RNA–Protein interactions for RNA: ENST00000506396.1

CDH6-203, Transcript of cadherin 6, humanhuman

TSL 2

Gene CDH6, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-203ENST00000506396 CCDC27Q2M243 656 aa22.48■■□□□ 1.19
CDH6-203ENST00000506396 SMC4Q9NTJ3 1288 aa22.48■■□□□ 1.19
CDH6-203ENST00000506396 KLHL40Q2TBA0 621 aa22.47■■□□□ 1.19
CDH6-203ENST00000506396 TSR2Q969E8 191 aaKnown RBP22.47■■□□□ 1.19
CDH6-203ENST00000506396 MTHFSP49914 203 aa22.46■■□□□ 1.19
CDH6-203ENST00000506396 KANK1Q14678 1352 aa22.46■■□□□ 1.19
CDH6-203ENST00000506396 TRIM27P14373 513 aa22.46■■□□□ 1.19
CDH6-203ENST00000506396 RBM25P49756 843 aaKnown RBP22.46■■□□□ 1.19
CDH6-203ENST00000506396 SNX21Q969T3 373 aa22.46■■□□□ 1.19
CDH6-203ENST00000506396 GTPBP4Q9BZE4 634 aaKnown RBP22.45■■□□□ 1.19
CDH6-203ENST00000506396 PTPRTO14522 1441 aa22.45■■□□□ 1.18
CDH6-203ENST00000506396 SSFA2P28290 1259 aa22.45■■□□□ 1.18
CDH6-203ENST00000506396 IBTKQ9P2D0 1353 aaPredicted RBP22.45■■□□□ 1.18
CDH6-203ENST00000506396 KIF20AO95235 890 aa22.44■■□□□ 1.18
CDH6-203ENST00000506396 DDX19BQ9UMR2 479 aa22.44■■□□□ 1.18
CDH6-203ENST00000506396 ADGRF5Q8IZF2 1346 aa22.44■■□□□ 1.18
CDH6-203ENST00000506396 KIAA1210Q9ULL0 1709 aa22.44■■□□□ 1.18
CDH6-203ENST00000506396 PDLIM2Q96JY6 352 aa22.44■■□□□ 1.18
CDH6-203ENST00000506396 CFAP53Q96M91 514 aa22.44■■□□□ 1.18
CDH6-203ENST00000506396 ZBTB7CA1YPR0 619 aa22.43■■□□□ 1.18
CDH6-203ENST00000506396 RBSNQ9H1K0 784 aa22.43■■□□□ 1.18
CDH6-203ENST00000506396 SLC12A5Q9H2X9 1139 aa22.43■■□□□ 1.18
CDH6-203ENST00000506396 JARID2Q92833 1246 aaPredicted RBP22.42■■□□□ 1.18
CDH6-203ENST00000506396 U2AF1L5P0DN76 240 aaPredicted RBP22.42■■□□□ 1.18
CDH6-203ENST00000506396 U2AF1Q01081 240 aaKnown RBP eCLIP22.42■■□□□ 1.18
CDH6-203ENST00000506396 ZNF445P59923 1031 aa22.41■■□□□ 1.18
CDH6-203ENST00000506396 EXOSC9Q06265 439 aaKnown RBP22.41■■□□□ 1.18
CDH6-203ENST00000506396 CAVIN1Q6NZI2 390 aaKnown RBP22.41■■□□□ 1.18
CDH6-203ENST00000506396 ABCA6Q8N139 1617 aa22.41■■□□□ 1.18
CDH6-203ENST00000506396 ZNF518AQ6AHZ1 1483 aa22.4■■□□□ 1.18
CDH6-203ENST00000506396 TSC1Q92574 1164 aa22.4■■□□□ 1.18
CDH6-203ENST00000506396 LNPKQ9C0E8 428 aa22.4■■□□□ 1.18
CDH6-203ENST00000506396 LETM1O95202 739 aaPredicted RBP22.4■■□□□ 1.18
CDH6-203ENST00000506396 SSH1Q8WYL5 1049 aa22.4■■□□□ 1.18
CDH6-203ENST00000506396 TRAPPC8Q9Y2L5 1435 aa22.4■■□□□ 1.18
CDH6-203ENST00000506396 MCM5P33992 734 aa22.39■■□□□ 1.18
CDH6-203ENST00000506396 ATF7IPQ6VMQ6 1270 aa22.39■■□□□ 1.18
CDH6-203ENST00000506396 ZSCAN23Q3MJ62 389 aa22.39■■□□□ 1.17
CDH6-203ENST00000506396 TMEM51Q9NW97 253 aa22.38■■□□□ 1.17
CDH6-203ENST00000506396 BAG4O95429 457 aaKnown RBP22.38■■□□□ 1.17
CDH6-203ENST00000506396 MAP3K4Q9Y6R4 1608 aa22.38■■□□□ 1.17
CDH6-203ENST00000506396 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
CDH6-203ENST00000506396 TMEM57Q8N5G2 664 aa22.38■■□□□ 1.17
CDH6-203ENST00000506396 CD2BP2O95400 341 aaKnown RBP22.37■■□□□ 1.17
CDH6-203ENST00000506396 DNTTIP2Q5QJE6 756 aaKnown RBP22.37■■□□□ 1.17
CDH6-203ENST00000506396 NOB1Q9ULX3 412 aaKnown RBP22.37■■□□□ 1.17
CDH6-203ENST00000506396 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
CDH6-203ENST00000506396 PRIM1P49642 420 aaKnown RBP22.36■■□□□ 1.17
CDH6-203ENST00000506396 EFCAB2Q5VUJ9 269 aa22.36■■□□□ 1.17
CDH6-203ENST00000506396 CCDC39Q9UFE4 941 aa22.36■■□□□ 1.17
CDH6-203ENST00000506396 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
CDH6-203ENST00000506396 NUCB1Q02818 461 aa22.36■■□□□ 1.17
CDH6-203ENST00000506396 MYRIPQ8NFW9 859 aa22.36■■□□□ 1.17
CDH6-203ENST00000506396 SBNO2Q9Y2G9 1366 aa22.35■■□□□ 1.17
CDH6-203ENST00000506396 MCTP1Q6DN14 999 aa22.35■■□□□ 1.17
CDH6-203ENST00000506396 ZNF710Q8N1W2 664 aa22.35■■□□□ 1.17
CDH6-203ENST00000506396 KIF2CQ99661 725 aa22.35■■□□□ 1.17
CDH6-203ENST00000506396 ZBTB40Q9NUA8 1239 aa22.35■■□□□ 1.17
CDH6-203ENST00000506396 ATP2B3Q16720 1220 aa22.34■■□□□ 1.17
CDH6-203ENST00000506396 UGGT1Q9NYU2 1555 aa22.34■■□□□ 1.17
CDH6-203ENST00000506396 TRAK1Q9UPV9 953 aa22.34■■□□□ 1.17
CDH6-203ENST00000506396 MYOM2P54296 1465 aa22.34■■□□□ 1.17
CDH6-203ENST00000506396 VGLL3A8MV65 326 aa22.33■■□□□ 1.17
CDH6-203ENST00000506396 K7ELQ4 463 aaPredicted RBP22.33■■□□□ 1.17
CDH6-203ENST00000506396 CHD1LQ86WJ1 897 aa22.33■■□□□ 1.17
CDH6-203ENST00000506396 IPO4Q8TEX9 1081 aaKnown RBP22.33■■□□□ 1.16
CDH6-203ENST00000506396 PLCH2O75038 1416 aa22.32■■□□□ 1.16
CDH6-203ENST00000506396 AFAP1Q8N556 730 aa22.32■■□□□ 1.16
CDH6-203ENST00000506396 RBM42Q9BTD8 480 aaKnown RBP22.32■■□□□ 1.16
CDH6-203ENST00000506396 TET3O43151 1660 aa22.31■■□□□ 1.16
CDH6-203ENST00000506396 GAS2L2Q8NHY3 880 aa22.31■■□□□ 1.16
CDH6-203ENST00000506396 ABCC1P33527 1531 aa22.31■■□□□ 1.16
CDH6-203ENST00000506396 NCBP3Q53F19 620 aaKnown RBP22.31■■□□□ 1.16
CDH6-203ENST00000506396 BMP2KLQ5H9B9 411 aa22.3■■□□□ 1.16
CDH6-203ENST00000506396 CLEC17AQ6ZS10 378 aa22.3■■□□□ 1.16
CDH6-203ENST00000506396 MYO3AQ8NEV4 1616 aa22.3■■□□□ 1.16
CDH6-203ENST00000506396 PTMAP06454 111 aaKnown RBP22.29■■□□□ 1.16
CDH6-203ENST00000506396 KIAA2012Q0VF49 1180 aa22.29■■□□□ 1.16
CDH6-203ENST00000506396 SPDYE4A6NLX3 237 aa22.29■■□□□ 1.16
CDH6-203ENST00000506396 FAM177BA6PVY3 158 aa22.29■■□□□ 1.16
CDH6-203ENST00000506396 IGSF3O75054 1194 aa22.29■■□□□ 1.16
CDH6-203ENST00000506396 ADGRB2O60241 1585 aa22.29■■□□□ 1.16
CDH6-203ENST00000506396 U2SURPO15042 1029 aaKnown RBP22.28■■□□□ 1.16
CDH6-203ENST00000506396 RBM27Q9P2N5 1060 aaKnown RBP22.27■■□□□ 1.16
CDH6-203ENST00000506396 ADGRL1O94910 1474 aa22.27■■□□□ 1.16
CDH6-203ENST00000506396 TMPOP42166 694 aaKnown RBP22.27■■□□□ 1.16
CDH6-203ENST00000506396 ANKRD45Q5TZF3 282 aa22.27■■□□□ 1.15
CDH6-203ENST00000506396 TRIM35Q9UPQ4 493 aa22.27■■□□□ 1.15
CDH6-203ENST00000506396 CD109Q6YHK3 1445 aa22.26■■□□□ 1.15
CDH6-203ENST00000506396 KIF16BQ96L93 1317 aa22.26■■□□□ 1.15
CDH6-203ENST00000506396 CGNQ9P2M7 1197 aaKnown RBP22.26■■□□□ 1.15
CDH6-203ENST00000506396 KIF3BO15066 747 aa22.26■■□□□ 1.15
CDH6-203ENST00000506396 IPO8O15397 1037 aaKnown RBP22.26■■□□□ 1.15
CDH6-203ENST00000506396 TBC1D9Q6ZT07 1266 aa22.26■■□□□ 1.15
CDH6-203ENST00000506396 LMBRD1Q9NUN5 540 aa22.26■■□□□ 1.15
CDH6-203ENST00000506396 NOS1P29475 1434 aa22.25■■□□□ 1.15
CDH6-203ENST00000506396 ABCC11Q96J66 1382 aa22.25■■□□□ 1.15
CDH6-203ENST00000506396 DEPDC5O75140 1603 aa22.25■■□□□ 1.15
CDH6-203ENST00000506396 ZBTB22O15209 634 aa22.24■■□□□ 1.15
CDH6-203ENST00000506396 PRIMPOLQ96LW4 560 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms