RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PXDNQ92626 1479 aa14.15□□□□□ -0.14
RFC1-210ENST00000505077 CRYBG1Q9Y4K1 1723 aa14.15□□□□□ -0.14
RFC1-210ENST00000505077 KTN1Q86UP2 1357 aaKnown RBP14.14□□□□□ -0.15
RFC1-210ENST00000505077 BRINP3Q76B58 766 aa14.14□□□□□ -0.15
RFC1-210ENST00000505077 ABCA3Q99758 1704 aa14.14□□□□□ -0.15
RFC1-210ENST00000505077 ACEP12821 1306 aa14.14□□□□□ -0.15
RFC1-210ENST00000505077 SHPRHQ149N8 1683 aa14.14□□□□□ -0.15
RFC1-210ENST00000505077 UBAP1LF5GYI3 381 aa14.13□□□□□ -0.15
RFC1-210ENST00000505077 NGDNQ8NEJ9 315 aaKnown RBP14.13□□□□□ -0.15
RFC1-210ENST00000505077 ORAI2Q96SN7 254 aa14.13□□□□□ -0.15
RFC1-210ENST00000505077 SLC12A5Q9H2X9 1139 aa14.13□□□□□ -0.15
RFC1-210ENST00000505077 SSH2Q76I76 1423 aa14.13□□□□□ -0.15
RFC1-210ENST00000505077 MED1Q15648 1581 aaPredicted RBP14.13□□□□□ -0.15
RFC1-210ENST00000505077 COL22A1Q8NFW1 1626 aaPredicted RBP14.12□□□□□ -0.15
RFC1-210ENST00000505077 NSD2O96028 1365 aa14.11□□□□□ -0.15
RFC1-210ENST00000505077 PMFBP1Q8TBY8 1022 aa14.11□□□□□ -0.15
RFC1-210ENST00000505077 NSD3Q9BZ95 1437 aa14.11□□□□□ -0.15
RFC1-210ENST00000505077 PHRF1Q9P1Y6 1649 aaKnown RBP14.11□□□□□ -0.15
RFC1-210ENST00000505077 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
RFC1-210ENST00000505077 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
RFC1-210ENST00000505077 PANK3Q9H999 370 aa14.1□□□□□ -0.15
RFC1-210ENST00000505077 TTC21AQ8NDW8 1320 aa14.1□□□□□ -0.15
RFC1-210ENST00000505077 TNS3Q68CZ2 1445 aa14.09□□□□□ -0.15
RFC1-210ENST00000505077 MAP2P11137 1827 aaKnown RBP14.09□□□□□ -0.15
RFC1-210ENST00000505077 PSME1Q06323 249 aa14.09□□□□□ -0.15
RFC1-210ENST00000505077 SOS2Q07890 1332 aaPredicted RBP14.09□□□□□ -0.15
RFC1-210ENST00000505077 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
RFC1-210ENST00000505077 LTN1O94822 1766 aa14.09□□□□□ -0.15
RFC1-210ENST00000505077 FOXO3O43524 673 aa14.08□□□□□ -0.16
RFC1-210ENST00000505077 KNSTRNQ9Y448 316 aa14.08□□□□□ -0.16
RFC1-210ENST00000505077 ARHGEF10O15013 1369 aa14.08□□□□□ -0.16
RFC1-210ENST00000505077 DDX10Q13206 875 aaKnown RBP14.07□□□□□ -0.16
RFC1-210ENST00000505077 OVOS2A0A0J9YW53 1432 aa14.06□□□□□ -0.16
RFC1-210ENST00000505077 OVOS2Q6IE36 1432 aa14.06□□□□□ -0.16
RFC1-210ENST00000505077 PER1O15534 1290 aaPredicted RBP14.05□□□□□ -0.16
RFC1-210ENST00000505077 KRT28Q7Z3Y7 464 aa14.05□□□□□ -0.16
RFC1-210ENST00000505077 CARD14Q9BXL6 1004 aa14.05□□□□□ -0.16
RFC1-210ENST00000505077 TTC21BQ7Z4L5 1316 aa14.05□□□□□ -0.16
RFC1-210ENST00000505077 SLIT3O75094 1523 aa14.05□□□□□ -0.16
RFC1-210ENST00000505077 PIP4K2BP78356 416 aa14.04□□□□□ -0.16
RFC1-210ENST00000505077 USP31Q70CQ4 1352 aa14.04□□□□□ -0.16
RFC1-210ENST00000505077 SPATA31A3Q5VYP0 1347 aa14.03□□□□□ -0.16
RFC1-210ENST00000505077 ABCC6O95255 1503 aa14.02□□□□□ -0.16
RFC1-210ENST00000505077 LRRC59Q96AG4 307 aaKnown RBP14.01□□□□□ -0.17
RFC1-210ENST00000505077 NFAT5O94916 1531 aa14□□□□□ -0.17
RFC1-210ENST00000505077 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
RFC1-210ENST00000505077 XPCQ01831 940 aaPredicted RBP14□□□□□ -0.17
RFC1-210ENST00000505077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14□□□□□ -0.17
RFC1-210ENST00000505077 ABTB2Q8N961 1025 aa14□□□□□ -0.17
RFC1-210ENST00000505077 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
RFC1-210ENST00000505077 USP19O94966 1318 aa13.99□□□□□ -0.17
RFC1-210ENST00000505077 FAM208AQ9UK61 1670 aaKnown RBP13.99□□□□□ -0.17
RFC1-210ENST00000505077 FYB1O15117 783 aa13.99□□□□□ -0.17
RFC1-210ENST00000505077 FBXO41Q8TF61 875 aa13.99□□□□□ -0.17
RFC1-210ENST00000505077 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
RFC1-210ENST00000505077 JCADQ9P266 1359 aa13.98□□□□□ -0.17
RFC1-210ENST00000505077 NLRP13Q86W25 1043 aa13.98□□□□□ -0.17
RFC1-210ENST00000505077 NME9Q86XW9 330 aa13.98□□□□□ -0.17
RFC1-210ENST00000505077 COG3Q96JB2 828 aa13.98□□□□□ -0.17
RFC1-210ENST00000505077 PNPLA6Q8IY17 1366 aa13.97□□□□□ -0.17
RFC1-210ENST00000505077 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
RFC1-210ENST00000505077 NWD2Q9ULI1 1742 aa13.97□□□□□ -0.17
RFC1-210ENST00000505077 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.17
RFC1-210ENST00000505077 COL14A1Q05707 1796 aaKnown RBP13.96□□□□□ -0.17
RFC1-210ENST00000505077 PLCH1Q4KWH8 1693 aa13.96□□□□□ -0.17
RFC1-210ENST00000505077 RALBP1Q15311 655 aa13.96□□□□□ -0.17
RFC1-210ENST00000505077 SMG6Q86US8 1419 aaKnown RBP13.96□□□□□ -0.18
RFC1-210ENST00000505077 KIF24Q5T7B8 1368 aa13.96□□□□□ -0.18
RFC1-210ENST00000505077 NLRP6P59044 892 aa13.95□□□□□ -0.18
RFC1-210ENST00000505077 KCNH5Q8NCM2 988 aa13.95□□□□□ -0.18
RFC1-210ENST00000505077 GGNBP2Q9H3C7 697 aa13.95□□□□□ -0.18
RFC1-210ENST00000505077 COL18A1P39060 1754 aa13.95□□□□□ -0.18
RFC1-210ENST00000505077 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
RFC1-210ENST00000505077 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
RFC1-210ENST00000505077 MORC1Q86VD1 984 aa13.94□□□□□ -0.18
RFC1-210ENST00000505077 PEAK1Q9H792 1746 aa13.94□□□□□ -0.18
RFC1-210ENST00000505077 LMO7Q8WWI1 1683 aa13.94□□□□□ -0.18
RFC1-210ENST00000505077 CDK12Q9NYV4 1490 aaPredicted RBP13.93□□□□□ -0.18
RFC1-210ENST00000505077 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.93□□□□□ -0.18
RFC1-210ENST00000505077 ANP32CO43423 234 aa13.93□□□□□ -0.18
RFC1-210ENST00000505077 CC2D1BQ5T0F9 858 aaKnown RBP13.93□□□□□ -0.18
RFC1-210ENST00000505077 RTL1A6NKG5 1358 aa13.93□□□□□ -0.18
RFC1-210ENST00000505077 CPDO75976 1380 aa13.93□□□□□ -0.18
RFC1-210ENST00000505077 SPATA31A6Q5VVP1 1343 aa13.92□□□□□ -0.18
RFC1-210ENST00000505077 HSPA1LP34931 641 aa13.92□□□□□ -0.18
RFC1-210ENST00000505077 PRKRIP1Q9H875 184 aaPredicted RBP13.92□□□□□ -0.18
RFC1-210ENST00000505077 NRAPQ86VF7 1730 aa13.9□□□□□ -0.18
RFC1-210ENST00000505077 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.19
RFC1-210ENST00000505077 GCP02774 474 aa13.89□□□□□ -0.19
RFC1-210ENST00000505077 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
RFC1-210ENST00000505077 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
RFC1-210ENST00000505077 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
RFC1-210ENST00000505077 FLT4P35916 1363 aa13.88□□□□□ -0.19
RFC1-210ENST00000505077 RGPD1P0DJD0 1748 aa13.88□□□□□ -0.19
RFC1-210ENST00000505077 HAP1P54257 671 aaPredicted RBP13.88□□□□□ -0.19
RFC1-210ENST00000505077 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
RFC1-210ENST00000505077 CAMTA1Q9Y6Y1 1673 aa13.88□□□□□ -0.19
RFC1-210ENST00000505077 WNK3Q9BYP7 1800 aa13.87□□□□□ -0.19
RFC1-210ENST00000505077 INSRP06213 1382 aa13.86□□□□□ -0.19
RFC1-210ENST00000505077 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms