RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 COL3A1P02461 1466 aaPredicted RBP16.07■□□□□ 0.16
LIN54-206ENST00000506560 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
LIN54-206ENST00000506560 C20orf194Q5TEA3 1177 aa16.07■□□□□ 0.16
LIN54-206ENST00000506560 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
LIN54-206ENST00000506560 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
LIN54-206ENST00000506560 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
LIN54-206ENST00000506560 TBX22Q9Y458 520 aa16.06■□□□□ 0.16
LIN54-206ENST00000506560 EMILIN1Q9Y6C2 1016 aa16.06■□□□□ 0.16
LIN54-206ENST00000506560 IQSEC2Q5JU85 1478 aa16.06■□□□□ 0.16
LIN54-206ENST00000506560 TRMT2AQ8IZ69 625 aaKnown RBP16.05■□□□□ 0.16
LIN54-206ENST00000506560 POLKQ9UBT6 870 aa16.05■□□□□ 0.16
LIN54-206ENST00000506560 KCNA6P17658 529 aa16.05■□□□□ 0.16
LIN54-206ENST00000506560 CDC42BPGQ6DT37 1551 aa16.05■□□□□ 0.16
LIN54-206ENST00000506560 NKTRP30414 1462 aaKnown RBP16.05■□□□□ 0.16
LIN54-206ENST00000506560 EDC4Q6P2E9 1401 aaKnown RBP16.04■□□□□ 0.16
LIN54-206ENST00000506560 RRS1Q15050 365 aaKnown RBP16.03■□□□□ 0.16
LIN54-206ENST00000506560 PMFBP1Q8TBY8 1022 aa16.03■□□□□ 0.16
LIN54-206ENST00000506560 MAP2P11137 1827 aaKnown RBP16.03■□□□□ 0.16
LIN54-206ENST00000506560 ACEP12821 1306 aa16.03■□□□□ 0.16
LIN54-206ENST00000506560 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
LIN54-206ENST00000506560 ADAMTSL3P82987 1691 aa16.02■□□□□ 0.15
LIN54-206ENST00000506560 MON2Q7Z3U7 1717 aa16.01■□□□□ 0.15
LIN54-206ENST00000506560 PLEKHF1Q96S99 279 aa16.01■□□□□ 0.15
LIN54-206ENST00000506560 CRBNQ96SW2 442 aa16.01■□□□□ 0.15
LIN54-206ENST00000506560 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
LIN54-206ENST00000506560 AKAP12Q02952 1782 aa16.01■□□□□ 0.15
LIN54-206ENST00000506560 ADGRB2O60241 1585 aa16■□□□□ 0.15
LIN54-206ENST00000506560 BCAR3O75815 825 aa16■□□□□ 0.15
LIN54-206ENST00000506560 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
LIN54-206ENST00000506560 DIAPH1O60610 1272 aaKnown RBP16■□□□□ 0.15
LIN54-206ENST00000506560 E9PSI1 815 aa15.99■□□□□ 0.15
LIN54-206ENST00000506560 PHF23Q9BUL5 403 aaPredicted RBP15.99■□□□□ 0.15
LIN54-206ENST00000506560 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
LIN54-206ENST00000506560 SOX12O15370 315 aa15.98■□□□□ 0.15
LIN54-206ENST00000506560 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
LIN54-206ENST00000506560 HMOX1P09601 288 aa15.98■□□□□ 0.15
LIN54-206ENST00000506560 COG3Q96JB2 828 aa15.98■□□□□ 0.15
LIN54-206ENST00000506560 PTCH1Q13635 1447 aa15.98■□□□□ 0.15
LIN54-206ENST00000506560 XRN1Q8IZH2 1706 aaKnown RBP15.97■□□□□ 0.15
LIN54-206ENST00000506560 TTC21BQ7Z4L5 1316 aa15.97■□□□□ 0.15
LIN54-206ENST00000506560 DIP2AQ14689 1571 aa15.96■□□□□ 0.15
LIN54-206ENST00000506560 PLEKHG3A1L390 1219 aa15.96■□□□□ 0.15
LIN54-206ENST00000506560 ANKLE2Q86XL3 938 aa15.96■□□□□ 0.15
LIN54-206ENST00000506560 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
LIN54-206ENST00000506560 ZNF692Q9BU19 519 aaPredicted RBP15.95■□□□□ 0.14
LIN54-206ENST00000506560 TRIM35Q9UPQ4 493 aa15.95■□□□□ 0.14
LIN54-206ENST00000506560 USP6P35125 1406 aa15.95■□□□□ 0.14
LIN54-206ENST00000506560 NRKQ7Z2Y5 1582 aa15.94■□□□□ 0.14
LIN54-206ENST00000506560 SETD1BQ9UPS6 1966 aaKnown RBP15.94■□□□□ 0.14
LIN54-206ENST00000506560 TSR2Q969E8 191 aaKnown RBP15.94■□□□□ 0.14
LIN54-206ENST00000506560 PHACTR3Q96KR7 559 aa15.94■□□□□ 0.14
LIN54-206ENST00000506560 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
LIN54-206ENST00000506560 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
LIN54-206ENST00000506560 IL13P35225 146 aa15.93■□□□□ 0.14
LIN54-206ENST00000506560 SKAP1Q86WV1 359 aa15.93■□□□□ 0.14
LIN54-206ENST00000506560 NGEFQ8N5V2 710 aa15.92■□□□□ 0.14
LIN54-206ENST00000506560 BCL2L13Q9BXK5 485 aa15.92■□□□□ 0.14
LIN54-206ENST00000506560 RSPH6AQ9H0K4 717 aa15.92■□□□□ 0.14
LIN54-206ENST00000506560 RBM19Q9Y4C8 960 aaKnown RBP15.92■□□□□ 0.14
LIN54-206ENST00000506560 ZNF142P52746 1687 aaPredicted RBP15.92■□□□□ 0.14
LIN54-206ENST00000506560 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
LIN54-206ENST00000506560 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
LIN54-206ENST00000506560 RIPK4P57078 832 aa15.91■□□□□ 0.14
LIN54-206ENST00000506560 CCDC27Q2M243 656 aa15.91■□□□□ 0.14
LIN54-206ENST00000506560 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
LIN54-206ENST00000506560 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
LIN54-206ENST00000506560 TNNQ9UQP3 1299 aa15.91■□□□□ 0.14
LIN54-206ENST00000506560 SSH2Q76I76 1423 aa15.91■□□□□ 0.14
LIN54-206ENST00000506560 OVOS2A0A0J9YW53 1432 aa15.9■□□□□ 0.14
LIN54-206ENST00000506560 OVOS2Q6IE36 1432 aa15.9■□□□□ 0.14
LIN54-206ENST00000506560 AATKQ6ZMQ8 1374 aa15.9■□□□□ 0.14
LIN54-206ENST00000506560 THUMPD2Q9BTF0 503 aaKnown RBP15.9■□□□□ 0.14
LIN54-206ENST00000506560 CDK12Q9NYV4 1490 aaPredicted RBP15.89■□□□□ 0.13
LIN54-206ENST00000506560 CHD2O14647 1828 aaKnown RBP15.89■□□□□ 0.13
LIN54-206ENST00000506560 AEBP1Q8IUX7 1158 aa15.88■□□□□ 0.13
LIN54-206ENST00000506560 FCHSD2O94868 740 aa15.88■□□□□ 0.13
LIN54-206ENST00000506560 HSP90AB2PQ58FF8 381 aa15.88■□□□□ 0.13
LIN54-206ENST00000506560 NALCNQ8IZF0 1738 aa15.88■□□□□ 0.13
LIN54-206ENST00000506560 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
LIN54-206ENST00000506560 PEAK1Q9H792 1746 aa15.87■□□□□ 0.13
LIN54-206ENST00000506560 PIK3R4Q99570 1358 aa15.87■□□□□ 0.13
LIN54-206ENST00000506560 RARSP54136 660 aaKnown RBP15.87■□□□□ 0.13
LIN54-206ENST00000506560 FRAT1Q92837 279 aaPredicted RBP15.87■□□□□ 0.13
LIN54-206ENST00000506560 EIF4A2Q14240 407 aaKnown RBP15.86■□□□□ 0.13
LIN54-206ENST00000506560 PANK1Q8TE04 598 aa15.86■□□□□ 0.13
LIN54-206ENST00000506560 NPHP4O75161 1426 aaPredicted RBP15.85■□□□□ 0.13
LIN54-206ENST00000506560 EXOSC9Q06265 439 aaKnown RBP15.85■□□□□ 0.13
LIN54-206ENST00000506560 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
LIN54-206ENST00000506560 MAP3K19Q56UN5 1328 aa15.84■□□□□ 0.13
LIN54-206ENST00000506560 FAM83GA6ND36 823 aa15.83■□□□□ 0.13
LIN54-206ENST00000506560 PIK3C2AO00443 1686 aa15.83■□□□□ 0.13
LIN54-206ENST00000506560 PAK3O75914 559 aaPredicted RBP15.83■□□□□ 0.12
LIN54-206ENST00000506560 RLBP1P12271 317 aa15.83■□□□□ 0.12
LIN54-206ENST00000506560 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
LIN54-206ENST00000506560 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.82■□□□□ 0.12
LIN54-206ENST00000506560 COG6Q9Y2V7 657 aa15.82■□□□□ 0.12
LIN54-206ENST00000506560 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
LIN54-206ENST00000506560 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
LIN54-206ENST00000506560 NLRP6P59044 892 aa15.82■□□□□ 0.12
LIN54-206ENST00000506560 DCTN1Q14203 1278 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms