RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 RGS17Q9UGC6 210 aaPredicted RBP23.43■■□□□ 1.34
SNCA-209ENST00000506244 NINLQ9Y2I6 1382 aa23.42■■□□□ 1.34
SNCA-209ENST00000506244 AFF2P51816 1311 aa23.41■■□□□ 1.34
SNCA-209ENST00000506244 TMF1P82094 1093 aa23.41■■□□□ 1.34
SNCA-209ENST00000506244 AKAP12Q02952 1782 aa23.41■■□□□ 1.34
SNCA-209ENST00000506244 NGLY1Q96IV0 654 aa23.4■■□□□ 1.34
SNCA-209ENST00000506244 ZNF692Q9BU19 519 aaPredicted RBP23.39■■□□□ 1.33
SNCA-209ENST00000506244 CRYBG1Q9Y4K1 1723 aa23.39■■□□□ 1.33
SNCA-209ENST00000506244 CDCA8Q53HL2 280 aa23.38■■□□□ 1.33
SNCA-209ENST00000506244 CPSF1Q10570 1443 aaKnown RBP23.37■■□□□ 1.33
SNCA-209ENST00000506244 ILDR2Q71H61 639 aa23.37■■□□□ 1.33
SNCA-209ENST00000506244 MON2Q7Z3U7 1717 aa23.36■■□□□ 1.33
SNCA-209ENST00000506244 NRKQ7Z2Y5 1582 aa23.36■■□□□ 1.33
SNCA-209ENST00000506244 PHRF1Q9P1Y6 1649 aaKnown RBP23.36■■□□□ 1.33
SNCA-209ENST00000506244 EIF4G2P78344 907 aaKnown RBP eCLIP23.35■■□□□ 1.33
SNCA-209ENST00000506244 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
SNCA-209ENST00000506244 TMC1Q8TDI8 760 aa23.35■■□□□ 1.33
SNCA-209ENST00000506244 CABLES1Q8TDN4 633 aa23.35■■□□□ 1.33
SNCA-209ENST00000506244 KTN1Q86UP2 1357 aaKnown RBP23.35■■□□□ 1.33
SNCA-209ENST00000506244 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
SNCA-209ENST00000506244 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
SNCA-209ENST00000506244 HDGFL2Q7Z4V5 671 aaPredicted RBP23.34■■□□□ 1.33
SNCA-209ENST00000506244 FNBP4Q8N3X1 1017 aaPredicted RBP23.34■■□□□ 1.33
SNCA-209ENST00000506244 SSH2Q76I76 1423 aa23.33■■□□□ 1.33
SNCA-209ENST00000506244 TERF2IPQ9NYB0 399 aa23.33■■□□□ 1.33
SNCA-209ENST00000506244 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.33■■□□□ 1.32
SNCA-209ENST00000506244 TTC21AQ8NDW8 1320 aa23.33■■□□□ 1.32
SNCA-209ENST00000506244 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
SNCA-209ENST00000506244 USP21Q9UK80 565 aa23.32■■□□□ 1.32
SNCA-209ENST00000506244 NWD2Q9ULI1 1742 aa23.31■■□□□ 1.32
SNCA-209ENST00000506244 SLIT2O94813 1529 aa23.31■■□□□ 1.32
SNCA-209ENST00000506244 PIK3C2AO00443 1686 aa23.31■■□□□ 1.32
SNCA-209ENST00000506244 PLCH1Q4KWH8 1693 aa23.31■■□□□ 1.32
SNCA-209ENST00000506244 USP19O94966 1318 aa23.31■■□□□ 1.32
SNCA-209ENST00000506244 CD163L1Q9NR16 1453 aa23.3■■□□□ 1.32
SNCA-209ENST00000506244 COL14A1Q05707 1796 aaKnown RBP23.3■■□□□ 1.32
SNCA-209ENST00000506244 EDC4Q6P2E9 1401 aaKnown RBP23.29■■□□□ 1.32
SNCA-209ENST00000506244 TTC21BQ7Z4L5 1316 aa23.29■■□□□ 1.32
SNCA-209ENST00000506244 A0A1W2PP64 1363 aa23.28■■□□□ 1.32
SNCA-209ENST00000506244 NUTM2GQ5VZR2 741 aa23.28■■□□□ 1.32
SNCA-209ENST00000506244 SLC12A5Q9H2X9 1139 aa23.28■■□□□ 1.32
SNCA-209ENST00000506244 TRPC5Q9UL62 973 aaPredicted RBP23.28■■□□□ 1.32
SNCA-209ENST00000506244 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
SNCA-209ENST00000506244 CDK12Q9NYV4 1490 aaPredicted RBP23.27■■□□□ 1.32
SNCA-209ENST00000506244 ATRNO75882 1429 aa23.26■■□□□ 1.31
SNCA-209ENST00000506244 RXRBP28702 533 aa23.26■■□□□ 1.31
SNCA-209ENST00000506244 QTRT2Q9H974 415 aaKnown RBP23.26■■□□□ 1.31
SNCA-209ENST00000506244 SLIT3O75094 1523 aa23.26■■□□□ 1.31
SNCA-209ENST00000506244 ANKRD36BQ8N2N9 1353 aa23.26■■□□□ 1.31
SNCA-209ENST00000506244 HSPA5P11021 654 aaKnown RBP23.25■■□□□ 1.31
SNCA-209ENST00000506244 NLRP6P59044 892 aa23.25■■□□□ 1.31
SNCA-209ENST00000506244 PRDM11Q9NQV5 511 aa23.25■■□□□ 1.31
SNCA-209ENST00000506244 RBM6P78332 1123 aaKnown RBP23.24■■□□□ 1.31
SNCA-209ENST00000506244 UNC5CLQ8IV45 518 aa23.24■■□□□ 1.31
SNCA-209ENST00000506244 USP54Q70EL1 1684 aa23.23■■□□□ 1.31
SNCA-209ENST00000506244 CPDO75976 1380 aa23.23■■□□□ 1.31
SNCA-209ENST00000506244 KIAA0232Q92628 1395 aa23.23■■□□□ 1.31
SNCA-209ENST00000506244 MYOM1P52179 1685 aa23.22■■□□□ 1.31
SNCA-209ENST00000506244 FAM83GA6ND36 823 aa23.21■■□□□ 1.31
SNCA-209ENST00000506244 NRAPQ86VF7 1730 aa23.21■■□□□ 1.31
SNCA-209ENST00000506244 GCP02774 474 aa23.2■■□□□ 1.3
SNCA-209ENST00000506244 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.2■■□□□ 1.3
SNCA-209ENST00000506244 USP31Q70CQ4 1352 aa23.19■■□□□ 1.3
SNCA-209ENST00000506244 SOCS7O14512 581 aa23.19■■□□□ 1.3
SNCA-209ENST00000506244 KCNH5Q8NCM2 988 aa23.19■■□□□ 1.3
SNCA-209ENST00000506244 ZC3H6P61129 1189 aaKnown RBP23.18■■□□□ 1.3
SNCA-209ENST00000506244 BTG4Q9NY30 223 aa23.18■■□□□ 1.3
SNCA-209ENST00000506244 VPS72Q15906 364 aa23.16■■□□□ 1.3
SNCA-209ENST00000506244 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
SNCA-209ENST00000506244 LMO7Q8WWI1 1683 aa23.15■■□□□ 1.3
SNCA-209ENST00000506244 RGS12O14924 1447 aa23.15■■□□□ 1.3
SNCA-209ENST00000506244 NME9Q86XW9 330 aa23.14■■□□□ 1.29
SNCA-209ENST00000506244 OVOS2A0A0J9YW53 1432 aa23.14■■□□□ 1.29
SNCA-209ENST00000506244 OVOS2Q6IE36 1432 aa23.14■■□□□ 1.29
SNCA-209ENST00000506244 NFAT5O94916 1531 aa23.13■■□□□ 1.29
SNCA-209ENST00000506244 CHRNA2Q15822 529 aa23.13■■□□□ 1.29
SNCA-209ENST00000506244 POLR3GLQ9BT43 218 aa23.13■■□□□ 1.29
SNCA-209ENST00000506244 CCDC9Q9Y3X0 531 aaKnown RBP23.13■■□□□ 1.29
SNCA-209ENST00000506244 GLI3P10071 1580 aa23.13■■□□□ 1.29
SNCA-209ENST00000506244 ABCC6O95255 1503 aa23.13■■□□□ 1.29
SNCA-209ENST00000506244 AATKQ6ZMQ8 1374 aa23.11■■□□□ 1.29
SNCA-209ENST00000506244 KIF20BQ96Q89 1820 aa23.1■■□□□ 1.29
SNCA-209ENST00000506244 NSD3Q9BZ95 1437 aa23.08■■□□□ 1.29
SNCA-209ENST00000506244 ZBTB7CA1YPR0 619 aa23.08■■□□□ 1.29
SNCA-209ENST00000506244 COG3Q96JB2 828 aa23.08■■□□□ 1.29
SNCA-209ENST00000506244 CAMTA1Q9Y6Y1 1673 aa23.08■■□□□ 1.29
SNCA-209ENST00000506244 COL5A2P05997 1499 aaPredicted RBP23.07■■□□□ 1.28
SNCA-209ENST00000506244 SOX12O15370 315 aa23.07■■□□□ 1.28
SNCA-209ENST00000506244 EVA1CP58658 441 aa23.06■■□□□ 1.28
SNCA-209ENST00000506244 ARHGEF25Q86VW2 580 aa23.06■■□□□ 1.28
SNCA-209ENST00000506244 STRN4Q9NRL3 753 aa23.06■■□□□ 1.28
SNCA-209ENST00000506244 ZRANB1Q9UGI0 708 aa23.06■■□□□ 1.28
SNCA-209ENST00000506244 SPATA31A5Q5VU36 1347 aa23.06■■□□□ 1.28
SNCA-209ENST00000506244 SPATA31A7Q8IWB4 1347 aa23.06■■□□□ 1.28
SNCA-209ENST00000506244 LTN1O94822 1766 aa23.04■■□□□ 1.28
SNCA-209ENST00000506244 COL18A1P39060 1754 aa23.04■■□□□ 1.28
SNCA-209ENST00000506244 CGNL1Q0VF96 1302 aa23.02■■□□□ 1.28
SNCA-209ENST00000506244 FYB1O15117 783 aa23.01■■□□□ 1.27
SNCA-209ENST00000506244 KIF7Q2M1P5 1343 aa23.01■■□□□ 1.27
SNCA-209ENST00000506244 SPATA31A1Q5TZJ5 1347 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms