RNA–Protein interactions for RNA: ENST00000506239.6

SMN1-205, Transcript of survival of motor neuron 1, telomeric, humanhuman

TSL 5

Gene SMN1, Length 1,550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-205ENST00000506239 PDE3BQ13370 1112 aa24.61■■□□□ 1.53
SMN1-205ENST00000506239 AATKQ6ZMQ8 1374 aa24.61■■□□□ 1.53
SMN1-205ENST00000506239 PNPLA6Q8IY17 1366 aa24.61■■□□□ 1.53
SMN1-205ENST00000506239 COG3Q96JB2 828 aa24.59■■□□□ 1.53
SMN1-205ENST00000506239 NUDCQ9Y266 331 aa24.59■■□□□ 1.53
SMN1-205ENST00000506239 TTC21AQ8NDW8 1320 aa24.58■■□□□ 1.52
SMN1-205ENST00000506239 OVOS2A0A0J9YW53 1432 aa24.58■■□□□ 1.52
SMN1-205ENST00000506239 OVOS2Q6IE36 1432 aa24.58■■□□□ 1.52
SMN1-205ENST00000506239 HSPA2P54652 639 aa24.56■■□□□ 1.52
SMN1-205ENST00000506239 PMFBP1Q8TBY8 1022 aa24.56■■□□□ 1.52
SMN1-205ENST00000506239 SENP3-EIF4A1A0A087X0R7 540 aa24.55■■□□□ 1.52
SMN1-205ENST00000506239 NGDNQ8NEJ9 315 aaKnown RBP24.55■■□□□ 1.52
SMN1-205ENST00000506239 MAP2P11137 1827 aaKnown RBP24.55■■□□□ 1.52
SMN1-205ENST00000506239 NGEFQ8N5V2 710 aa24.54■■□□□ 1.52
SMN1-205ENST00000506239 POLKQ9UBT6 870 aa24.54■■□□□ 1.52
SMN1-205ENST00000506239 ZRANB1Q9UGI0 708 aa24.54■■□□□ 1.52
SMN1-205ENST00000506239 AEBP2Q6ZN18 517 aaPredicted RBP24.54■■□□□ 1.52
SMN1-205ENST00000506239 NCOA3Q9Y6Q9 1424 aa24.53■■□□□ 1.52
SMN1-205ENST00000506239 RBM33Q96EV2 1170 aaKnown RBP24.53■■□□□ 1.52
SMN1-205ENST00000506239 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
SMN1-205ENST00000506239 STRCQ7RTU9 1775 aa24.53■■□□□ 1.52
SMN1-205ENST00000506239 PROSER2Q86WR7 435 aaPredicted RBP24.52■■□□□ 1.52
SMN1-205ENST00000506239 CDK12Q9NYV4 1490 aaPredicted RBP24.52■■□□□ 1.52
SMN1-205ENST00000506239 CCDC146Q8IYE0 955 aa24.51■■□□□ 1.51
SMN1-205ENST00000506239 USP31Q70CQ4 1352 aa24.51■■□□□ 1.51
SMN1-205ENST00000506239 ZNF521Q96K83 1311 aa24.51■■□□□ 1.51
SMN1-205ENST00000506239 SALL2Q9Y467 1007 aaPredicted RBP24.5■■□□□ 1.51
SMN1-205ENST00000506239 USP54Q70EL1 1684 aa24.5■■□□□ 1.51
SMN1-205ENST00000506239 IQSEC2Q5JU85 1478 aa24.5■■□□□ 1.51
SMN1-205ENST00000506239 PHF8Q9UPP1 1060 aa24.5■■□□□ 1.51
SMN1-205ENST00000506239 C14orf37Q86TY3 774 aa24.49■■□□□ 1.51
SMN1-205ENST00000506239 RUNDC1Q96C34 613 aa24.49■■□□□ 1.51
SMN1-205ENST00000506239 SUPT16HQ9Y5B9 1047 aaKnown RBP24.49■■□□□ 1.51
SMN1-205ENST00000506239 PIK3C2AO00443 1686 aa24.48■■□□□ 1.51
SMN1-205ENST00000506239 APAF1O14727 1248 aa24.48■■□□□ 1.51
SMN1-205ENST00000506239 LRRC7Q96NW7 1537 aa24.47■■□□□ 1.51
SMN1-205ENST00000506239 DIAPH1O60610 1272 aaKnown RBP24.47■■□□□ 1.51
SMN1-205ENST00000506239 DCCP43146 1447 aa24.47■■□□□ 1.51
SMN1-205ENST00000506239 NEFLP07196 543 aa24.46■■□□□ 1.51
SMN1-205ENST00000506239 C19orf44Q9H6X5 657 aa24.46■■□□□ 1.51
SMN1-205ENST00000506239 U2AF1L5P0DN76 240 aaPredicted RBP24.46■■□□□ 1.51
SMN1-205ENST00000506239 U2AF1Q01081 240 aaKnown RBP eCLIP24.46■■□□□ 1.51
SMN1-205ENST00000506239 FBLN1P23142 703 aa24.45■■□□□ 1.5
SMN1-205ENST00000506239 NCBP3Q53F19 620 aaKnown RBP24.45■■□□□ 1.5
SMN1-205ENST00000506239 EMILIN1Q9Y6C2 1016 aa24.45■■□□□ 1.5
SMN1-205ENST00000506239 TMEM94Q12767 1356 aa24.44■■□□□ 1.5
SMN1-205ENST00000506239 CDCA7LQ96GN5 454 aa24.42■■□□□ 1.5
SMN1-205ENST00000506239 KIF1AQ12756 1690 aa24.41■■□□□ 1.5
SMN1-205ENST00000506239 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
SMN1-205ENST00000506239 ESCO1Q5FWF5 840 aa24.41■■□□□ 1.5
SMN1-205ENST00000506239 MARF1Q9Y4F3 1742 aaKnown RBP24.41■■□□□ 1.5
SMN1-205ENST00000506239 U2SURPO15042 1029 aaKnown RBP24.4■■□□□ 1.5
SMN1-205ENST00000506239 PPM1GO15355 546 aaPredicted RBP24.4■■□□□ 1.5
SMN1-205ENST00000506239 FKBP8Q14318 412 aa24.4■■□□□ 1.5
SMN1-205ENST00000506239 RRS1Q15050 365 aaKnown RBP24.4■■□□□ 1.5
SMN1-205ENST00000506239 GOLGA2Q08379 1002 aa24.39■■□□□ 1.5
SMN1-205ENST00000506239 PLEKHF1Q96S99 279 aa24.39■■□□□ 1.5
SMN1-205ENST00000506239 RNF123Q5XPI4 1314 aa24.39■■□□□ 1.49
SMN1-205ENST00000506239 IL13P35225 146 aa24.38■■□□□ 1.49
SMN1-205ENST00000506239 TCP11L2Q8N4U5 519 aa24.38■■□□□ 1.49
SMN1-205ENST00000506239 PHF23Q9BUL5 403 aaPredicted RBP24.38■■□□□ 1.49
SMN1-205ENST00000506239 PNNQ9H307 717 aaKnown RBP24.38■■□□□ 1.49
SMN1-205ENST00000506239 CCDC27Q2M243 656 aa24.37■■□□□ 1.49
SMN1-205ENST00000506239 MST1RQ04912 1400 aa24.37■■□□□ 1.49
SMN1-205ENST00000506239 PEAK1Q9H792 1746 aa24.36■■□□□ 1.49
SMN1-205ENST00000506239 FCHSD2O94868 740 aa24.36■■□□□ 1.49
SMN1-205ENST00000506239 ORAI2Q96SN7 254 aa24.35■■□□□ 1.49
SMN1-205ENST00000506239 ATF3P18847 181 aa24.34■■□□□ 1.49
SMN1-205ENST00000506239 NLRP6P59044 892 aa24.34■■□□□ 1.49
SMN1-205ENST00000506239 SLFN5Q08AF3 891 aa24.34■■□□□ 1.49
SMN1-205ENST00000506239 WWC1Q8IX03 1113 aa24.34■■□□□ 1.49
SMN1-205ENST00000506239 TRMT2AQ8IZ69 625 aaKnown RBP24.34■■□□□ 1.49
SMN1-205ENST00000506239 XIRP1Q702N8 1843 aaKnown RBP24.34■■□□□ 1.49
SMN1-205ENST00000506239 PSME1Q06323 249 aa24.33■■□□□ 1.49
SMN1-205ENST00000506239 DUSP27Q5VZP5 1158 aa24.33■■□□□ 1.49
SMN1-205ENST00000506239 ABTB2Q8N961 1025 aa24.33■■□□□ 1.49
SMN1-205ENST00000506239 SBNO1A3KN83 1393 aa24.32■■□□□ 1.48
SMN1-205ENST00000506239 KIF24Q5T7B8 1368 aa24.32■■□□□ 1.48
SMN1-205ENST00000506239 RSPH6AQ9H0K4 717 aa24.32■■□□□ 1.48
SMN1-205ENST00000506239 MSH6P52701 1360 aa24.31■■□□□ 1.48
SMN1-205ENST00000506239 TRPM3Q9HCF6 1732 aaPredicted RBP24.31■■□□□ 1.48
SMN1-205ENST00000506239 PAK3O75914 559 aaPredicted RBP24.31■■□□□ 1.48
SMN1-205ENST00000506239 ERICH6BQ5W0A0 696 aa24.31■■□□□ 1.48
SMN1-205ENST00000506239 CADPS2Q86UW7 1296 aa24.31■■□□□ 1.48
SMN1-205ENST00000506239 MAP3K19Q56UN5 1328 aa24.3■■□□□ 1.48
SMN1-205ENST00000506239 MAPK8IP3Q9UPT6 1336 aa24.3■■□□□ 1.48
SMN1-205ENST00000506239 E9PSI1 815 aa24.3■■□□□ 1.48
SMN1-205ENST00000506239 FLT4P35916 1363 aa24.3■■□□□ 1.48
SMN1-205ENST00000506239 RCAN3Q9UKA8 241 aa24.29■■□□□ 1.48
SMN1-205ENST00000506239 WDR63Q8IWG1 891 aa24.29■■□□□ 1.48
SMN1-205ENST00000506239 EIF4A2Q14240 407 aaKnown RBP24.28■■□□□ 1.48
SMN1-205ENST00000506239 RRP7AQ9Y3A4 280 aaKnown RBP24.28■■□□□ 1.48
SMN1-205ENST00000506239 RGPD1P0DJD0 1748 aa24.27■■□□□ 1.48
SMN1-205ENST00000506239 FOXO3O43524 673 aa24.27■■□□□ 1.48
SMN1-205ENST00000506239 TMPOP42166 694 aaKnown RBP24.27■■□□□ 1.48
SMN1-205ENST00000506239 ZNF335Q9H4Z2 1342 aaPredicted RBP24.26■■□□□ 1.47
SMN1-205ENST00000506239 NFAT5O94916 1531 aa24.26■■□□□ 1.47
SMN1-205ENST00000506239 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
SMN1-205ENST00000506239 NEUROD2Q15784 382 aa24.25■■□□□ 1.47
SMN1-205ENST00000506239 SPINK5Q9NQ38 1064 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms