RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 LCE2CQ5TA81 110 aa8.55□□□□□ -1.04
CHD1-203ENST00000505657 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
CHD1-203ENST00000505657 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
CHD1-203ENST00000505657 NUTM2BA6NNL0 878 aaPredicted RBP8.54□□□□□ -1.04
CHD1-203ENST00000505657 NUTM2EB1AL46 878 aaPredicted RBP8.54□□□□□ -1.04
CHD1-203ENST00000505657 WNT7AO00755 349 aa8.54□□□□□ -1.04
CHD1-203ENST00000505657 NUTM2DQ5VT03 806 aaPredicted RBP8.54□□□□□ -1.04
CHD1-203ENST00000505657 NUTM2AQ8IVF1 878 aaPredicted RBP8.54□□□□□ -1.04
CHD1-203ENST00000505657 SNIP1Q8TAD8 396 aaKnown RBP8.54□□□□□ -1.04
CHD1-203ENST00000505657 ATP13A2Q9NQ11 1180 aa8.54□□□□□ -1.04
CHD1-203ENST00000505657 RFC5P40937 340 aa8.53□□□□□ -1.04
CHD1-203ENST00000505657 INSM1Q01101 510 aaPredicted RBP8.53□□□□□ -1.04
CHD1-203ENST00000505657 J3QL48 77 aa8.52□□□□□ -1.05
CHD1-203ENST00000505657 SPDYE5A6NIY4 337 aa8.51□□□□□ -1.05
CHD1-203ENST00000505657 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
CHD1-203ENST00000505657 DXOO77932 396 aaKnown RBP8.51□□□□□ -1.05
CHD1-203ENST00000505657 JUNDP17535 347 aa8.51□□□□□ -1.05
CHD1-203ENST00000505657 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
CHD1-203ENST00000505657 MMP16P51512 607 aa8.5□□□□□ -1.05
CHD1-203ENST00000505657 TRIM32Q13049 653 aa8.5□□□□□ -1.05
CHD1-203ENST00000505657 TSC1Q92574 1164 aa8.5□□□□□ -1.05
CHD1-203ENST00000505657 PER1O15534 1290 aaPredicted RBP8.49□□□□□ -1.05
CHD1-203ENST00000505657 HPS1Q92902 700 aa8.49□□□□□ -1.05
CHD1-203ENST00000505657 TRIM47Q96LD4 638 aa8.49□□□□□ -1.05
CHD1-203ENST00000505657 AP1G2O75843 785 aa8.48□□□□□ -1.05
CHD1-203ENST00000505657 CTDSPL2Q05D32 466 aa8.48□□□□□ -1.05
CHD1-203ENST00000505657 SENP2Q9HC62 589 aa8.48□□□□□ -1.05
CHD1-203ENST00000505657 DESI1Q6ICB0 168 aa8.46□□□□□ -1.06
CHD1-203ENST00000505657 LRRN4Q8WUT4 740 aa8.46□□□□□ -1.06
CHD1-203ENST00000505657 USP17L8P0C7I0 530 aa8.45□□□□□ -1.06
CHD1-203ENST00000505657 LYPD8Q6UX82 237 aa8.45□□□□□ -1.06
CHD1-203ENST00000505657 HELBQ8NG08 1087 aaPredicted RBP8.45□□□□□ -1.06
CHD1-203ENST00000505657 PTPRNQ16849 979 aa8.44□□□□□ -1.06
CHD1-203ENST00000505657 NUDT12Q9BQG2 462 aa8.44□□□□□ -1.06
CHD1-203ENST00000505657 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
CHD1-203ENST00000505657 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
CHD1-203ENST00000505657 SNRKQ9NRH2 765 aa8.43□□□□□ -1.06
CHD1-203ENST00000505657 MAP10Q9P2G4 905 aa8.43□□□□□ -1.06
CHD1-203ENST00000505657 F12P00748 615 aaPredicted RBP8.42□□□□□ -1.06
CHD1-203ENST00000505657 CCNYL3P0C7X3 344 aa8.42□□□□□ -1.06
CHD1-203ENST00000505657 SKOR1P84550 965 aa8.42□□□□□ -1.06
CHD1-203ENST00000505657 TMEM259Q4ZIN3 620 aa8.42□□□□□ -1.06
CHD1-203ENST00000505657 PTCRAQ6ISU1 281 aaPredicted RBP8.42□□□□□ -1.06
CHD1-203ENST00000505657 CCDC24Q8N4L8 307 aa8.42□□□□□ -1.06
CHD1-203ENST00000505657 KIFC2Q96AC6 838 aa8.42□□□□□ -1.06
CHD1-203ENST00000505657 EPS8L1Q8TE68 723 aa8.41□□□□□ -1.06
CHD1-203ENST00000505657 MTMR14Q8NCE2 650 aa8.4□□□□□ -1.06
CHD1-203ENST00000505657 KCNH2Q12809 1159 aa8.39□□□□□ -1.07
CHD1-203ENST00000505657 BANK1Q8NDB2 785 aa8.39□□□□□ -1.07
CHD1-203ENST00000505657 EVA1BQ9NVM1 165 aa8.39□□□□□ -1.07
CHD1-203ENST00000505657 ALDH1A1P00352 501 aa8.38□□□□□ -1.07
CHD1-203ENST00000505657 CTHP32929 405 aa8.38□□□□□ -1.07
CHD1-203ENST00000505657 MCM6Q14566 821 aa8.38□□□□□ -1.07
CHD1-203ENST00000505657 NR6A1Q15406 480 aa8.38□□□□□ -1.07
CHD1-203ENST00000505657 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
CHD1-203ENST00000505657 GJD4Q96KN9 370 aaPredicted RBP8.38□□□□□ -1.07
CHD1-203ENST00000505657 TRIM34Q9BYJ4 488 aa8.38□□□□□ -1.07
CHD1-203ENST00000505657 GMPRP36959 345 aa8.37□□□□□ -1.07
CHD1-203ENST00000505657 WNT7BP56706 349 aa8.37□□□□□ -1.07
CHD1-203ENST00000505657 NXF1Q9UBU9 619 aaKnown RBP8.37□□□□□ -1.07
CHD1-203ENST00000505657 GTF3C3Q9Y5Q9 886 aa8.37□□□□□ -1.07
CHD1-203ENST00000505657 UNC93B1Q9H1C4 597 aa8.36□□□□□ -1.07
CHD1-203ENST00000505657 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
CHD1-203ENST00000505657 GPR37L1O60883 481 aa8.34□□□□□ -1.07
CHD1-203ENST00000505657 TRIM46Q7Z4K8 759 aa8.34□□□□□ -1.07
CHD1-203ENST00000505657 SIAH2O43255 324 aa8.33□□□□□ -1.08
CHD1-203ENST00000505657 BMP1P13497 986 aa8.33□□□□□ -1.08
CHD1-203ENST00000505657 VEGFBP49765 207 aa8.33□□□□□ -1.08
CHD1-203ENST00000505657 LINC01559Q495D7 138 aa8.33□□□□□ -1.08
CHD1-203ENST00000505657 FAM181BA6NEQ2 426 aa8.32□□□□□ -1.08
CHD1-203ENST00000505657 ZSCAN1Q8NBB4 408 aa8.32□□□□□ -1.08
CHD1-203ENST00000505657 SOCS7O14512 581 aa8.31□□□□□ -1.08
CHD1-203ENST00000505657 BAP1Q92560 729 aa8.31□□□□□ -1.08
CHD1-203ENST00000505657 POM121Q96HA1 1249 aa8.31□□□□□ -1.08
CHD1-203ENST00000505657 TBC1D2BQ9UPU7 963 aa8.31□□□□□ -1.08
CHD1-203ENST00000505657 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
CHD1-203ENST00000505657 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
CHD1-203ENST00000505657 IRF7Q92985 503 aa8.3□□□□□ -1.08
CHD1-203ENST00000505657 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
CHD1-203ENST00000505657 SH3BP2P78314 561 aa8.29□□□□□ -1.08
CHD1-203ENST00000505657 FLIIQ13045 1269 aa8.29□□□□□ -1.08
CHD1-203ENST00000505657 NPAS3Q8IXF0 933 aa8.29□□□□□ -1.08
CHD1-203ENST00000505657 WASF2Q9Y6W5 498 aa8.29□□□□□ -1.08
CHD1-203ENST00000505657 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
CHD1-203ENST00000505657 H3BM21 787 aa8.28□□□□□ -1.08
CHD1-203ENST00000505657 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
CHD1-203ENST00000505657 FOXJ1Q92949 421 aa8.28□□□□□ -1.08
CHD1-203ENST00000505657 GDPD2Q9HCC8 539 aa8.28□□□□□ -1.08
CHD1-203ENST00000505657 COG6Q9Y2V7 657 aa8.28□□□□□ -1.08
CHD1-203ENST00000505657 NDUFB9Q9Y6M9 179 aa8.28□□□□□ -1.08
CHD1-203ENST00000505657 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
CHD1-203ENST00000505657 LOC100996750A0A140TA64 210 aa8.26□□□□□ -1.09
CHD1-203ENST00000505657 C4orf48Q5BLP8 95 aa8.26□□□□□ -1.09
CHD1-203ENST00000505657 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
CHD1-203ENST00000505657 KRTAP4-6Q9BYQ5 205 aa8.26□□□□□ -1.09
CHD1-203ENST00000505657 UBTFP17480 764 aaKnown RBP8.25□□□□□ -1.09
CHD1-203ENST00000505657 IRF5Q13568 498 aa8.25□□□□□ -1.09
CHD1-203ENST00000505657 SH3BP5LQ7L8J4 393 aa8.25□□□□□ -1.09
CHD1-203ENST00000505657 ZFP42Q96MM3 310 aa8.25□□□□□ -1.09
CHD1-203ENST00000505657 NBPF14Q5TI25 921 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms