672 aa8.93□□□□□ -0.98
CALCOCO2-208ENST00000506971 ARHGAP9Q9BRR9 750 aa8.93□□□□□ -0.98
CALCOCO2-208ENST00000506971 FKBPLQ9UIM3 349 aa8.93□□□□□ -0.98
CALCOCO2-208ENST00000506971 VASH1Q7L8A9 365 aaPredicted RBP8.92□□□□□ -0.98
CALCOCO2-208ENST00000506971 PNMA1Q8ND90 353 aa8.92□□□□□ -0.98
CALCOCO2-208ENST00000506971 EPS8L1Q8TE68 723 aa8.92□□□□□ -0.98
CALCOCO2-208ENST00000506971 BMP1P13497 986 aa8.91□□□□□ -0.98
CALCOCO2-208ENST00000506971 WDR4P57081 412 aaKnown RBP8.91□□□□□ -0.98
CALCOCO2-208ENST00000506971 CRIPAKQ8N1N5 446 aa8.91□□□□□ -0.98
CALCOCO2-208ENST00000506971 HMX1Q9NP08 348 aaPredicted RBP8.91□□□□□ -0.98
CALCOCO2-208ENST00000506971 ATP13A2Q9NQ11 1180 aa8.91□□□□□ -0.98
CALCOCO2-208ENST00000506971 ADH1CP00326 375 aa8.9□□□□□ -0.98
CALCOCO2-208ENST00000506971 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
CALCOCO2-208ENST00000506971 GOPCQ9HD26 462 aa8.9□□□□□ -0.98
CALCOCO2-208ENST00000506971 FSHRP23945 695 aa8.89□□□□□ -0.99
CALCOCO2-208ENST00000506971 TMEM259Q4ZIN3 620 aa8.89□□□□□ -0.99
CALCOCO2-208ENST00000506971 RAB15P59190 212 aa8.88□□□□□ -0.99
CALCOCO2-208ENST00000506971 PTK2Q05397 1052 aa8.88□□□□□ -0.99
CALCOCO2-208ENST00000506971 GPKOWQ92917 476 aaPredicted RBP eCLIP8.88□□□□□ -0.99
CALCOCO2-208ENST00000506971 SLC10A4Q96EP9 437 aa8.88□□□□□ -0.99
CALCOCO2-208ENST00000506971 SH3BP5LQ7L8J4 393 aa8.87□□□□□ -0.99
CALCOCO2-208ENST00000506971 ZNF775Q96BV0 537 aaPredicted RBP8.87□□□□□ -0.99
CALCOCO2-208ENST00000506971 ZIC2O95409 532 aaPredicted RBP8.86□□□□□ -0.99
CALCOCO2-208ENST00000506971 ERFEQ4G0M1 354 aa8.86□□□□□ -0.99
CALCOCO2-208ENST00000506971 PDXDC2PQ6P474 469 aa8.86□□□□□ -0.99
CALCOCO2-208ENST00000506971 SENP2Q9HC62 589 aa8.86□□□□□ -0.99
CALCOCO2-208ENST00000506971 SNRPBP14678 240 aaKnown RBP8.85□□□□□ -0.99
CALCOCO2-208ENST00000506971 NR5A1Q13285 461 aa8.85□□□□□ -0.99
CALCOCO2-208ENST00000506971 SH3RF1Q7Z6J0 888 aa8.85□□□□□ -0.99
CALCOCO2-208ENST00000506971 CDK15Q96Q40 435 aa8.85□□□□□ -0.99
CALCOCO2-208ENST00000506971 ZFAND3Q9H8U3 227 aa8.85□□□□□ -0.99
CALCOCO2-208ENST00000506971 NR3C2P08235 984 aa8.84□□□□□ -0.99
CALCOCO2-208ENST00000506971 SCARF1Q14162 830 aa8.84□□□□□ -0.99
CALCOCO2-208ENST00000506971 C6orf118Q5T5N4 469 aa8.84□□□□□ -0.99
CALCOCO2-208ENST00000506971 DZIP3Q86Y13 1208 aaKnown RBP8.84□□□□□ -0.99
CALCOCO2-208ENST00000506971 TIMP2P16035 220 aa8.83□□□□□ -1
CALCOCO2-208ENST00000506971 GRM5P41594 1212 aa8.83□□□□□ -1
CALCOCO2-208ENST00000506971 MPNDQ8N594 471 aa8.83□□□□□ -1
CALCOCO2-208ENST00000506971 ADAM32Q8TC27 787 aa8.83□□□□□ -1
CALCOCO2-208ENST00000506971 ITPKCQ96DU7 683 aa8.83□□□□□ -1
CALCOCO2-208ENST00000506971 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
CALCOCO2-208ENST00000506971 UPP2O95045 317 aa8.82□□□□□ -1
CALCOCO2-208ENST00000506971 KIFC2Q96AC6 838 aa8.82□□□□□ -1
CALCOCO2-208ENST00000506971 ZC3H4Q9UPT8 1303 aaKnown RBP8.81□□□□□ -1
CALCOCO2-208ENST00000506971 TRIM46Q7Z4K8 759 aa8.81□□□□□ -1
CALCOCO2-208ENST00000506971 CCDC116Q8IYX3 515 aa8.81□□□□□ -1
CALCOCO2-208ENST00000506971 ZFP42Q96MM3 310 aa8.81□□□□□ -1
CALCOCO2-208ENST00000506971 KCTD15Q96SI1 283 aaPredicted RBP8.81□□□□□ -1
CALCOCO2-208ENST00000506971 C1QTNF2Q9BXJ5 285 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms