RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 LAMC1P11047 1609 aa16.62■□□□□ 0.25
LETM1-203ENST00000505551 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
LETM1-203ENST00000505551 TNPO1Q92973 898 aaKnown RBP16.61■□□□□ 0.25
LETM1-203ENST00000505551 SPINK5Q9NQ38 1064 aaPredicted RBP16.61■□□□□ 0.25
LETM1-203ENST00000505551 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
LETM1-203ENST00000505551 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
LETM1-203ENST00000505551 MROH1Q8NDA8 1641 aa16.61■□□□□ 0.25
LETM1-203ENST00000505551 GBP4Q96PP9 640 aa16.61■□□□□ 0.25
LETM1-203ENST00000505551 SPHKAPQ2M3C7 1700 aa16.61■□□□□ 0.25
LETM1-203ENST00000505551 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
LETM1-203ENST00000505551 YEATS2Q9ULM3 1422 aa16.6■□□□□ 0.25
LETM1-203ENST00000505551 PDZRN3Q9UPQ7 1066 aa16.6■□□□□ 0.25
LETM1-203ENST00000505551 TET3O43151 1660 aa16.6■□□□□ 0.25
LETM1-203ENST00000505551 DEPDC5O75140 1603 aa16.6■□□□□ 0.25
LETM1-203ENST00000505551 NPATQ14207 1427 aa16.59■□□□□ 0.25
LETM1-203ENST00000505551 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
LETM1-203ENST00000505551 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
LETM1-203ENST00000505551 ANP32BQ92688 251 aaKnown RBP16.59■□□□□ 0.25
LETM1-203ENST00000505551 RAB3GAP1Q15042 981 aa16.58■□□□□ 0.25
LETM1-203ENST00000505551 NOL7Q9UMY1 257 aaKnown RBP16.58■□□□□ 0.25
LETM1-203ENST00000505551 E9PSI1 815 aa16.58■□□□□ 0.24
LETM1-203ENST00000505551 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
LETM1-203ENST00000505551 PPP2R1AP30153 589 aa16.58■□□□□ 0.24
LETM1-203ENST00000505551 SAFB2Q14151 953 aaKnown RBP eCLIP16.58■□□□□ 0.24
LETM1-203ENST00000505551 SMC5Q8IY18 1101 aa16.58■□□□□ 0.24
LETM1-203ENST00000505551 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
LETM1-203ENST00000505551 VWDEQ8N2E2 1590 aa16.57■□□□□ 0.24
LETM1-203ENST00000505551 NOS1P29475 1434 aa16.57■□□□□ 0.24
LETM1-203ENST00000505551 ZSCAN20P17040 1043 aaPredicted RBP16.57■□□□□ 0.24
LETM1-203ENST00000505551 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
LETM1-203ENST00000505551 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
LETM1-203ENST00000505551 FRMPD1Q5SYB0 1578 aa16.57■□□□□ 0.24
LETM1-203ENST00000505551 MLH3Q9UHC1 1453 aa16.57■□□□□ 0.24
LETM1-203ENST00000505551 FBXO31Q5XUX0 539 aaPredicted RBP16.57■□□□□ 0.24
LETM1-203ENST00000505551 CCDC94Q9BW85 323 aaPredicted RBP16.57■□□□□ 0.24
LETM1-203ENST00000505551 CEP152O94986 1710 aa16.57■□□□□ 0.24
LETM1-203ENST00000505551 PPRC1Q5VV67 1664 aaKnown RBP16.56■□□□□ 0.24
LETM1-203ENST00000505551 SNX21Q969T3 373 aa16.56■□□□□ 0.24
LETM1-203ENST00000505551 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
LETM1-203ENST00000505551 PCDHB15Q9Y5E8 787 aa16.55■□□□□ 0.24
LETM1-203ENST00000505551 MADDQ8WXG6 1647 aa16.55■□□□□ 0.24
LETM1-203ENST00000505551 IDI1Q13907 227 aa16.55■□□□□ 0.24
LETM1-203ENST00000505551 PIK3C2GO75747 1445 aa16.54■□□□□ 0.24
LETM1-203ENST00000505551 EFCAB6Q5THR3 1501 aa16.54■□□□□ 0.24
LETM1-203ENST00000505551 EIF2AK4Q9P2K8 1649 aaKnown RBP16.54■□□□□ 0.24
LETM1-203ENST00000505551 CSPP1Q1MSJ5 1256 aa16.54■□□□□ 0.24
LETM1-203ENST00000505551 PDLIM2Q96JY6 352 aa16.54■□□□□ 0.24
LETM1-203ENST00000505551 ABCA6Q8N139 1617 aa16.54■□□□□ 0.24
LETM1-203ENST00000505551 HECW2Q9P2P5 1572 aa16.54■□□□□ 0.24
LETM1-203ENST00000505551 MFAP1P55081 439 aaKnown RBP16.54■□□□□ 0.24
LETM1-203ENST00000505551 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
LETM1-203ENST00000505551 ARHGAP31Q2M1Z3 1444 aa16.53■□□□□ 0.24
LETM1-203ENST00000505551 STK26Q9P289 416 aa16.53■□□□□ 0.24
LETM1-203ENST00000505551 XPCQ01831 940 aaPredicted RBP16.53■□□□□ 0.24
LETM1-203ENST00000505551 SASS6Q6UVJ0 657 aa16.53■□□□□ 0.24
LETM1-203ENST00000505551 NEO1Q92859 1461 aa16.52■□□□□ 0.23
LETM1-203ENST00000505551 TSPOAP1O95153 1857 aa16.52■□□□□ 0.23
LETM1-203ENST00000505551 RIMBP3CA6NJZ7 1639 aa16.51■□□□□ 0.23
LETM1-203ENST00000505551 RIMBP3BA6NNM3 1639 aa16.51■□□□□ 0.23
LETM1-203ENST00000505551 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
LETM1-203ENST00000505551 RIMBP3Q9UFD9 1639 aa16.51■□□□□ 0.23
LETM1-203ENST00000505551 KLHL40Q2TBA0 621 aa16.51■□□□□ 0.23
LETM1-203ENST00000505551 MCM5P33992 734 aa16.51■□□□□ 0.23
LETM1-203ENST00000505551 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
LETM1-203ENST00000505551 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
LETM1-203ENST00000505551 ZNF445P59923 1031 aa16.5■□□□□ 0.23
LETM1-203ENST00000505551 CLEC17AQ6ZS10 378 aa16.5■□□□□ 0.23
LETM1-203ENST00000505551 GTPBP4Q9BZE4 634 aaKnown RBP16.5■□□□□ 0.23
LETM1-203ENST00000505551 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
LETM1-203ENST00000505551 KIF20AO95235 890 aa16.5■□□□□ 0.23
LETM1-203ENST00000505551 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
LETM1-203ENST00000505551 NGEFQ8N5V2 710 aa16.5■□□□□ 0.23
LETM1-203ENST00000505551 RWDD1Q9H446 243 aaPredicted RBP16.5■□□□□ 0.23
LETM1-203ENST00000505551 APAF1O14727 1248 aa16.49■□□□□ 0.23
LETM1-203ENST00000505551 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
LETM1-203ENST00000505551 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
LETM1-203ENST00000505551 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
LETM1-203ENST00000505551 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
LETM1-203ENST00000505551 PPP4R3BQ5MIZ7 849 aa16.48■□□□□ 0.23
LETM1-203ENST00000505551 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
LETM1-203ENST00000505551 CFAP74Q9C0B2 1584 aa16.48■□□□□ 0.23
LETM1-203ENST00000505551 ABCC3O15438 1527 aa16.48■□□□□ 0.23
LETM1-203ENST00000505551 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
LETM1-203ENST00000505551 MROH2AA6NES4 1674 aa16.47■□□□□ 0.23
LETM1-203ENST00000505551 VGLL3A8MV65 326 aa16.47■□□□□ 0.23
LETM1-203ENST00000505551 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
LETM1-203ENST00000505551 C14orf93Q9H972 538 aaKnown RBP16.47■□□□□ 0.23
LETM1-203ENST00000505551 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
LETM1-203ENST00000505551 HSP90AB1P08238 724 aaKnown RBP16.46■□□□□ 0.22
LETM1-203ENST00000505551 KIF1BO60333 1816 aa16.45■□□□□ 0.22
LETM1-203ENST00000505551 GOLGA6L22H0YM25 854 aa16.45■□□□□ 0.22
LETM1-203ENST00000505551 RLBP1P12271 317 aa16.45■□□□□ 0.22
LETM1-203ENST00000505551 DIP2CQ9Y2E4 1556 aa16.45■□□□□ 0.22
LETM1-203ENST00000505551 LETM1O95202 739 aaPredicted RBP16.45■□□□□ 0.22
LETM1-203ENST00000505551 DDX49Q9Y6V7 483 aaKnown RBP16.44■□□□□ 0.22
LETM1-203ENST00000505551 ASXL1Q8IXJ9 1541 aa16.44■□□□□ 0.22
LETM1-203ENST00000505551 MAP3K4Q9Y6R4 1608 aa16.44■□□□□ 0.22
LETM1-203ENST00000505551 LMTK2Q8IWU2 1503 aa16.43■□□□□ 0.22
LETM1-203ENST00000505551 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
LETM1-203ENST00000505551 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms