RNA–Protein interactions for RNA: ENST00000506398.6

FAM172A-205, Transcript of family with sequence similarity 172 member A, humanhuman

TSL 5

Gene FAM172A, Length 965 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-205ENST00000506398 KANK1Q14678 1352 aa11.66□□□□□ -0.54
FAM172A-205ENST00000506398 VIRMAQ69YN4 1812 aaKnown RBP11.65□□□□□ -0.54
FAM172A-205ENST00000506398 RGL3Q3MIN7 710 aa11.65□□□□□ -0.54
FAM172A-205ENST00000506398 ISY1Q9ULR0 285 aaKnown RBP11.65□□□□□ -0.54
FAM172A-205ENST00000506398 SBNO2Q9Y2G9 1366 aa11.65□□□□□ -0.55
FAM172A-205ENST00000506398 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
FAM172A-205ENST00000506398 CT47B1P0C2W7 299 aaPredicted RBP11.64□□□□□ -0.55
FAM172A-205ENST00000506398 PUS7Q96PZ0 661 aaKnown RBP11.64□□□□□ -0.55
FAM172A-205ENST00000506398 UPF2Q9HAU5 1272 aaKnown RBP11.64□□□□□ -0.55
FAM172A-205ENST00000506398 TTC37Q6PGP7 1564 aa11.63□□□□□ -0.55
FAM172A-205ENST00000506398 LSM11P83369 360 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■■■■■ 32.8
FAM172A-205ENST00000506398 CCDC27Q2M243 656 aa11.63□□□□□ -0.55
FAM172A-205ENST00000506398 WDR63Q8IWG1 891 aa11.63□□□□□ -0.55
FAM172A-205ENST00000506398 UBE2Q2Q8WVN8 375 aa11.63□□□□□ -0.55
FAM172A-205ENST00000506398 CLUAP1Q96AJ1 413 aa11.63□□□□□ -0.55
FAM172A-205ENST00000506398 TRPM2O94759 1503 aa11.63□□□□□ -0.55
FAM172A-205ENST00000506398 USP19O94966 1318 aa11.62□□□□□ -0.55
FAM172A-205ENST00000506398 ARAP3Q8WWN8 1544 aa11.62□□□□□ -0.55
FAM172A-205ENST00000506398 TMEM92Q6UXU6 159 aa11.62□□□□□ -0.55
FAM172A-205ENST00000506398 PLCH2O75038 1416 aa11.61□□□□□ -0.55
FAM172A-205ENST00000506398 SPHKAPQ2M3C7 1700 aa11.61□□□□□ -0.55
FAM172A-205ENST00000506398 FRAT2O75474 233 aaPredicted RBP11.61□□□□□ -0.55
FAM172A-205ENST00000506398 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
FAM172A-205ENST00000506398 BRPF3Q9ULD4 1205 aa11.61□□□□□ -0.55
FAM172A-205ENST00000506398 ARHGAP5Q13017 1502 aa11.6□□□□□ -0.55
FAM172A-205ENST00000506398 SYCP2Q9BX26 1530 aa11.6□□□□□ -0.55
FAM172A-205ENST00000506398 RWDD1Q9H446 243 aaPredicted RBP11.6□□□□□ -0.55
FAM172A-205ENST00000506398 CENPJQ9HC77 1338 aaPredicted RBP11.6□□□□□ -0.55
FAM172A-205ENST00000506398 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
FAM172A-205ENST00000506398 MYOM2P54296 1465 aa11.59□□□□□ -0.55
FAM172A-205ENST00000506398 ANTXR1Q9H6X2 564 aa11.59□□□□□ -0.55
FAM172A-205ENST00000506398 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.59□□□□□ -0.55
FAM172A-205ENST00000506398 CEP152O94986 1710 aa11.58□□□□□ -0.56
FAM172A-205ENST00000506398 APAF1O14727 1248 aa11.58□□□□□ -0.56
FAM172A-205ENST00000506398 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
FAM172A-205ENST00000506398 PTMSP20962 102 aa11.58□□□□□ -0.56
FAM172A-205ENST00000506398 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
FAM172A-205ENST00000506398 SENP3-EIF4A1A0A087X0R7 540 aa11.57□□□□□ -0.56
FAM172A-205ENST00000506398 IGHDP01880 384 aa11.57□□□□□ -0.56
FAM172A-205ENST00000506398 WWC1Q8IX03 1113 aa11.57□□□□□ -0.56
FAM172A-205ENST00000506398 RUNDC1Q96C34 613 aa11.57□□□□□ -0.56
FAM172A-205ENST00000506398 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
FAM172A-205ENST00000506398 SLC4A3P48751 1232 aa11.56□□□□□ -0.56
FAM172A-205ENST00000506398 RGS3P49796 1198 aa11.56□□□□□ -0.56
FAM172A-205ENST00000506398 MYOM1P52179 1685 aa11.55□□□□□ -0.56
FAM172A-205ENST00000506398 VWDEQ8N2E2 1590 aa11.55□□□□□ -0.56
FAM172A-205ENST00000506398 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
FAM172A-205ENST00000506398 DEPDC5O75140 1603 aa11.55□□□□□ -0.56
FAM172A-205ENST00000506398 UHRF1BP1LA0JNW5 1464 aa11.55□□□□□ -0.56
FAM172A-205ENST00000506398 TET3O43151 1660 aa11.55□□□□□ -0.56
FAM172A-205ENST00000506398 SHROOM2Q13796 1616 aa11.54□□□□□ -0.56
FAM172A-205ENST00000506398 MYO3AQ8NEV4 1616 aa11.54□□□□□ -0.56
FAM172A-205ENST00000506398 FSD2A1L4K1 749 aa11.54□□□□□ -0.56
FAM172A-205ENST00000506398 BCAR3O75815 825 aa11.54□□□□□ -0.56
FAM172A-205ENST00000506398 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
FAM172A-205ENST00000506398 CHMP5Q9NZZ3 219 aa11.54□□□□□ -0.56
FAM172A-205ENST00000506398 ADGRL1O94910 1474 aa11.54□□□□□ -0.56
FAM172A-205ENST00000506398 NLRP1Q9C000 1473 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 PBX2P40425 430 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 ARSIQ5FYB1 569 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 MYH16Q9H6N6 1097 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 RTN4Q9NQC3 1192 aaKnown RBP11.53□□□□□ -0.56
FAM172A-205ENST00000506398 FBXO3Q9UK99 471 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 SETBP1Q9Y6X0 1596 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 NSD2O96028 1365 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 USP32Q8NFA0 1604 aa11.53□□□□□ -0.56
FAM172A-205ENST00000506398 NRXN1Q9ULB1 1477 aa11.52□□□□□ -0.56
FAM172A-205ENST00000506398 ABCC1P33527 1531 aa11.52□□□□□ -0.57
FAM172A-205ENST00000506398 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
FAM172A-205ENST00000506398 GOLGA6L3A6NEY3 463 aa11.51□□□□□ -0.57
FAM172A-205ENST00000506398 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
FAM172A-205ENST00000506398 MRE11P49959 708 aa11.51□□□□□ -0.57
FAM172A-205ENST00000506398 HDAC1Q13547 482 aaPredicted RBP11.51□□□□□ -0.57
FAM172A-205ENST00000506398 SKAP1Q86WV1 359 aa11.51□□□□□ -0.57
FAM172A-205ENST00000506398 CFAP53Q96M91 514 aa11.51□□□□□ -0.57
FAM172A-205ENST00000506398 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
FAM172A-205ENST00000506398 MAP3K4Q9Y6R4 1608 aa11.5□□□□□ -0.57
FAM172A-205ENST00000506398 MCM4P33991 863 aa11.5□□□□□ -0.57
FAM172A-205ENST00000506398 CLCN1P35523 988 aa11.5□□□□□ -0.57
FAM172A-205ENST00000506398 SKOR2Q2VWA4 1001 aaPredicted RBP11.5□□□□□ -0.57
FAM172A-205ENST00000506398 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
FAM172A-205ENST00000506398 SNX21Q969T3 373 aa11.5□□□□□ -0.57
FAM172A-205ENST00000506398 CHMP4BQ9H444 224 aaKnown RBP11.5□□□□□ -0.57
FAM172A-205ENST00000506398 IL16Q14005 1332 aa11.5□□□□□ -0.57
FAM172A-205ENST00000506398 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 GLIPR1L2Q4G1C9 344 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 CARD14Q9BXL6 1004 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 TBC1D2Q9BYX2 928 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 PDZRN3Q9UPQ7 1066 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 SPAG9O60271 1321 aaKnown RBP11.49□□□□□ -0.57
FAM172A-205ENST00000506398 RPGRIP1LQ68CZ1 1315 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 FANCAO15360 1455 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 CLTCL1P53675 1640 aa11.49□□□□□ -0.57
FAM172A-205ENST00000506398 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
FAM172A-205ENST00000506398 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
FAM172A-205ENST00000506398 COG6Q9Y2V7 657 aa11.48□□□□□ -0.57
FAM172A-205ENST00000506398 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
FAM172A-205ENST00000506398 IQSEC2Q5JU85 1478 aa11.48□□□□□ -0.57
FAM172A-205ENST00000506398 LMTK2Q8IWU2 1503 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms