RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
SCLT1-207ENST00000506233 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
SCLT1-207ENST00000506233 RIMS1Q86UR5 1692 aaKnown RBP8.3□□□□□ -1.08
SCLT1-207ENST00000506233 NALCNQ8IZF0 1738 aa8.3□□□□□ -1.08
SCLT1-207ENST00000506233 FBXO22Q8NEZ5 403 aa8.3□□□□□ -1.08
SCLT1-207ENST00000506233 USP54Q70EL1 1684 aa8.3□□□□□ -1.08
SCLT1-207ENST00000506233 PROSER2Q86WR7 435 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-207ENST00000506233 BLMP54132 1417 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-207ENST00000506233 ADAMTSL3P82987 1691 aa8.29□□□□□ -1.08
SCLT1-207ENST00000506233 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-207ENST00000506233 COL3A1P02461 1466 aaPredicted RBP8.29□□□□□ -1.08
SCLT1-207ENST00000506233 DCAF11Q8TEB1 546 aa8.28□□□□□ -1.08
SCLT1-207ENST00000506233 CHMP4AQ9BY43 222 aa8.28□□□□□ -1.08
SCLT1-207ENST00000506233 KIF20BQ96Q89 1820 aa8.28□□□□□ -1.08
SCLT1-207ENST00000506233 ZNF142P52746 1687 aaPredicted RBP8.28□□□□□ -1.08
SCLT1-207ENST00000506233 RGPD8O14715 1765 aaPredicted RBP8.28□□□□□ -1.08
SCLT1-207ENST00000506233 EIF4G2P78344 907 aaKnown RBP eCLIP8.28□□□□□ -1.08
SCLT1-207ENST00000506233 XRN1Q8IZH2 1706 aaKnown RBP8.28□□□□□ -1.08
SCLT1-207ENST00000506233 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
SCLT1-207ENST00000506233 CREBZFQ9NS37 354 aa8.27□□□□□ -1.08
SCLT1-207ENST00000506233 ADGRB2O60241 1585 aa8.27□□□□□ -1.08
SCLT1-207ENST00000506233 CPS1P31327 1500 aa8.27□□□□□ -1.09
SCLT1-207ENST00000506233 FER1L4A9Z1Z3 1794 aa8.27□□□□□ -1.09
SCLT1-207ENST00000506233 CCDC102AQ96A19 550 aa8.27□□□□□ -1.09
SCLT1-207ENST00000506233 RNF123Q5XPI4 1314 aa8.27□□□□□ -1.09
SCLT1-207ENST00000506233 IQSEC2Q5JU85 1478 aa8.27□□□□□ -1.09
SCLT1-207ENST00000506233 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
SCLT1-207ENST00000506233 CARD14Q9BXL6 1004 aa8.26□□□□□ -1.09
SCLT1-207ENST00000506233 RGPD1P0DJD0 1748 aa8.26□□□□□ -1.09
SCLT1-207ENST00000506233 PCDHB8Q9UN66 801 aa8.26□□□□□ -1.09
SCLT1-207ENST00000506233 ARIH1Q9Y4X5 557 aaPredicted RBP8.26□□□□□ -1.09
SCLT1-207ENST00000506233 PCDHB13Q9Y5F0 798 aa8.26□□□□□ -1.09
SCLT1-207ENST00000506233 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
SCLT1-207ENST00000506233 CDK11BP21127 795 aaKnown RBP8.25□□□□□ -1.09
SCLT1-207ENST00000506233 ROCK2O75116 1388 aaKnown RBP8.25□□□□□ -1.09
SCLT1-207ENST00000506233 STRCP1A6NGW2 1772 aa8.25□□□□□ -1.09
SCLT1-207ENST00000506233 PLSCR2Q9NRY7 297 aa8.25□□□□□ -1.09
SCLT1-207ENST00000506233 DLC1Q96QB1 1528 aa8.25□□□□□ -1.09
SCLT1-207ENST00000506233 MS4A1P11836 297 aa8.24□□□□□ -1.09
SCLT1-207ENST00000506233 FECHP22830 423 aa8.24□□□□□ -1.09
SCLT1-207ENST00000506233 CYB5RLQ6IPT4 315 aa8.24□□□□□ -1.09
SCLT1-207ENST00000506233 PEAK1Q9H792 1746 aa8.24□□□□□ -1.09
SCLT1-207ENST00000506233 PNISRQ8TF01 805 aaKnown RBP8.24□□□□□ -1.09
SCLT1-207ENST00000506233 KIF3BO15066 747 aa8.24□□□□□ -1.09
SCLT1-207ENST00000506233 MFSD10Q14728 455 aa8.23□□□□□ -1.09
SCLT1-207ENST00000506233 FBXW7Q969H0 707 aa8.23□□□□□ -1.09
SCLT1-207ENST00000506233 ARHGAP23Q9P227 1491 aa8.23□□□□□ -1.09
SCLT1-207ENST00000506233 CAMK2BQ13554 666 aa8.23□□□□□ -1.09
SCLT1-207ENST00000506233 REPIN1Q9BWE0 567 aaKnown RBP8.23□□□□□ -1.09
SCLT1-207ENST00000506233 SLIT1O75093 1534 aa8.23□□□□□ -1.09
SCLT1-207ENST00000506233 PHF8Q9UPP1 1060 aa8.23□□□□□ -1.09
SCLT1-207ENST00000506233 SUPT16HQ9Y5B9 1047 aaKnown RBP8.23□□□□□ -1.09
SCLT1-207ENST00000506233 CRYBG1Q9Y4K1 1723 aa8.22□□□□□ -1.09
SCLT1-207ENST00000506233 CDC42BPGQ6DT37 1551 aa8.22□□□□□ -1.09
SCLT1-207ENST00000506233 HSP90B1P14625 803 aaKnown RBP8.22□□□□□ -1.09
SCLT1-207ENST00000506233 CRISPLD2Q9H0B8 497 aa8.22□□□□□ -1.09
SCLT1-207ENST00000506233 ADAMTS13Q76LX8 1427 aa8.22□□□□□ -1.09
SCLT1-207ENST00000506233 YTHDC1Q96MU7 727 aaKnown RBP8.22□□□□□ -1.09
SCLT1-207ENST00000506233 C14orf93Q9H972 538 aaKnown RBP8.22□□□□□ -1.09
SCLT1-207ENST00000506233 XIRP1Q702N8 1843 aaKnown RBP8.21□□□□□ -1.09
SCLT1-207ENST00000506233 ZNF521Q96K83 1311 aa8.21□□□□□ -1.09
SCLT1-207ENST00000506233 PUS7Q96PZ0 661 aaKnown RBP8.21□□□□□ -1.09
SCLT1-207ENST00000506233 PTPRUQ92729 1446 aa8.21□□□□□ -1.1
SCLT1-207ENST00000506233 AMHR2Q16671 573 aa8.21□□□□□ -1.1
SCLT1-207ENST00000506233 CFAP70Q5T0N1 1121 aa8.21□□□□□ -1.1
SCLT1-207ENST00000506233 CCDC97Q96F63 343 aaPredicted RBP8.21□□□□□ -1.1
SCLT1-207ENST00000506233 SERPINA10Q9UK55 444 aa8.21□□□□□ -1.1
SCLT1-207ENST00000506233 CHD2O14647 1828 aaKnown RBP8.21□□□□□ -1.1
SCLT1-207ENST00000506233 E9PSI1 815 aa8.21□□□□□ -1.1
SCLT1-207ENST00000506233 FBXO31Q5XUX0 539 aaPredicted RBP8.21□□□□□ -1.1
SCLT1-207ENST00000506233 TECPR2O15040 1411 aa8.2□□□□□ -1.1
SCLT1-207ENST00000506233 INSRP06213 1382 aa8.2□□□□□ -1.1
SCLT1-207ENST00000506233 IDI1Q13907 227 aa8.2□□□□□ -1.1
SCLT1-207ENST00000506233 USP35Q9P2H5 1018 aa8.2□□□□□ -1.1
SCLT1-207ENST00000506233 NPC1L1Q9UHC9 1359 aa8.2□□□□□ -1.1
SCLT1-207ENST00000506233 RNF39Q9H2S5 420 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 UNCXA6NJT0 531 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 DSG3P32926 999 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 EFCAB3Q8N7B9 438 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 DDX27Q96GQ7 796 aaKnown RBP8.19□□□□□ -1.1
SCLT1-207ENST00000506233 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 DLG5Q8TDM6 1919 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 CARD11Q9BXL7 1154 aa8.19□□□□□ -1.1
SCLT1-207ENST00000506233 RGL3Q3MIN7 710 aa8.18□□□□□ -1.1
SCLT1-207ENST00000506233 OXER1Q8TDS5 423 aa8.18□□□□□ -1.1
SCLT1-207ENST00000506233 NKTRP30414 1462 aaKnown RBP8.18□□□□□ -1.1
SCLT1-207ENST00000506233 PLEKHH1Q9ULM0 1364 aa8.17□□□□□ -1.1
SCLT1-207ENST00000506233 MAP2P11137 1827 aaKnown RBP8.17□□□□□ -1.1
SCLT1-207ENST00000506233 PIK3C2AO00443 1686 aa8.17□□□□□ -1.1
SCLT1-207ENST00000506233 IRF6O14896 467 aa8.17□□□□□ -1.1
SCLT1-207ENST00000506233 METP08581 1390 aa8.16□□□□□ -1.1
SCLT1-207ENST00000506233 FAM69CQ0P6D2 419 aa8.16□□□□□ -1.1
SCLT1-207ENST00000506233 MS4A4AQ96JQ5 239 aa8.16□□□□□ -1.1
SCLT1-207ENST00000506233 SMG6Q86US8 1419 aaKnown RBP8.16□□□□□ -1.1
SCLT1-207ENST00000506233 PDAP1Q13442 181 aaKnown RBP8.16□□□□□ -1.1
SCLT1-207ENST00000506233 COG6Q9Y2V7 657 aa8.16□□□□□ -1.1
SCLT1-207ENST00000506233 SSH2Q76I76 1423 aa8.15□□□□□ -1.1
SCLT1-207ENST00000506233 FMN2Q9NZ56 1722 aa8.15□□□□□ -1.1
SCLT1-207ENST00000506233 EMILIN3Q9NT22 766 aa8.15□□□□□ -1.1
SCLT1-207ENST00000506233 YTHDC2Q9H6S0 1430 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms