RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SH3BP2P78314 561 aa7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 LAPTM4AQ15012 233 aa7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 RC3H1Q5TC82 1133 aaKnown RBP7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 MRGPRX2Q96LB1 330 aa7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 WNT7AO00755 349 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 AP1G2O75843 785 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 RFC5P40937 340 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 FAM187AA6NFU0 413 aa7.95□□□□□ -1.14
HMGB1P29-201ENST00000505659 WNT7BP56706 349 aa7.95□□□□□ -1.14
HMGB1P29-201ENST00000505659 TOR4AQ9NXH8 423 aa7.95□□□□□ -1.14
HMGB1P29-201ENST00000505659 CYP4X1Q8N118 509 aa7.94□□□□□ -1.14
HMGB1P29-201ENST00000505659 ZNF511Q8NB15 262 aa7.94□□□□□ -1.14
HMGB1P29-201ENST00000505659 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
HMGB1P29-201ENST00000505659 HMX1Q9NP08 348 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P29-201ENST00000505659 J3QL48 77 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 EHBP1Q8NDI1 1231 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 EPS8L1Q8TE68 723 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 FOXJ1Q92949 421 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 TTC24A2A3L6 582 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P29-201ENST00000505659 NR6A1Q15406 480 aa7.91□□□□□ -1.14
HMGB1P29-201ENST00000505659 PKDCCQ504Y2 493 aa7.91□□□□□ -1.14
HMGB1P29-201ENST00000505659 SMPD1P17405 629 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 SNIP1Q8TAD8 396 aaKnown RBP7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 SIAH2O43255 324 aa7.89□□□□□ -1.15
HMGB1P29-201ENST00000505659 MYT1Q01538 1121 aa7.89□□□□□ -1.15
HMGB1P29-201ENST00000505659 ST8SIA5O15466 376 aa7.88□□□□□ -1.15
HMGB1P29-201ENST00000505659 DGAT1O75907 488 aa7.88□□□□□ -1.15
HMGB1P29-201ENST00000505659 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
HMGB1P29-201ENST00000505659 AGERQ15109 404 aa7.86□□□□□ -1.15
HMGB1P29-201ENST00000505659 HPS1Q92902 700 aa7.86□□□□□ -1.15
HMGB1P29-201ENST00000505659 TRIM34Q9BYJ4 488 aa7.86□□□□□ -1.15
HMGB1P29-201ENST00000505659 SH3BP5LQ7L8J4 393 aa7.85□□□□□ -1.15
HMGB1P29-201ENST00000505659 CARD14Q9BXL6 1004 aa7.85□□□□□ -1.15
HMGB1P29-201ENST00000505659 FKBPLQ9UIM3 349 aa7.85□□□□□ -1.15
HMGB1P29-201ENST00000505659 MAGEB6P1A0A0J9YX57 407 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 VARSP26640 1264 aaKnown RBP7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 TMEM259Q4ZIN3 620 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 NBPF14Q5TI25 921 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 ARMC2Q8NEN0 867 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 AVPP01185 164 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 SH3RF1Q7Z6J0 888 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 BPHLQ86WA6 291 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 GJD4Q96KN9 370 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 AAASQ9NRG9 546 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 DACH1Q9UI36 760 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 ARID5BQ14865 1188 aa7.82□□□□□ -1.16
HMGB1P29-201ENST00000505659 FAM174AQ8TBP5 190 aa7.82□□□□□ -1.16
HMGB1P29-201ENST00000505659 C1QTNF2Q9BXJ5 285 aa7.82□□□□□ -1.16
HMGB1P29-201ENST00000505659 MTMR14Q8NCE2 650 aa7.81□□□□□ -1.16
HMGB1P29-201ENST00000505659 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
HMGB1P29-201ENST00000505659 POTECB2RU33 542 aa7.8□□□□□ -1.16
HMGB1P29-201ENST00000505659 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
HMGB1P29-201ENST00000505659 AXIN1O15169 862 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 CRIPAKQ8N1N5 446 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 GPKOWQ92917 476 aaPredicted RBP eCLIP7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 ARHGAP9Q9BRR9 750 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 GPR37L1O60883 481 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 ADH1CP00326 375 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 NNTQ13423 1086 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 BANK1Q8NDB2 785 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 CDK15Q96Q40 435 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 NR3C2P08235 984 aa7.77□□□□□ -1.17
HMGB1P29-201ENST00000505659 GRM5P41594 1212 aa7.77□□□□□ -1.17
HMGB1P29-201ENST00000505659 MPNDQ8N594 471 aa7.77□□□□□ -1.17
HMGB1P29-201ENST00000505659 FSHRP23945 695 aa7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 CTC1Q2NKJ3 1217 aa7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 TRMT44Q8IYL2 757 aaKnown RBP7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 ADAM32Q8TC27 787 aa7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 PTK2Q05397 1052 aa7.75□□□□□ -1.17
HMGB1P29-201ENST00000505659 VASH1Q7L8A9 365 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P29-201ENST00000505659 ZBTB33Q86T24 672 aa7.75□□□□□ -1.17
HMGB1P29-201ENST00000505659 BMP1P13497 986 aa7.74□□□□□ -1.17
HMGB1P29-201ENST00000505659 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
HMGB1P29-201ENST00000505659 CAPN5O15484 640 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 TIMP2P16035 220 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 WDR4P57081 412 aaKnown RBP7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ZNF787Q6DD87 383 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 PNMA1Q8ND90 353 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 SLC10A4Q96EP9 437 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 KLF16Q9BXK1 252 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ATP13A2Q9NQ11 1180 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 TBC1D2BQ9UPU7 963 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 MAP4K5Q9Y4K4 846 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
HMGB1P29-201ENST00000505659 NDUFB9Q9Y6M9 179 aa7.72□□□□□ -1.17
HMGB1P29-201ENST00000505659 NR5A1Q13285 461 aa7.71□□□□□ -1.18
HMGB1P29-201ENST00000505659 TRIM46Q7Z4K8 759 aa7.71□□□□□ -1.18
HMGB1P29-201ENST00000505659 KCTD15Q96SI1 283 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms