RNA–Protein interactions for RNA: ENST00000506841.6

HTR3A-206, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-206ENST00000506841 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
HTR3A-206ENST00000506841 ANKRD26Q9UPS8 1709 aa18.89■□□□□ 0.61
HTR3A-206ENST00000506841 EXOSC9Q06265 439 aaKnown RBP18.89■□□□□ 0.61
HTR3A-206ENST00000506841 FTSJ3Q8IY81 847 aaKnown RBP18.89■□□□□ 0.61
HTR3A-206ENST00000506841 TERF2IPQ9NYB0 399 aa18.89■□□□□ 0.61
HTR3A-206ENST00000506841 YEATS2Q9ULM3 1422 aa18.88■□□□□ 0.61
HTR3A-206ENST00000506841 CLTCQ00610 1675 aaKnown RBP18.88■□□□□ 0.61
HTR3A-206ENST00000506841 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
HTR3A-206ENST00000506841 MINK1Q8N4C8 1332 aaPredicted RBP18.88■□□□□ 0.61
HTR3A-206ENST00000506841 PREX1Q8TCU6 1659 aa18.88■□□□□ 0.61
HTR3A-206ENST00000506841 BECN1Q14457 450 aa18.88■□□□□ 0.61
HTR3A-206ENST00000506841 YTHDC2Q9H6S0 1430 aaKnown RBP18.87■□□□□ 0.61
HTR3A-206ENST00000506841 SMC4Q9NTJ3 1288 aa18.87■□□□□ 0.61
HTR3A-206ENST00000506841 IL16Q14005 1332 aa18.86■□□□□ 0.61
HTR3A-206ENST00000506841 TRIM27P14373 513 aa18.85■□□□□ 0.61
HTR3A-206ENST00000506841 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
HTR3A-206ENST00000506841 TBC1D32Q96NH3 1257 aa18.85■□□□□ 0.61
HTR3A-206ENST00000506841 POGKQ9P215 609 aa18.85■□□□□ 0.61
HTR3A-206ENST00000506841 UPF2Q9HAU5 1272 aaKnown RBP18.85■□□□□ 0.61
HTR3A-206ENST00000506841 PNPLA6Q8IY17 1366 aa18.84■□□□□ 0.61
HTR3A-206ENST00000506841 DIAPH1O60610 1272 aaKnown RBP18.82■□□□□ 0.6
HTR3A-206ENST00000506841 RIPK4P57078 832 aa18.82■□□□□ 0.6
HTR3A-206ENST00000506841 ATF7IPQ6VMQ6 1270 aa18.82■□□□□ 0.6
HTR3A-206ENST00000506841 HDAC1Q13547 482 aaPredicted RBP18.82■□□□□ 0.6
HTR3A-206ENST00000506841 HDGFL2Q7Z4V5 671 aaPredicted RBP18.82■□□□□ 0.6
HTR3A-206ENST00000506841 DDX19BQ9UMR2 479 aa18.82■□□□□ 0.6
HTR3A-206ENST00000506841 ARHGEF40Q8TER5 1519 aa18.81■□□□□ 0.6
HTR3A-206ENST00000506841 CDK19Q9BWU1 502 aa18.81■□□□□ 0.6
HTR3A-206ENST00000506841 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
HTR3A-206ENST00000506841 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
HTR3A-206ENST00000506841 ITPRIPQ8IWB1 547 aa18.8■□□□□ 0.6
HTR3A-206ENST00000506841 FBXO31Q5XUX0 539 aaPredicted RBP18.8■□□□□ 0.6
HTR3A-206ENST00000506841 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
HTR3A-206ENST00000506841 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
HTR3A-206ENST00000506841 CABP1Q9NZU7 370 aa18.79■□□□□ 0.6
HTR3A-206ENST00000506841 SLKQ9H2G2 1235 aaPredicted RBP18.78■□□□□ 0.6
HTR3A-206ENST00000506841 BRPF3Q9ULD4 1205 aa18.78■□□□□ 0.6
HTR3A-206ENST00000506841 KIF20BQ96Q89 1820 aa18.78■□□□□ 0.6
HTR3A-206ENST00000506841 CDC42BPGQ6DT37 1551 aa18.78■□□□□ 0.6
HTR3A-206ENST00000506841 TBC1D2Q9BYX2 928 aa18.78■□□□□ 0.6
HTR3A-206ENST00000506841 TMEM57Q8N5G2 664 aa18.77■□□□□ 0.6
HTR3A-206ENST00000506841 FCHSD2O94868 740 aa18.77■□□□□ 0.59
HTR3A-206ENST00000506841 LRRC7Q96NW7 1537 aa18.76■□□□□ 0.59
HTR3A-206ENST00000506841 SMC5Q8IY18 1101 aa18.76■□□□□ 0.59
HTR3A-206ENST00000506841 ZBTB40Q9NUA8 1239 aa18.76■□□□□ 0.59
HTR3A-206ENST00000506841 KIF16BQ96L93 1317 aa18.76■□□□□ 0.59
HTR3A-206ENST00000506841 RTN4Q9NQC3 1192 aaKnown RBP18.76■□□□□ 0.59
HTR3A-206ENST00000506841 IPO8O15397 1037 aaKnown RBP18.74■□□□□ 0.59
HTR3A-206ENST00000506841 ALDH1L2Q3SY69 923 aa18.74■□□□□ 0.59
HTR3A-206ENST00000506841 FAM135BQ49AJ0 1406 aa18.74■□□□□ 0.59
HTR3A-206ENST00000506841 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
HTR3A-206ENST00000506841 POLKQ9UBT6 870 aa18.73■□□□□ 0.59
HTR3A-206ENST00000506841 PRKAR2BP31323 418 aa18.73■□□□□ 0.59
HTR3A-206ENST00000506841 DLC1Q96QB1 1528 aa18.72■□□□□ 0.59
HTR3A-206ENST00000506841 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.72■□□□□ 0.59
HTR3A-206ENST00000506841 STAG3Q9UJ98 1225 aa18.72■□□□□ 0.59
HTR3A-206ENST00000506841 ATP7BP35670 1465 aa18.72■□□□□ 0.59
HTR3A-206ENST00000506841 C22orf23Q9BZE7 217 aa18.72■□□□□ 0.59
HTR3A-206ENST00000506841 FBLN1P23142 703 aa18.71■□□□□ 0.59
HTR3A-206ENST00000506841 MFAP1P55081 439 aaKnown RBP18.7■□□□□ 0.58
HTR3A-206ENST00000506841 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
HTR3A-206ENST00000506841 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
HTR3A-206ENST00000506841 WAPLQ7Z5K2 1190 aa18.7■□□□□ 0.58
HTR3A-206ENST00000506841 ZNF428Q96B54 188 aa18.69■□□□□ 0.58
HTR3A-206ENST00000506841 NUCB1Q02818 461 aa18.68■□□□□ 0.58
HTR3A-206ENST00000506841 A2ML1A8K2U0 1454 aa18.68■□□□□ 0.58
HTR3A-206ENST00000506841 NFE2L2Q16236 605 aa18.68■□□□□ 0.58
HTR3A-206ENST00000506841 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
HTR3A-206ENST00000506841 SETD1AO15047 1707 aaKnown RBP18.67■□□□□ 0.58
HTR3A-206ENST00000506841 RIMBP3CA6NJZ7 1639 aa18.66■□□□□ 0.58
HTR3A-206ENST00000506841 RIMBP3BA6NNM3 1639 aa18.66■□□□□ 0.58
HTR3A-206ENST00000506841 RIMBP3Q9UFD9 1639 aa18.66■□□□□ 0.58
HTR3A-206ENST00000506841 HMOX1P09601 288 aa18.66■□□□□ 0.58
HTR3A-206ENST00000506841 RIMS2Q9UQ26 1411 aa18.65■□□□□ 0.58
HTR3A-206ENST00000506841 VAMP4O75379 141 aa18.65■□□□□ 0.58
HTR3A-206ENST00000506841 MAP2P11137 1827 aaKnown RBP18.65■□□□□ 0.58
HTR3A-206ENST00000506841 CPSF1Q10570 1443 aaKnown RBP18.65■□□□□ 0.58
HTR3A-206ENST00000506841 MRPL50Q8N5N7 158 aaKnown RBP18.64■□□□□ 0.57
HTR3A-206ENST00000506841 THUMPD2Q9BTF0 503 aaKnown RBP18.64■□□□□ 0.57
HTR3A-206ENST00000506841 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
HTR3A-206ENST00000506841 EMILIN1Q9Y6C2 1016 aa18.64■□□□□ 0.57
HTR3A-206ENST00000506841 EDC4Q6P2E9 1401 aaKnown RBP18.64■□□□□ 0.57
HTR3A-206ENST00000506841 IL13P35225 146 aa18.64■□□□□ 0.57
HTR3A-206ENST00000506841 CALD1Q05682 793 aaKnown RBP18.64■□□□□ 0.57
HTR3A-206ENST00000506841 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
HTR3A-206ENST00000506841 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
HTR3A-206ENST00000506841 LNPKQ9C0E8 428 aa18.64■□□□□ 0.57
HTR3A-206ENST00000506841 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
HTR3A-206ENST00000506841 SPATA31D1Q6ZQQ2 1576 aa18.63■□□□□ 0.57
HTR3A-206ENST00000506841 REREQ9P2R6 1566 aa18.63■□□□□ 0.57
HTR3A-206ENST00000506841 ZBTB7BO15156 539 aaPredicted RBP18.63■□□□□ 0.57
HTR3A-206ENST00000506841 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
HTR3A-206ENST00000506841 AGLP35573 1532 aa18.63■□□□□ 0.57
HTR3A-206ENST00000506841 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
HTR3A-206ENST00000506841 TSPYL6Q8N831 410 aa18.62■□□□□ 0.57
HTR3A-206ENST00000506841 IFT57Q9NWB7 429 aa18.62■□□□□ 0.57
HTR3A-206ENST00000506841 CDK12Q9NYV4 1490 aaPredicted RBP18.62■□□□□ 0.57
HTR3A-206ENST00000506841 ZNF853P0CG23 659 aa18.62■□□□□ 0.57
HTR3A-206ENST00000506841 GNAI1P63096 354 aa18.62■□□□□ 0.57
HTR3A-206ENST00000506841 WASLO00401 505 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms