RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 PHF8Q9UPP1 1060 aa7.27□□□□□ -1.25
CPNE4-207ENST00000506687 EID1Q9Y6B2 187 aa7.27□□□□□ -1.25
CPNE4-207ENST00000506687 ZC3H13Q5T200 1668 aaKnown RBP7.27□□□□□ -1.25
CPNE4-207ENST00000506687 PRDM15P57071 1507 aaPredicted RBP7.27□□□□□ -1.25
CPNE4-207ENST00000506687 HFM1A2PYH4 1435 aa7.27□□□□□ -1.25
CPNE4-207ENST00000506687 PSDA5PKW4 1024 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-207ENST00000506687 SF3B2Q13435 895 aaKnown RBP7.26□□□□□ -1.25
CPNE4-207ENST00000506687 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
CPNE4-207ENST00000506687 EFCAB3Q8N7B9 438 aa7.26□□□□□ -1.25
CPNE4-207ENST00000506687 CCDC97Q96F63 343 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-207ENST00000506687 GZF1Q9H116 711 aaPredicted RBP7.26□□□□□ -1.25
CPNE4-207ENST00000506687 XIRP1Q702N8 1843 aaKnown RBP7.26□□□□□ -1.25
CPNE4-207ENST00000506687 SHPRHQ149N8 1683 aa7.25□□□□□ -1.25
CPNE4-207ENST00000506687 RBM25P49756 843 aaKnown RBP7.25□□□□□ -1.25
CPNE4-207ENST00000506687 CAMK2BQ13554 666 aa7.25□□□□□ -1.25
CPNE4-207ENST00000506687 FOXD4L5Q5VV16 416 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-207ENST00000506687 PARP9Q8IXQ6 854 aa7.25□□□□□ -1.25
CPNE4-207ENST00000506687 ZNF784Q8NCA9 323 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-207ENST00000506687 FOXD4L4Q8WXT5 416 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-207ENST00000506687 SERPINA10Q9UK55 444 aa7.25□□□□□ -1.25
CPNE4-207ENST00000506687 AHDC1Q5TGY3 1603 aaPredicted RBP7.25□□□□□ -1.25
CPNE4-207ENST00000506687 NKTRP30414 1462 aaKnown RBP7.24□□□□□ -1.25
CPNE4-207ENST00000506687 BCL9LQ86UU0 1499 aa7.24□□□□□ -1.25
CPNE4-207ENST00000506687 MFAP1P55081 439 aaKnown RBP7.24□□□□□ -1.25
CPNE4-207ENST00000506687 ZNF428Q96B54 188 aa7.24□□□□□ -1.25
CPNE4-207ENST00000506687 CRISPLD2Q9H0B8 497 aa7.24□□□□□ -1.25
CPNE4-207ENST00000506687 TSPYL2Q9H2G4 693 aaPredicted RBP7.24□□□□□ -1.25
CPNE4-207ENST00000506687 USP21Q9UK80 565 aa7.24□□□□□ -1.25
CPNE4-207ENST00000506687 ARHGAP23Q9P227 1491 aa7.24□□□□□ -1.25
CPNE4-207ENST00000506687 LMTK2Q8IWU2 1503 aa7.23□□□□□ -1.25
CPNE4-207ENST00000506687 GCC2Q8IWJ2 1684 aa7.23□□□□□ -1.25
CPNE4-207ENST00000506687 SOX12O15370 315 aa7.23□□□□□ -1.25
CPNE4-207ENST00000506687 CCDC102AQ96A19 550 aa7.23□□□□□ -1.25
CPNE4-207ENST00000506687 LRRC59Q96AG4 307 aaKnown RBP7.23□□□□□ -1.25
CPNE4-207ENST00000506687 PCMTD1Q96MG8 357 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-207ENST00000506687 GOPCQ9HD26 462 aa7.23□□□□□ -1.25
CPNE4-207ENST00000506687 ARHGAP31Q2M1Z3 1444 aa7.23□□□□□ -1.25
CPNE4-207ENST00000506687 MINK1Q8N4C8 1332 aaPredicted RBP7.23□□□□□ -1.25
CPNE4-207ENST00000506687 SLIT1O75093 1534 aa7.22□□□□□ -1.25
CPNE4-207ENST00000506687 UNC13BO14795 1591 aa7.22□□□□□ -1.25
CPNE4-207ENST00000506687 SETD5Q9C0A6 1442 aa7.22□□□□□ -1.25
CPNE4-207ENST00000506687 NCOA3Q9Y6Q9 1424 aa7.22□□□□□ -1.25
CPNE4-207ENST00000506687 MCM6Q14566 821 aa7.22□□□□□ -1.25
CPNE4-207ENST00000506687 CABP2Q9NPB3 220 aa7.22□□□□□ -1.25
CPNE4-207ENST00000506687 DIP2AQ14689 1571 aa7.21□□□□□ -1.25
CPNE4-207ENST00000506687 GPR37O15354 613 aa7.21□□□□□ -1.26
CPNE4-207ENST00000506687 SLC34A2O95436 690 aa7.21□□□□□ -1.26
CPNE4-207ENST00000506687 AMHR2Q16671 573 aa7.21□□□□□ -1.26
CPNE4-207ENST00000506687 FNBP4Q8N3X1 1017 aaPredicted RBP7.21□□□□□ -1.26
CPNE4-207ENST00000506687 RETREG2Q8NC44 543 aa7.21□□□□□ -1.26
CPNE4-207ENST00000506687 SLC26A8Q96RN1 970 aa7.21□□□□□ -1.26
CPNE4-207ENST00000506687 EP400Q96L91 3159 aa7.21□□□□□ -1.26
CPNE4-207ENST00000506687 NUP155O75694 1391 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 ATRNO75882 1429 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 IRF6O14896 467 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 ADAMTS2O95450 1211 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 ATF3P18847 181 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 BRINP3Q76B58 766 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 CEP152O94986 1710 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 KANK1Q14678 1352 aa7.2□□□□□ -1.26
CPNE4-207ENST00000506687 IQGAP3Q86VI3 1631 aa7.19□□□□□ -1.26
CPNE4-207ENST00000506687 MAP2K5Q13163 448 aa7.19□□□□□ -1.26
CPNE4-207ENST00000506687 C19orf44Q9H6X5 657 aa7.19□□□□□ -1.26
CPNE4-207ENST00000506687 ACIN1Q9UKV3 1341 aaKnown RBP7.19□□□□□ -1.26
CPNE4-207ENST00000506687 RAB3GAP2Q9H2M9 1393 aa7.19□□□□□ -1.26
CPNE4-207ENST00000506687 TMEM2Q9UHN6 1383 aa7.19□□□□□ -1.26
CPNE4-207ENST00000506687 NOS1P29475 1434 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 BAG6P46379 1132 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 IRF5Q13568 498 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 TTLL12Q14166 644 aaPredicted RBP7.18□□□□□ -1.26
CPNE4-207ENST00000506687 R3HDM1Q15032 1099 aaKnown RBP7.18□□□□□ -1.26
CPNE4-207ENST00000506687 ZNF579Q8NAF0 562 aaKnown RBP7.18□□□□□ -1.26
CPNE4-207ENST00000506687 POM121Q96HA1 1249 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 PCDH10Q9P2E7 1040 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 CFAP65Q6ZU64 1925 aaKnown RBP7.18□□□□□ -1.26
CPNE4-207ENST00000506687 TET3O43151 1660 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 PNPLA6Q8IY17 1366 aa7.18□□□□□ -1.26
CPNE4-207ENST00000506687 ERVK-7P63135 1459 aa7.17□□□□□ -1.26
CPNE4-207ENST00000506687 RPRD2Q5VT52 1461 aaKnown RBP7.17□□□□□ -1.26
CPNE4-207ENST00000506687 EFCAB6Q5THR3 1501 aa7.17□□□□□ -1.26
CPNE4-207ENST00000506687 DPYSL4O14531 572 aa7.17□□□□□ -1.26
CPNE4-207ENST00000506687 FBXW7Q969H0 707 aa7.17□□□□□ -1.26
CPNE4-207ENST00000506687 GJD4Q96KN9 370 aaPredicted RBP7.17□□□□□ -1.26
CPNE4-207ENST00000506687 E9PCH4 1651 aa7.16□□□□□ -1.26
CPNE4-207ENST00000506687 NUTM2FA1L443 756 aa7.16□□□□□ -1.26
CPNE4-207ENST00000506687 MPHOSPH9Q99550 1183 aa7.16□□□□□ -1.26
CPNE4-207ENST00000506687 KDM5AP29375 1690 aaKnown RBP7.16□□□□□ -1.26
CPNE4-207ENST00000506687 IDI1Q13907 227 aa7.15□□□□□ -1.26
CPNE4-207ENST00000506687 NINLQ9Y2I6 1382 aa7.15□□□□□ -1.26
CPNE4-207ENST00000506687 SPDYE16A6NNV3 312 aaPredicted RBP7.14□□□□□ -1.27
CPNE4-207ENST00000506687 E9PSI1 815 aa7.14□□□□□ -1.27
CPNE4-207ENST00000506687 PTCH1Q13635 1447 aa7.14□□□□□ -1.27
CPNE4-207ENST00000506687 SLC52A1Q9NWF4 448 aa7.14□□□□□ -1.27
CPNE4-207ENST00000506687 PPP1R1BQ9UD71 204 aaPredicted RBP7.14□□□□□ -1.27
CPNE4-207ENST00000506687 UBR1Q8IWV7 1749 aa7.13□□□□□ -1.27
CPNE4-207ENST00000506687 GIGYF1O75420 1035 aaPredicted RBP7.13□□□□□ -1.27
CPNE4-207ENST00000506687 MS4A1P11836 297 aa7.13□□□□□ -1.27
CPNE4-207ENST00000506687 PPP1R15BQ5SWA1 713 aa7.13□□□□□ -1.27
CPNE4-207ENST00000506687 MS4A4AQ96JQ5 239 aa7.13□□□□□ -1.27
CPNE4-207ENST00000506687 PLSCR2Q9NRY7 297 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms