RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 HAP1P54257 671 aaPredicted RBP19.75■□□□□ 0.75
DDX41-206ENST00000506965 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
DDX41-206ENST00000506965 BTG4Q9NY30 223 aa19.74■□□□□ 0.75
DDX41-206ENST00000506965 RGPD1P0DJD0 1748 aa19.72■□□□□ 0.75
DDX41-206ENST00000506965 FAM98CQ17RN3 349 aaKnown RBP19.72■□□□□ 0.75
DDX41-206ENST00000506965 FAM182BQ5T319 152 aa19.72■□□□□ 0.75
DDX41-206ENST00000506965 KRT27Q7Z3Y8 459 aa19.72■□□□□ 0.75
DDX41-206ENST00000506965 CCDC9Q9Y3X0 531 aaKnown RBP19.72■□□□□ 0.75
DDX41-206ENST00000506965 LRP5O75197 1615 aa19.71■□□□□ 0.75
DDX41-206ENST00000506965 NRKQ7Z2Y5 1582 aa19.7■□□□□ 0.74
DDX41-206ENST00000506965 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
DDX41-206ENST00000506965 SPATA31A5Q5VU36 1347 aa19.69■□□□□ 0.74
DDX41-206ENST00000506965 SPATA31A7Q8IWB4 1347 aa19.69■□□□□ 0.74
DDX41-206ENST00000506965 EIF3AQ14152 1382 aaKnown RBP19.69■□□□□ 0.74
DDX41-206ENST00000506965 LMO7Q8WWI1 1683 aa19.68■□□□□ 0.74
DDX41-206ENST00000506965 NUDT16Q96DE0 195 aaKnown RBP19.68■□□□□ 0.74
DDX41-206ENST00000506965 KIAA0232Q92628 1395 aa19.67■□□□□ 0.74
DDX41-206ENST00000506965 NGDNQ8NEJ9 315 aaKnown RBP19.66■□□□□ 0.74
DDX41-206ENST00000506965 POLR3AO14802 1390 aaPredicted RBP19.66■□□□□ 0.74
DDX41-206ENST00000506965 CHRNA2Q15822 529 aa19.65■□□□□ 0.74
DDX41-206ENST00000506965 NBPF1Q3BBV0 1214 aa19.65■□□□□ 0.74
DDX41-206ENST00000506965 CAMTA1Q9Y6Y1 1673 aa19.65■□□□□ 0.74
DDX41-206ENST00000506965 PAK3O75914 559 aaPredicted RBP19.64■□□□□ 0.73
DDX41-206ENST00000506965 HRCP23327 699 aa19.64■□□□□ 0.73
DDX41-206ENST00000506965 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.73
DDX41-206ENST00000506965 CDK19Q9BWU1 502 aa19.64■□□□□ 0.73
DDX41-206ENST00000506965 QRICH2Q9H0J4 1663 aa19.63■□□□□ 0.73
DDX41-206ENST00000506965 SPATA31A1Q5TZJ5 1347 aa19.62■□□□□ 0.73
DDX41-206ENST00000506965 PSDA5PKW4 1024 aaPredicted RBP19.62■□□□□ 0.73
DDX41-206ENST00000506965 PRDM11Q9NQV5 511 aa19.62■□□□□ 0.73
DDX41-206ENST00000506965 ACEP12821 1306 aa19.61■□□□□ 0.73
DDX41-206ENST00000506965 A0A0G2JS52 829 aa19.61■□□□□ 0.73
DDX41-206ENST00000506965 MYT1Q01538 1121 aa19.61■□□□□ 0.73
DDX41-206ENST00000506965 STAC3Q96MF2 364 aa19.61■□□□□ 0.73
DDX41-206ENST00000506965 RREB1Q92766 1687 aa19.6■□□□□ 0.73
DDX41-206ENST00000506965 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
DDX41-206ENST00000506965 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
DDX41-206ENST00000506965 DISP2A7MBM2 1401 aa19.59■□□□□ 0.73
DDX41-206ENST00000506965 NBPF8Q3BBV2 869 aa19.59■□□□□ 0.73
DDX41-206ENST00000506965 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.72
DDX41-206ENST00000506965 SF3B2Q13435 895 aaKnown RBP19.58■□□□□ 0.72
DDX41-206ENST00000506965 NUP188Q5SRE5 1749 aa19.58■□□□□ 0.72
DDX41-206ENST00000506965 SSH2Q76I76 1423 aa19.58■□□□□ 0.72
DDX41-206ENST00000506965 USP19O94966 1318 aa19.57■□□□□ 0.72
DDX41-206ENST00000506965 COL18A1P39060 1754 aa19.57■□□□□ 0.72
DDX41-206ENST00000506965 PIK3C2AO00443 1686 aa19.56■□□□□ 0.72
DDX41-206ENST00000506965 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
DDX41-206ENST00000506965 BAG6P46379 1132 aa19.55■□□□□ 0.72
DDX41-206ENST00000506965 STRN4Q9NRL3 753 aa19.55■□□□□ 0.72
DDX41-206ENST00000506965 CCDC61Q9Y6R9 512 aa19.55■□□□□ 0.72
DDX41-206ENST00000506965 RGPD5Q99666 1765 aa19.55■□□□□ 0.72
DDX41-206ENST00000506965 TRPM1Q7Z4N2 1603 aa19.54■□□□□ 0.72
DDX41-206ENST00000506965 PEAK1Q9H792 1746 aa19.54■□□□□ 0.72
DDX41-206ENST00000506965 PPIP5K1Q6PFW1 1433 aa19.54■□□□□ 0.72
DDX41-206ENST00000506965 SBF2Q86WG5 1849 aa19.54■□□□□ 0.72
DDX41-206ENST00000506965 WNK3Q9BYP7 1800 aa19.54■□□□□ 0.72
DDX41-206ENST00000506965 EZH2Q15910 746 aaKnown RBP19.54■□□□□ 0.72
DDX41-206ENST00000506965 LARP1Q6PKG0 1096 aaKnown RBP19.53■□□□□ 0.72
DDX41-206ENST00000506965 CPDO75976 1380 aa19.53■□□□□ 0.72
DDX41-206ENST00000506965 SLIT3O75094 1523 aa19.52■□□□□ 0.72
DDX41-206ENST00000506965 CABP2Q9NPB3 220 aa19.52■□□□□ 0.72
DDX41-206ENST00000506965 COL5A2P05997 1499 aaPredicted RBP19.52■□□□□ 0.72
DDX41-206ENST00000506965 AKAP12Q02952 1782 aa19.52■□□□□ 0.71
DDX41-206ENST00000506965 CAMKK2Q96RR4 588 aa19.51■□□□□ 0.71
DDX41-206ENST00000506965 USP35Q9P2H5 1018 aa19.51■□□□□ 0.71
DDX41-206ENST00000506965 LRRC37A3O60309 1634 aa19.51■□□□□ 0.71
DDX41-206ENST00000506965 TRIM37O94972 964 aa19.5■□□□□ 0.71
DDX41-206ENST00000506965 R3HDM1Q15032 1099 aaKnown RBP19.49■□□□□ 0.71
DDX41-206ENST00000506965 ABTB2Q8N961 1025 aa19.49■□□□□ 0.71
DDX41-206ENST00000506965 CENPJQ9HC77 1338 aaPredicted RBP19.49■□□□□ 0.71
DDX41-206ENST00000506965 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
DDX41-206ENST00000506965 USP6P35125 1406 aa19.48■□□□□ 0.71
DDX41-206ENST00000506965 GCP02774 474 aa19.46■□□□□ 0.71
DDX41-206ENST00000506965 SRPK2P78362 688 aaKnown RBP19.45■□□□□ 0.7
DDX41-206ENST00000506965 L3MBTL2Q969R5 705 aa19.45■□□□□ 0.7
DDX41-206ENST00000506965 FAM196AQ6ZSG2 479 aa19.44■□□□□ 0.7
DDX41-206ENST00000506965 SIN3AQ96ST3 1273 aa19.43■□□□□ 0.7
DDX41-206ENST00000506965 CABP1Q9NZU7 370 aa19.43■□□□□ 0.7
DDX41-206ENST00000506965 TCP11L2Q8N4U5 519 aa19.42■□□□□ 0.7
DDX41-206ENST00000506965 MON2Q7Z3U7 1717 aa19.42■□□□□ 0.7
DDX41-206ENST00000506965 APBA3O96018 575 aa19.41■□□□□ 0.7
DDX41-206ENST00000506965 EVA1CP58658 441 aa19.41■□□□□ 0.7
DDX41-206ENST00000506965 PTF1AQ7RTS3 328 aa19.41■□□□□ 0.7
DDX41-206ENST00000506965 RGPD3A6NKT7 1758 aaPredicted RBP19.41■□□□□ 0.7
DDX41-206ENST00000506965 RGPD4Q7Z3J3 1758 aa19.41■□□□□ 0.7
DDX41-206ENST00000506965 CRB1P82279 1406 aa19.41■□□□□ 0.7
DDX41-206ENST00000506965 NLRP13Q86W25 1043 aa19.4■□□□□ 0.7
DDX41-206ENST00000506965 AXIN2Q9Y2T1 843 aa19.4■□□□□ 0.7
DDX41-206ENST00000506965 NFAT5O94916 1531 aa19.4■□□□□ 0.7
DDX41-206ENST00000506965 AATKQ6ZMQ8 1374 aa19.39■□□□□ 0.69
DDX41-206ENST00000506965 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
DDX41-206ENST00000506965 CASZ1Q86V15 1759 aa19.37■□□□□ 0.69
DDX41-206ENST00000506965 USP54Q70EL1 1684 aa19.37■□□□□ 0.69
DDX41-206ENST00000506965 PARD3Q8TEW0 1356 aa19.37■□□□□ 0.69
DDX41-206ENST00000506965 CPSF1Q10570 1443 aaKnown RBP19.36■□□□□ 0.69
DDX41-206ENST00000506965 NLRP6P59044 892 aa19.36■□□□□ 0.69
DDX41-206ENST00000506965 PDE3BQ13370 1112 aa19.36■□□□□ 0.69
DDX41-206ENST00000506965 THRAP3Q9Y2W1 955 aaKnown RBP19.35■□□□□ 0.69
DDX41-206ENST00000506965 ZBTB7CA1YPR0 619 aa19.34■□□□□ 0.69
DDX41-206ENST00000506965 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms