RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 TRIM29Q14134 588 aa20.21■□□□□ 0.83
ITGA3-204ENST00000505306 RNF20Q5VTR2 975 aa20.2■□□□□ 0.82
ITGA3-204ENST00000505306 SUPT6HQ7KZ85 1726 aaKnown RBP20.2■□□□□ 0.82
ITGA3-204ENST00000505306 REC8O95072 547 aa20.2■□□□□ 0.82
ITGA3-204ENST00000505306 IL27Q8NEV9 243 aa20.2■□□□□ 0.82
ITGA3-204ENST00000505306 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
ITGA3-204ENST00000505306 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
ITGA3-204ENST00000505306 CNNM1Q9NRU3 951 aa20.19■□□□□ 0.82
ITGA3-204ENST00000505306 IDI1Q13907 227 aa20.19■□□□□ 0.82
ITGA3-204ENST00000505306 GNAI3P08754 354 aa20.19■□□□□ 0.82
ITGA3-204ENST00000505306 HMGB2P26583 209 aaKnown RBP20.19■□□□□ 0.82
ITGA3-204ENST00000505306 NFKBIBQ15653 356 aa20.18■□□□□ 0.82
ITGA3-204ENST00000505306 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
ITGA3-204ENST00000505306 TIAM1Q13009 1591 aa20.18■□□□□ 0.82
ITGA3-204ENST00000505306 FANCAO15360 1455 aa20.18■□□□□ 0.82
ITGA3-204ENST00000505306 MYL6BP14649 208 aa20.17■□□□□ 0.82
ITGA3-204ENST00000505306 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
ITGA3-204ENST00000505306 TBC1D2BQ9UPU7 963 aa20.17■□□□□ 0.82
ITGA3-204ENST00000505306 DDX11L8A8MPP1 907 aa20.17■□□□□ 0.82
ITGA3-204ENST00000505306 CUL7Q14999 1698 aa20.17■□□□□ 0.82
ITGA3-204ENST00000505306 KIF14Q15058 1648 aa20.16■□□□□ 0.82
ITGA3-204ENST00000505306 SURF6O75683 361 aaKnown RBP20.16■□□□□ 0.82
ITGA3-204ENST00000505306 BICDL1Q6ZP65 573 aa20.15■□□□□ 0.82
ITGA3-204ENST00000505306 RALYLQ86SE5 291 aaKnown RBP20.15■□□□□ 0.82
ITGA3-204ENST00000505306 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
ITGA3-204ENST00000505306 EXOSC9Q06265 439 aaKnown RBP20.14■□□□□ 0.82
ITGA3-204ENST00000505306 UBAP1LF5GYI3 381 aa20.14■□□□□ 0.81
ITGA3-204ENST00000505306 ZNF428Q96B54 188 aa20.14■□□□□ 0.81
ITGA3-204ENST00000505306 IKQ13123 557 aaPredicted RBP20.14■□□□□ 0.81
ITGA3-204ENST00000505306 CAMSAP2Q08AD1 1489 aa20.14■□□□□ 0.81
ITGA3-204ENST00000505306 BRD4O60885 1362 aaPredicted RBP20.14■□□□□ 0.81
ITGA3-204ENST00000505306 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
ITGA3-204ENST00000505306 LNPKQ9C0E8 428 aa20.13■□□□□ 0.81
ITGA3-204ENST00000505306 GNL3LQ9NVN8 582 aaKnown RBP20.13■□□□□ 0.81
ITGA3-204ENST00000505306 MTMR7Q9Y216 660 aa20.13■□□□□ 0.81
ITGA3-204ENST00000505306 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
ITGA3-204ENST00000505306 PES1O00541 588 aaKnown RBP20.13■□□□□ 0.81
ITGA3-204ENST00000505306 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
ITGA3-204ENST00000505306 BRPF3Q9ULD4 1205 aa20.13■□□□□ 0.81
ITGA3-204ENST00000505306 CCAR1Q8IX12 1150 aaKnown RBP20.12■□□□□ 0.81
ITGA3-204ENST00000505306 CCDC43Q96MW1 224 aaKnown RBP20.12■□□□□ 0.81
ITGA3-204ENST00000505306 CADPS2Q86UW7 1296 aa20.11■□□□□ 0.81
ITGA3-204ENST00000505306 MPHOSPH8Q99549 860 aa20.11■□□□□ 0.81
ITGA3-204ENST00000505306 TOM1O60784 492 aa20.11■□□□□ 0.81
ITGA3-204ENST00000505306 PRKCSHP14314 528 aaPredicted RBP20.11■□□□□ 0.81
ITGA3-204ENST00000505306 PDE4CQ08493 712 aa20.11■□□□□ 0.81
ITGA3-204ENST00000505306 TPD52L1Q16890 204 aaPredicted RBP20.1■□□□□ 0.81
ITGA3-204ENST00000505306 FOXD4L6Q3SYB3 417 aaPredicted RBP20.1■□□□□ 0.81
ITGA3-204ENST00000505306 FOXD4L3Q6VB84 417 aaPredicted RBP20.1■□□□□ 0.81
ITGA3-204ENST00000505306 DNAJC2Q99543 621 aaKnown RBP20.1■□□□□ 0.81
ITGA3-204ENST00000505306 FSD1Q9BTV5 496 aa20.1■□□□□ 0.81
ITGA3-204ENST00000505306 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
ITGA3-204ENST00000505306 TMOD3Q9NYL9 352 aa20.1■□□□□ 0.81
ITGA3-204ENST00000505306 STARD3NLO95772 234 aa20.1■□□□□ 0.81
ITGA3-204ENST00000505306 ATP6V1DQ9Y5K8 247 aa20.1■□□□□ 0.81
ITGA3-204ENST00000505306 LRPPRCP42704 1394 aaKnown RBP20.09■□□□□ 0.81
ITGA3-204ENST00000505306 PTCD1O75127 700 aaKnown RBP20.09■□□□□ 0.81
ITGA3-204ENST00000505306 KRT28Q7Z3Y7 464 aa20.09■□□□□ 0.81
ITGA3-204ENST00000505306 TSR2Q969E8 191 aaKnown RBP20.09■□□□□ 0.81
ITGA3-204ENST00000505306 TEX14Q8IWB6 1497 aa20.08■□□□□ 0.81
ITGA3-204ENST00000505306 CEP89Q96ST8 783 aa20.08■□□□□ 0.81
ITGA3-204ENST00000505306 PRM3Q9NNZ6 103 aa20.08■□□□□ 0.81
ITGA3-204ENST00000505306 TNRQ92752 1358 aa20.08■□□□□ 0.8
ITGA3-204ENST00000505306 CCDC158Q5M9N0 1113 aa20.07■□□□□ 0.8
ITGA3-204ENST00000505306 INTS3Q68E01 1043 aaKnown RBP20.07■□□□□ 0.8
ITGA3-204ENST00000505306 SRCIN1Q9C0H9 1055 aa20.06■□□□□ 0.8
ITGA3-204ENST00000505306 RBM5P52756 815 aaKnown RBP eCLIP20.06■□□□□ 0.8
ITGA3-204ENST00000505306 CCDC57Q2TAC2 916 aa20.06■□□□□ 0.8
ITGA3-204ENST00000505306 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
ITGA3-204ENST00000505306 WASLO00401 505 aaPredicted RBP20.06■□□□□ 0.8
ITGA3-204ENST00000505306 TTC39AQ5SRH9 613 aa20.06■□□□□ 0.8
ITGA3-204ENST00000505306 GNAI2P04899 355 aa20.05■□□□□ 0.8
ITGA3-204ENST00000505306 ZPR1O75312 459 aa20.05■□□□□ 0.8
ITGA3-204ENST00000505306 GNAT3A8MTJ3 354 aa20.04■□□□□ 0.8
ITGA3-204ENST00000505306 EXOC5O00471 708 aa20.04■□□□□ 0.8
ITGA3-204ENST00000505306 MPRIPQ6WCQ1 1025 aa20.04■□□□□ 0.8
ITGA3-204ENST00000505306 ERC1Q8IUD2 1116 aa20.04■□□□□ 0.8
ITGA3-204ENST00000505306 NOC3LQ8WTT2 800 aaKnown RBP20.04■□□□□ 0.8
ITGA3-204ENST00000505306 CNTROBQ8N137 903 aa20.04■□□□□ 0.8
ITGA3-204ENST00000505306 MSH6P52701 1360 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 NME9Q86XW9 330 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 USHBP1Q8N6Y0 703 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 DDX49Q9Y6V7 483 aaKnown RBP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 NSD3Q9BZ95 1437 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 DHX29Q7Z478 1369 aaKnown RBP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 ABCC5O15440 1437 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 PCF11O94913 1555 aaKnown RBP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 SAFBQ15424 915 aaKnown RBP eCLIP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 SIL1Q9H173 461 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 SLC3A2P08195 630 aaKnown RBP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 CCDC47Q96A33 483 aaKnown RBP20.03■□□□□ 0.8
ITGA3-204ENST00000505306 NINLQ9Y2I6 1382 aa20.03■□□□□ 0.8
ITGA3-204ENST00000505306 FCHSD2O94868 740 aa20.02■□□□□ 0.8
ITGA3-204ENST00000505306 ZNF652Q9Y2D9 606 aa20.02■□□□□ 0.79
ITGA3-204ENST00000505306 SART3Q15020 963 aaKnown RBP20.01■□□□□ 0.79
ITGA3-204ENST00000505306 TNNT3P45378 269 aaPredicted RBP20.01■□□□□ 0.79
ITGA3-204ENST00000505306 PHF14O94880 888 aa20.01■□□□□ 0.79
ITGA3-204ENST00000505306 CCT4P50991 539 aaKnown RBP20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms