RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 SH3BP2P78314 561 aa7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 LAPTM4AQ15012 233 aa7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 RC3H1Q5TC82 1133 aaKnown RBP7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 MRGPRX2Q96LB1 330 aa7.97□□□□□ -1.13
HMGB1P29-201ENST00000505659 WNT7AO00755 349 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 AP1G2O75843 785 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 RFC5P40937 340 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 GOPCQ9HD26 462 aa7.96□□□□□ -1.14
HMGB1P29-201ENST00000505659 FAM187AA6NFU0 413 aa7.95□□□□□ -1.14
HMGB1P29-201ENST00000505659 WNT7BP56706 349 aa7.95□□□□□ -1.14
HMGB1P29-201ENST00000505659 TOR4AQ9NXH8 423 aa7.95□□□□□ -1.14
HMGB1P29-201ENST00000505659 CYP4X1Q8N118 509 aa7.94□□□□□ -1.14
HMGB1P29-201ENST00000505659 ZNF511Q8NB15 262 aa7.94□□□□□ -1.14
HMGB1P29-201ENST00000505659 USP17L8P0C7I0 530 aa7.93□□□□□ -1.14
HMGB1P29-201ENST00000505659 HMX1Q9NP08 348 aaPredicted RBP7.93□□□□□ -1.14
HMGB1P29-201ENST00000505659 J3QL48 77 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 EHBP1Q8NDI1 1231 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 EPS8L1Q8TE68 723 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 FOXJ1Q92949 421 aa7.92□□□□□ -1.14
HMGB1P29-201ENST00000505659 TTC24A2A3L6 582 aaPredicted RBP7.91□□□□□ -1.14
HMGB1P29-201ENST00000505659 NR6A1Q15406 480 aa7.91□□□□□ -1.14
HMGB1P29-201ENST00000505659 PKDCCQ504Y2 493 aa7.91□□□□□ -1.14
HMGB1P29-201ENST00000505659 SMPD1P17405 629 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 C4orf48Q5BLP8 95 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 TRAF7Q6Q0C0 670 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 SNIP1Q8TAD8 396 aaKnown RBP7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 TLL2Q9Y6L7 1015 aa7.9□□□□□ -1.14
HMGB1P29-201ENST00000505659 SIAH2O43255 324 aa7.89□□□□□ -1.15
HMGB1P29-201ENST00000505659 MYT1Q01538 1121 aa7.89□□□□□ -1.15
HMGB1P29-201ENST00000505659 ST8SIA5O15466 376 aa7.88□□□□□ -1.15
HMGB1P29-201ENST00000505659 DGAT1O75907 488 aa7.88□□□□□ -1.15
HMGB1P29-201ENST00000505659 ALDH1A1P00352 501 aa7.88□□□□□ -1.15
HMGB1P29-201ENST00000505659 AGERQ15109 404 aa7.86□□□□□ -1.15
HMGB1P29-201ENST00000505659 HPS1Q92902 700 aa7.86□□□□□ -1.15
HMGB1P29-201ENST00000505659 TRIM34Q9BYJ4 488 aa7.86□□□□□ -1.15
HMGB1P29-201ENST00000505659 SH3BP5LQ7L8J4 393 aa7.85□□□□□ -1.15
HMGB1P29-201ENST00000505659 CARD14Q9BXL6 1004 aa7.85□□□□□ -1.15
HMGB1P29-201ENST00000505659 FKBPLQ9UIM3 349 aa7.85□□□□□ -1.15
HMGB1P29-201ENST00000505659 MAGEB6P1A0A0J9YX57 407 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 VARSP26640 1264 aaKnown RBP7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 TMEM259Q4ZIN3 620 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 NBPF14Q5TI25 921 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 ARMC2Q8NEN0 867 aa7.84□□□□□ -1.15
HMGB1P29-201ENST00000505659 AVPP01185 164 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 SH3RF1Q7Z6J0 888 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 BPHLQ86WA6 291 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 GJD4Q96KN9 370 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 OCSTAMPQ9BR26 566 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 AAASQ9NRG9 546 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 SNRKQ9NRH2 765 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 DACH1Q9UI36 760 aa7.83□□□□□ -1.16
HMGB1P29-201ENST00000505659 ARID5BQ14865 1188 aa7.82□□□□□ -1.16
HMGB1P29-201ENST00000505659 FAM174AQ8TBP5 190 aa7.82□□□□□ -1.16
HMGB1P29-201ENST00000505659 C1QTNF2Q9BXJ5 285 aa7.82□□□□□ -1.16
HMGB1P29-201ENST00000505659 MTMR14Q8NCE2 650 aa7.81□□□□□ -1.16
HMGB1P29-201ENST00000505659 WASF2Q9Y6W5 498 aa7.81□□□□□ -1.16
HMGB1P29-201ENST00000505659 POTECB2RU33 542 aa7.8□□□□□ -1.16
HMGB1P29-201ENST00000505659 ERFEQ4G0M1 354 aa7.8□□□□□ -1.16
HMGB1P29-201ENST00000505659 AXIN1O15169 862 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 CRIPAKQ8N1N5 446 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 GPKOWQ92917 476 aaPredicted RBP eCLIP7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 ARHGAP9Q9BRR9 750 aa7.79□□□□□ -1.16
HMGB1P29-201ENST00000505659 GPR37L1O60883 481 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 ADH1CP00326 375 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 NNTQ13423 1086 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 BANK1Q8NDB2 785 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 CDK15Q96Q40 435 aa7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
HMGB1P29-201ENST00000505659 NR3C2P08235 984 aa7.77□□□□□ -1.17
HMGB1P29-201ENST00000505659 GRM5P41594 1212 aa7.77□□□□□ -1.17
HMGB1P29-201ENST00000505659 MPNDQ8N594 471 aa7.77□□□□□ -1.17
HMGB1P29-201ENST00000505659 FSHRP23945 695 aa7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 CTC1Q2NKJ3 1217 aa7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 TRMT44Q8IYL2 757 aaKnown RBP7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 ADAM32Q8TC27 787 aa7.76□□□□□ -1.17
HMGB1P29-201ENST00000505659 PTK2Q05397 1052 aa7.75□□□□□ -1.17
HMGB1P29-201ENST00000505659 VASH1Q7L8A9 365 aaPredicted RBP7.75□□□□□ -1.17
HMGB1P29-201ENST00000505659 ZBTB33Q86T24 672 aa7.75□□□□□ -1.17
HMGB1P29-201ENST00000505659 BMP1P13497 986 aa7.74□□□□□ -1.17
HMGB1P29-201ENST00000505659 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
HMGB1P29-201ENST00000505659 CAPN5O15484 640 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 FBXO45P0C2W1 286 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 TIMP2P16035 220 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 WDR4P57081 412 aaKnown RBP7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ZNF787Q6DD87 383 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 PNMA1Q8ND90 353 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 SLC10A4Q96EP9 437 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 KLF16Q9BXK1 252 aaPredicted RBP7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ZFAND3Q9H8U3 227 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ATP13A2Q9NQ11 1180 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 TBC1D2BQ9UPU7 963 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 MAP4K5Q9Y4K4 846 aa7.73□□□□□ -1.17
HMGB1P29-201ENST00000505659 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
HMGB1P29-201ENST00000505659 NDUFB9Q9Y6M9 179 aa7.72□□□□□ -1.17
HMGB1P29-201ENST00000505659 NR5A1Q13285 461 aa7.71□□□□□ -1.18
HMGB1P29-201ENST00000505659 TRIM46Q7Z4K8 759 aa7.71□□□□□ -1.18
HMGB1P29-201ENST00000505659 KCTD15Q96SI1 283 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms