RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TERF2IPQ9NYB0 399 aa14.19□□□□□ -0.14
TPM3-217ENST00000504663 ACEP12821 1306 aa14.18□□□□□ -0.14
TPM3-217ENST00000504663 OVOS2A0A0J9YW53 1432 aa14.18□□□□□ -0.14
TPM3-217ENST00000504663 OVOS2Q6IE36 1432 aa14.18□□□□□ -0.14
TPM3-217ENST00000504663 NUTM2FA1L443 756 aa14.18□□□□□ -0.14
TPM3-217ENST00000504663 PROSER2Q86WR7 435 aaPredicted RBP14.18□□□□□ -0.14
TPM3-217ENST00000504663 PPP2R1AP30153 589 aa14.17□□□□□ -0.14
TPM3-217ENST00000504663 MAPK8IP2Q13387 824 aaPredicted RBP14.17□□□□□ -0.14
TPM3-217ENST00000504663 COL3A1P02461 1466 aaPredicted RBP14.17□□□□□ -0.14
TPM3-217ENST00000504663 CGNL1Q0VF96 1302 aa14.16□□□□□ -0.14
TPM3-217ENST00000504663 FYB1O15117 783 aa14.16□□□□□ -0.14
TPM3-217ENST00000504663 CNGB1Q14028 1251 aaPredicted RBP14.16□□□□□ -0.14
TPM3-217ENST00000504663 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
TPM3-217ENST00000504663 NLRP13Q86W25 1043 aa14.15□□□□□ -0.14
TPM3-217ENST00000504663 SMG6Q86US8 1419 aaKnown RBP14.15□□□□□ -0.14
TPM3-217ENST00000504663 ALS2Q96Q42 1657 aa14.14□□□□□ -0.15
TPM3-217ENST00000504663 C19orf44Q9H6X5 657 aa14.14□□□□□ -0.15
TPM3-217ENST00000504663 TTC21BQ7Z4L5 1316 aa14.14□□□□□ -0.15
TPM3-217ENST00000504663 PMFBP1Q8TBY8 1022 aa14.13□□□□□ -0.15
TPM3-217ENST00000504663 MRS2Q9HD23 443 aa14.13□□□□□ -0.15
TPM3-217ENST00000504663 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
TPM3-217ENST00000504663 NME9Q86XW9 330 aa14.12□□□□□ -0.15
TPM3-217ENST00000504663 PNISRQ8TF01 805 aaKnown RBP14.12□□□□□ -0.15
TPM3-217ENST00000504663 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
TPM3-217ENST00000504663 GGNBP2Q9H3C7 697 aa14.12□□□□□ -0.15
TPM3-217ENST00000504663 ZRANB1Q9UGI0 708 aa14.12□□□□□ -0.15
TPM3-217ENST00000504663 CRYBG1Q9Y4K1 1723 aa14.12□□□□□ -0.15
TPM3-217ENST00000504663 USP31Q70CQ4 1352 aa14.11□□□□□ -0.15
TPM3-217ENST00000504663 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
TPM3-217ENST00000504663 DMRT2Q9Y5R5 561 aa14.11□□□□□ -0.15
TPM3-217ENST00000504663 NHSL1Q5SYE7 1610 aa14.11□□□□□ -0.15
TPM3-217ENST00000504663 MSH6P52701 1360 aa14.1□□□□□ -0.15
TPM3-217ENST00000504663 ORAI2Q96SN7 254 aa14.1□□□□□ -0.15
TPM3-217ENST00000504663 PHF8Q9UPP1 1060 aa14.1□□□□□ -0.15
TPM3-217ENST00000504663 PXDNQ92626 1479 aa14.1□□□□□ -0.15
TPM3-217ENST00000504663 BLMP54132 1417 aaPredicted RBP14.09□□□□□ -0.15
TPM3-217ENST00000504663 MORC1Q86VD1 984 aa14.09□□□□□ -0.15
TPM3-217ENST00000504663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.09□□□□□ -0.15
TPM3-217ENST00000504663 AATKQ6ZMQ8 1374 aa14.09□□□□□ -0.15
TPM3-217ENST00000504663 SLIT3O75094 1523 aa14.08□□□□□ -0.16
TPM3-217ENST00000504663 NFAT5O94916 1531 aa14.08□□□□□ -0.16
TPM3-217ENST00000504663 TTC21AQ8NDW8 1320 aa14.08□□□□□ -0.16
TPM3-217ENST00000504663 INSRP06213 1382 aa14.08□□□□□ -0.16
TPM3-217ENST00000504663 PNPLA6Q8IY17 1366 aa14.08□□□□□ -0.16
TPM3-217ENST00000504663 C14orf37Q86TY3 774 aa14.07□□□□□ -0.16
TPM3-217ENST00000504663 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
TPM3-217ENST00000504663 PHRF1Q9P1Y6 1649 aaKnown RBP14.06□□□□□ -0.16
TPM3-217ENST00000504663 MED1Q15648 1581 aaPredicted RBP14.05□□□□□ -0.16
TPM3-217ENST00000504663 FKBP8Q14318 412 aa14.05□□□□□ -0.16
TPM3-217ENST00000504663 ESCO1Q5FWF5 840 aa14.05□□□□□ -0.16
TPM3-217ENST00000504663 CADPS2Q86UW7 1296 aa14.05□□□□□ -0.16
TPM3-217ENST00000504663 NGDNQ8NEJ9 315 aaKnown RBP14.05□□□□□ -0.16
TPM3-217ENST00000504663 YTHDC1Q96MU7 727 aaKnown RBP14.05□□□□□ -0.16
TPM3-217ENST00000504663 RGPD1P0DJD0 1748 aa14.04□□□□□ -0.16
TPM3-217ENST00000504663 ABCA3Q99758 1704 aa14.04□□□□□ -0.16
TPM3-217ENST00000504663 LTN1O94822 1766 aa14.04□□□□□ -0.16
TPM3-217ENST00000504663 ATF3P18847 181 aa14.03□□□□□ -0.16
TPM3-217ENST00000504663 FBLN1P23142 703 aa14.03□□□□□ -0.16
TPM3-217ENST00000504663 ROBO1Q9Y6N7 1651 aa14.02□□□□□ -0.16
TPM3-217ENST00000504663 TNNT2P45379 298 aaPredicted RBP14.02□□□□□ -0.17
TPM3-217ENST00000504663 MTHFSP49914 203 aa14.02□□□□□ -0.17
TPM3-217ENST00000504663 BRINP3Q76B58 766 aa14.02□□□□□ -0.17
TPM3-217ENST00000504663 POLKQ9UBT6 870 aa14.02□□□□□ -0.17
TPM3-217ENST00000504663 FAM9BQ8IZU0 186 aa14.01□□□□□ -0.17
TPM3-217ENST00000504663 AHDC1Q5TGY3 1603 aaPredicted RBP14.01□□□□□ -0.17
TPM3-217ENST00000504663 IQSEC2Q5JU85 1478 aa14□□□□□ -0.17
TPM3-217ENST00000504663 SBNO1A3KN83 1393 aa14□□□□□ -0.17
TPM3-217ENST00000504663 USP19O94966 1318 aa14□□□□□ -0.17
TPM3-217ENST00000504663 FOXO3O43524 673 aa14□□□□□ -0.17
TPM3-217ENST00000504663 COG3Q96JB2 828 aa14□□□□□ -0.17
TPM3-217ENST00000504663 TNS3Q68CZ2 1445 aa13.99□□□□□ -0.17
TPM3-217ENST00000504663 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
TPM3-217ENST00000504663 EMILIN1Q9Y6C2 1016 aa13.99□□□□□ -0.17
TPM3-217ENST00000504663 XPCQ01831 940 aaPredicted RBP13.98□□□□□ -0.17
TPM3-217ENST00000504663 COL18A1P39060 1754 aa13.97□□□□□ -0.17
TPM3-217ENST00000504663 KRT28Q7Z3Y7 464 aa13.97□□□□□ -0.17
TPM3-217ENST00000504663 SLAIN2Q9P270 581 aa13.97□□□□□ -0.17
TPM3-217ENST00000504663 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
TPM3-217ENST00000504663 SOS2Q07890 1332 aaPredicted RBP13.96□□□□□ -0.17
TPM3-217ENST00000504663 NPHP3Q7Z494 1330 aa13.96□□□□□ -0.17
TPM3-217ENST00000504663 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
TPM3-217ENST00000504663 MAP3K19Q56UN5 1328 aa13.95□□□□□ -0.18
TPM3-217ENST00000504663 CAMTA1Q9Y6Y1 1673 aa13.95□□□□□ -0.18
TPM3-217ENST00000504663 COL16A1Q07092 1604 aaPredicted RBP13.95□□□□□ -0.18
TPM3-217ENST00000504663 PSME1Q06323 249 aa13.95□□□□□ -0.18
TPM3-217ENST00000504663 ZBED9Q6R2W3 1325 aa13.94□□□□□ -0.18
TPM3-217ENST00000504663 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
TPM3-217ENST00000504663 NUTM2GQ5VZR2 741 aa13.94□□□□□ -0.18
TPM3-217ENST00000504663 LMO7Q8WWI1 1683 aa13.94□□□□□ -0.18
TPM3-217ENST00000504663 KIF24Q5T7B8 1368 aa13.94□□□□□ -0.18
TPM3-217ENST00000504663 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
TPM3-217ENST00000504663 NLRP6P59044 892 aa13.93□□□□□ -0.18
TPM3-217ENST00000504663 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
TPM3-217ENST00000504663 ABTB2Q8N961 1025 aa13.93□□□□□ -0.18
TPM3-217ENST00000504663 RTL1A6NKG5 1358 aa13.93□□□□□ -0.18
TPM3-217ENST00000504663 RGPD5Q99666 1765 aa13.92□□□□□ -0.18
TPM3-217ENST00000504663 ABCC6O95255 1503 aa13.92□□□□□ -0.18
TPM3-217ENST00000504663 IL13P35225 146 aa13.92□□□□□ -0.18
TPM3-217ENST00000504663 FLT4P35916 1363 aa13.92□□□□□ -0.18
TPM3-217ENST00000504663 RGPD2P0DJD1 1756 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms