RNA–Protein interactions for RNA: ENST00000504554.1

RFC1-207, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-207ENST00000504554 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
RFC1-207ENST00000504554 SGIP1Q9BQI5 828 aa11.67□□□□□ -0.54
RFC1-207ENST00000504554 RGS17Q9UGC6 210 aaPredicted RBP11.67□□□□□ -0.54
RFC1-207ENST00000504554 PCDHB13Q9Y5F0 798 aa11.67□□□□□ -0.54
RFC1-207ENST00000504554 KNDC1Q76NI1 1749 aa11.66□□□□□ -0.54
RFC1-207ENST00000504554 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
RFC1-207ENST00000504554 TRIM26Q12899 539 aaPredicted RBP11.66□□□□□ -0.54
RFC1-207ENST00000504554 SIRT1Q96EB6 747 aa11.66□□□□□ -0.54
RFC1-207ENST00000504554 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
RFC1-207ENST00000504554 PRAM1Q96QH2 718 aa11.66□□□□□ -0.54
RFC1-207ENST00000504554 NUTM2FA1L443 756 aa11.65□□□□□ -0.54
RFC1-207ENST00000504554 SAFB2Q14151 953 aaKnown RBP eCLIP11.65□□□□□ -0.54
RFC1-207ENST00000504554 JCADQ9P266 1359 aa11.65□□□□□ -0.55
RFC1-207ENST00000504554 CDC42BPGQ6DT37 1551 aa11.64□□□□□ -0.55
RFC1-207ENST00000504554 L3MBTL2Q969R5 705 aa11.64□□□□□ -0.55
RFC1-207ENST00000504554 TRAK1Q9UPV9 953 aa11.64□□□□□ -0.55
RFC1-207ENST00000504554 LRP6O75581 1613 aa11.64□□□□□ -0.55
RFC1-207ENST00000504554 LAMC1P11047 1609 aa11.64□□□□□ -0.55
RFC1-207ENST00000504554 NBPF1Q3BBV0 1214 aa11.63□□□□□ -0.55
RFC1-207ENST00000504554 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
RFC1-207ENST00000504554 DLC1Q96QB1 1528 aa11.62□□□□□ -0.55
RFC1-207ENST00000504554 NEUROD1Q13562 356 aa11.62□□□□□ -0.55
RFC1-207ENST00000504554 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
RFC1-207ENST00000504554 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
RFC1-207ENST00000504554 ESCO1Q5FWF5 840 aa11.61□□□□□ -0.55
RFC1-207ENST00000504554 HIRIP3Q9BW71 556 aaPredicted RBP11.61□□□□□ -0.55
RFC1-207ENST00000504554 SOS2Q07890 1332 aaPredicted RBP11.6□□□□□ -0.55
RFC1-207ENST00000504554 POGKQ9P215 609 aa11.6□□□□□ -0.55
RFC1-207ENST00000504554 PNPLA6Q8IY17 1366 aa11.59□□□□□ -0.55
RFC1-207ENST00000504554 XPCQ01831 940 aaPredicted RBP11.59□□□□□ -0.55
RFC1-207ENST00000504554 POTEAQ6S8J7 498 aa11.59□□□□□ -0.55
RFC1-207ENST00000504554 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
RFC1-207ENST00000504554 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
RFC1-207ENST00000504554 PXDNQ92626 1479 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 FMN2Q9NZ56 1722 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 FOXO3O43524 673 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 LRRC59Q96AG4 307 aaKnown RBP11.58□□□□□ -0.56
RFC1-207ENST00000504554 TRIM35Q9UPQ4 493 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 COLQQ9Y215 455 aaPredicted RBP11.58□□□□□ -0.56
RFC1-207ENST00000504554 SHPRHQ149N8 1683 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 SPATA31A6Q5VVP1 1343 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 PRR36Q9H6K5 1346 aa11.58□□□□□ -0.56
RFC1-207ENST00000504554 NUTM2BA6NNL0 878 aaPredicted RBP11.57□□□□□ -0.56
RFC1-207ENST00000504554 NUTM2EB1AL46 878 aaPredicted RBP11.57□□□□□ -0.56
RFC1-207ENST00000504554 NBPF8Q3BBV2 869 aa11.57□□□□□ -0.56
RFC1-207ENST00000504554 NUTM2AQ8IVF1 878 aaPredicted RBP11.57□□□□□ -0.56
RFC1-207ENST00000504554 ADGRB2O60241 1585 aa11.56□□□□□ -0.56
RFC1-207ENST00000504554 DCAF8Q5TAQ9 597 aa11.56□□□□□ -0.56
RFC1-207ENST00000504554 USP32Q8NFA0 1604 aa11.56□□□□□ -0.56
RFC1-207ENST00000504554 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
RFC1-207ENST00000504554 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
RFC1-207ENST00000504554 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
RFC1-207ENST00000504554 WASLO00401 505 aaPredicted RBP11.54□□□□□ -0.56
RFC1-207ENST00000504554 SOCS7O14512 581 aa11.54□□□□□ -0.56
RFC1-207ENST00000504554 PMFBP1Q8TBY8 1022 aa11.54□□□□□ -0.56
RFC1-207ENST00000504554 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
RFC1-207ENST00000504554 PHF8Q9UPP1 1060 aa11.54□□□□□ -0.56
RFC1-207ENST00000504554 KIAA1210Q9ULL0 1709 aa11.54□□□□□ -0.56
RFC1-207ENST00000504554 PYGBP11216 843 aa11.53□□□□□ -0.56
RFC1-207ENST00000504554 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
RFC1-207ENST00000504554 ANKARQ7Z5J8 1434 aa11.52□□□□□ -0.56
RFC1-207ENST00000504554 SEC24BO95487 1268 aa11.52□□□□□ -0.57
RFC1-207ENST00000504554 IER5LQ5T953 404 aa11.52□□□□□ -0.57
RFC1-207ENST00000504554 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
RFC1-207ENST00000504554 KRT28Q7Z3Y7 464 aa11.52□□□□□ -0.57
RFC1-207ENST00000504554 RGPD8O14715 1765 aaPredicted RBP11.51□□□□□ -0.57
RFC1-207ENST00000504554 TULP4Q9NRJ4 1543 aa11.51□□□□□ -0.57
RFC1-207ENST00000504554 ADAMTS2O95450 1211 aa11.51□□□□□ -0.57
RFC1-207ENST00000504554 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
RFC1-207ENST00000504554 SPATA31A3Q5VYP0 1347 aa11.51□□□□□ -0.57
RFC1-207ENST00000504554 TRPM1Q7Z4N2 1603 aa11.5□□□□□ -0.57
RFC1-207ENST00000504554 POTEMA6NI47 508 aa11.5□□□□□ -0.57
RFC1-207ENST00000504554 NUDT16Q96DE0 195 aaKnown RBP11.5□□□□□ -0.57
RFC1-207ENST00000504554 C8orf37Q96NL8 207 aa11.5□□□□□ -0.57
RFC1-207ENST00000504554 PCGF6Q9BYE7 350 aa11.5□□□□□ -0.57
RFC1-207ENST00000504554 ATP7BP35670 1465 aa11.5□□□□□ -0.57
RFC1-207ENST00000504554 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
RFC1-207ENST00000504554 KIF1AQ12756 1690 aa11.49□□□□□ -0.57
RFC1-207ENST00000504554 AFF2P51816 1311 aa11.49□□□□□ -0.57
RFC1-207ENST00000504554 CENPJQ9HC77 1338 aaPredicted RBP11.49□□□□□ -0.57
RFC1-207ENST00000504554 ROCK2O75116 1388 aaKnown RBP11.48□□□□□ -0.57
RFC1-207ENST00000504554 GPRASP1Q5JY77 1395 aa11.48□□□□□ -0.57
RFC1-207ENST00000504554 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
RFC1-207ENST00000504554 SBNO1A3KN83 1393 aa11.47□□□□□ -0.57
RFC1-207ENST00000504554 TONSLQ96HA7 1378 aa11.47□□□□□ -0.57
RFC1-207ENST00000504554 PSME1Q06323 249 aa11.47□□□□□ -0.57
RFC1-207ENST00000504554 POTEGQ6S5H5 508 aa11.47□□□□□ -0.57
RFC1-207ENST00000504554 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
RFC1-207ENST00000504554 LCE2DQ5TA82 110 aaPredicted RBP11.46□□□□□ -0.57
RFC1-207ENST00000504554 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.57
RFC1-207ENST00000504554 CABP2Q9NPB3 220 aa11.46□□□□□ -0.57
RFC1-207ENST00000504554 PCDHB8Q9UN66 801 aa11.46□□□□□ -0.57
RFC1-207ENST00000504554 EIF3AQ14152 1382 aaKnown RBP11.45□□□□□ -0.58
RFC1-207ENST00000504554 TRPM3Q9HCF6 1732 aaPredicted RBP11.44□□□□□ -0.58
RFC1-207ENST00000504554 ACEP12821 1306 aa11.44□□□□□ -0.58
RFC1-207ENST00000504554 PLEKHG3A1L390 1219 aa11.44□□□□□ -0.58
RFC1-207ENST00000504554 PLCB2Q00722 1185 aa11.44□□□□□ -0.58
RFC1-207ENST00000504554 LMOD2Q6P5Q4 547 aa11.44□□□□□ -0.58
RFC1-207ENST00000504554 FNBP4Q8N3X1 1017 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms